RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
SCN11A-201ENST00000302328 Q5VV11 94 aa4.54□□□□□ -1.68
SCN11A-201ENST00000302328 STAB1Q9NY15 2570 aa4.53□□□□□ -1.68
SCN11A-201ENST00000302328 COL12A1Q99715 3063 aa4.53□□□□□ -1.68
SCN11A-201ENST00000302328 NSD1Q96L73 2696 aaPredicted RBP4.52□□□□□ -1.69
SCN11A-201ENST00000302328 BOD1L1Q8NFC6 3051 aa4.52□□□□□ -1.69
SCN11A-201ENST00000302328 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
SCN11A-201ENST00000302328 MYO15AQ9UKN7 3530 aa4.52□□□□□ -1.69
SCN11A-201ENST00000302328 ITPR1Q14643 2758 aa4.5□□□□□ -1.69
SCN11A-201ENST00000302328 TNP1P09430 55 aa4.5□□□□□ -1.69
SCN11A-201ENST00000302328 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
SCN11A-201ENST00000302328 ASPMQ8IZT6 3477 aa4.49□□□□□ -1.69
SCN11A-201ENST00000302328 SPEGQ15772 3267 aa4.49□□□□□ -1.69
SCN11A-201ENST00000302328 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
SCN11A-201ENST00000302328 NBEAL1Q6ZS30 2694 aa4.48□□□□□ -1.69
SCN11A-201ENST00000302328 NBEAQ8NFP9 2946 aa4.48□□□□□ -1.69
SCN11A-201ENST00000302328 ANK3Q12955 4377 aaKnown RBP4.46□□□□□ -1.69
SCN11A-201ENST00000302328 NBEAL2Q6ZNJ1 2754 aa4.46□□□□□ -1.7
SCN11A-201ENST00000302328 A8MU10 97 aa4.46□□□□□ -1.7
SCN11A-201ENST00000302328 NOTCH1P46531 2555 aa4.46□□□□□ -1.7
SCN11A-201ENST00000302328 CFAP47Q6ZTR5 3102 aa4.44□□□□□ -1.7
SCN11A-201ENST00000302328 KALRNO60229 2985 aa4.42□□□□□ -1.7
SCN11A-201ENST00000302328 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
SCN11A-201ENST00000302328 FLNCQ14315 2725 aa4.41□□□□□ -1.7
SCN11A-201ENST00000302328 ADGRG4Q8IZF6 3080 aa4.4□□□□□ -1.7
SCN11A-201ENST00000302328 HRNRQ86YZ3 2850 aaPredicted RBP4.38□□□□□ -1.71
SCN11A-201ENST00000302328 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
SCN11A-201ENST00000302328 TACC2O95359 2948 aa4.37□□□□□ -1.71
SCN11A-201ENST00000302328 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
SCN11A-201ENST00000302328 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
SCN11A-201ENST00000302328 PDZD2O15018 2839 aa4.33□□□□□ -1.72
SCN11A-201ENST00000302328 LOC400499M0QZD8 3231 aa4.32□□□□□ -1.72
SCN11A-201ENST00000302328 DMBT1Q9UGM3 2413 aaPredicted RBP4.32□□□□□ -1.72
SCN11A-201ENST00000302328 CELSR2Q9HCU4 2923 aa4.31□□□□□ -1.72
SCN11A-201ENