RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 CFAP47Q6ZTR5 3102 aa9.3□□□□□ -0.92
PDS5A-201ENST00000303538 KRTAP10-8P60410 259 aa9.29□□□□□ -0.92
PDS5A-201ENST00000303538 ASB16-AS1Q495Z4 193 aa9.29□□□□□ -0.92
PDS5A-201ENST00000303538 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
PDS5A-201ENST00000303538 APCP25054 2843 aa9.28□□□□□ -0.92
PDS5A-201ENST00000303538 KALRNO60229 2985 aa9.27□□□□□ -0.93
PDS5A-201ENST00000303538 ASH1LQ9NR48 2969 aaKnown RBP9.25□□□□□ -0.93
PDS5A-201ENST00000303538 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
PDS5A-201ENST00000303538 KRTAP16-1A8MUX0 517 aa9.21□□□□□ -0.93
PDS5A-201ENST00000303538 KRTAP25-1Q3LHN0 102 aa9.21□□□□□ -0.94
PDS5A-201ENST00000303538 UTP20O75691 2785 aaKnown RBP9.21□□□□□ -0.94
PDS5A-201ENST00000303538 LAMA1P25391 3075 aa9.21□□□□□ -0.94
PDS5A-201ENST00000303538 ITPR1Q14643 2758 aa9.21□□□□□ -0.94
PDS5A-201ENST00000303538 HIVEP1P15822 2718 aa9.19□□□□□ -0.94
PDS5A-201ENST00000303538 WDFY3Q8IZQ1 3526 aa9.14□□□□□ -0.95
PDS5A-201ENST00000303538 FLNCQ14315 2725 aa9.13□□□□□ -0.95
PDS5A-201ENST00000303538 KRTAP21-3Q3LHN1 58 aa9.13□□□□□ -0.95
PDS5A-201ENST00000303538 NDUFAF8A1L188 74 aa9.13□□□□□ -0.95
PDS5A-201ENST00000303538 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
PDS5A-201ENST00000303538 TENM4Q6N022 2769 aa9.11□□□□□ -0.95
PDS5A-201ENST00000303538 FRYLO94915 3013 aa9.09□□□□□ -0.95
PDS5A-201ENST00000303538 KRTAP13-1Q8IUC0 172 aa9.09□□□□□ -0.95
PDS5A-201ENST00000303538 COL12A1Q99715 3063 aa9.07□□□□□ -0.96
PDS5A-201ENST00000303538 LRBAP50851 2863 aa9.05□□□□□ -0.96
PDS5A-201ENST00000303538 BOD1L1Q8NFC6 3051 aa9.05□□□□□ -0.96
PDS5A-201ENST00000303538 ATMQ13315 3056 aa9.03□□□□□ -0.96
PDS5A-201ENST00000303538 NBPF19A0A087WUL8 3843 aa9.02□□□□□ -0.97
PDS5A-201ENST00000303538 XP32Q5T750 250 aa9□□□□□ -0.97
PDS5A-201ENST00000303538 CELSR2Q9HCU4 2923 aa8.96□□□□□ -0.97
PDS5A-201ENST00000303538 A6NN06 94 aa8.95□□□□□ -0.98
PDS5A-201ENST00000303538 DCHS1Q96JQ0 3298 aa8.89□□□□□ -0.99
PDS5A-201ENST00000303538 TENM1Q9UKZ4 2725 aa8.86□□□□□ -0.99
PDS5A-201ENST00000303538 PRO2289Q9P1D8 64 aa8.85□□□□□ -0.99
PDS5A-201ENST00000303538 ADGRG4Q8IZF6 3080 aa8.85□□□□□ -0.99
PDS5A-201ENST00000303538 LAMA5O15230 3695 aa8.81□□□□□ -1
PDS5A-201ENST00000303538 KRTAP1-4P0C5Y4 121 aa8.79□□□□□ -1
PDS5A-201ENST00000303538 ZZEF1O43149 2961 aa8.79□□□□□ -1
PDS5A-201ENST00000303538 DCHS2Q6V1P9 2916 aa8.79□□□□□ -1
PDS5A-201ENST00000303538 TPRXLQ17RH7 258 aa8.77□□□□□ -1.01
PDS5A-201ENST00000303538 LOC400499M0QZD8 3231 aa8.77□□□□□ -1.01
PDS5A-201ENST00000303538 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
PDS5A-201ENST00000303538 NF1P21359 2839 aa8.71□□□□□ -1.01
PDS5A-201ENST00000303538 TENM3Q9P273 2699 aa8.71□□□□□ -1.02
PDS5A-201ENST00000303538 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
PDS5A-201ENST00000303538 TNRC18O15417 2968 aaPredicted RBP8.68□□□□□ -1.02
PDS5A-201ENST00000303538 TENM2Q9NT68 2774 aa8.63□□□□□ -1.03
PDS5A-201ENST00000303538 ZFHX4Q86UP3 3567 aa8.63□□□□□ -1.03
PDS5A-201ENST00000303538 P0C880 135 aa8.61□□□□□ -1.03
PDS5A-201ENST00000303538 NIPBLQ6KC79 2804 aaeCLIP8.61□□□□□ -1.03
PDS5A-201ENST00000303538 H0YAA0 97 aa8.6□□□□□ -1.03
PDS5A-201ENST00000303538 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
PDS5A-201ENST00000303538 DMDP11532 3685 aa8.56□□□□□ -1.04
PDS5A-201ENST00000303538 PKD1L1Q8TDX9 2849 aa8.56□□□□□ -1.04
PDS5A-201ENST00000303538 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
PDS5A-201ENST00000303538 CELSR1Q9NYQ6 3014 aa8.49□□□□□ -1.05
PDS5A-201ENST00000303538 DMXL1Q9Y485 3027 aa8.47□□□□□ -1.05
PDS5A-201ENST00000303538 RELNP78509 3460 aa8.46□□□□□ -1.06
PDS5A-201ENST00000303538 VWFP04275 2813 aa8.45□□□□□ -1.06
PDS5A-201ENST00000303538 ZANQ9Y493 2812 aa8.44□□□□□ -1.06
PDS5A-201ENST00000303538 SPENQ96T58 3664 aaKnown RBP8.43□□□□□ -1.06
PDS5A-201ENST00000303538 PDZD2O15018 2839 aa8.43□□□□□ -1.06
PDS5A-201ENST00000303538 FBN2P35556 2912 aa8.41□□□□□ -1.06
PDS5A-201ENST00000303538 TGP01266 2768 aa8.38□□□□□ -1.07
PDS5A-201ENST00000303538 CRCT1Q9UGL9 99 aa8.24□□□□□ -1.09
PDS5A-201ENST00000303538 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
PDS5A-201ENST00000303538 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
PDS5A-201ENST00000303538 ZFHX3Q15911 3703 aa8.13□□□□□ -1.11
PDS5A-201ENST00000303538 HRNRQ86YZ3 2850 aaPredicted RBP8.12□□□□□ -1.11
PDS5A-201ENST00000303538 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
PDS5A-201ENST00000303538 SRRM2Q9UQ35 2752 aaKnown RBP8.09□□□□□ -1.11
PDS5A-201ENST00000303538 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
PDS5A-201ENST00000303538 KRTAP13-4Q3LI77 160 aa8.06□□□□□ -1.12
PDS5A-201ENST00000303538 MXRA5Q9NR99 2828 aa8□□□□□ -1.13
PDS5A-201ENST00000303538 CSMD2Q7Z408 3487 aa7.99□□□□□ -1.13
PDS5A-201ENST00000303538 KRTAP12-1P59990 96 aa7.96□□□□□ -1.13
PDS5A-201ENST00000303538 CUBNO60494 3623 aa7.95□□□□□ -1.14
PDS5A-201ENST00000303538 MUC3AQ02505 3323 aa7.87□□□□□ -1.15
PDS5A-201ENST00000303538 BSNQ9UPA5 3926 aa7.84□□□□□ -1.15
PDS5A-201ENST00000303538 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
PDS5A-201ENST00000303538 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
PDS5A-201ENST00000303538 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
PDS5A-201ENST00000303538 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
PDS5A-201ENST00000303538 FBN1P35555 2871 aaKnown RBP7.75□□□□□ -1.17
PDS5A-201ENST00000303538 ANK3Q12955 4377 aaKnown RBP7.74□□□□□ -1.17
PDS5A-201ENST00000303538 FBN3Q75N90 2809 aa7.73□□□□□ -1.17
PDS5A-201ENST00000303538 MEGF8Q7Z7M0 2845 aa7.66□□□□□ -1.18
PDS5A-201ENST00000303538 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.19
PDS5A-201ENST00000303538 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
PDS5A-201ENST00000303538 AKAP9Q99996 3911 aa7.59□□□□□ -1.19
PDS5A-201ENST00000303538 CSMD3Q7Z407 3707 aa7.53□□□□□ -1.2
PDS5A-201ENST00000303538 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
PDS5A-201ENST00000303538 TRRAPQ9Y4A5 3859 aa7.52□□□□□ -1.2
PDS5A-201ENST00000303538 MT1HL1P0DM35 61 aa7.52□□□□□ -1.21
PDS5A-201ENST00000303538 HUWE1Q7Z6Z7 4374 aaKnown RBP7.5□□□□□ -1.21
PDS5A-201ENST00000303538 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
PDS5A-201ENST00000303538 OTOGQ6ZRI0 2925 aa7.34□□□□□ -1.23
PDS5A-201ENST00000303538 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
PDS5A-201ENST00000303538 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
PDS5A-201ENST00000303538 ZNF469Q96JG9 3925 aaPredicted RBP7.25□□□□□ -1.25
PDS5A-201ENST00000303538 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms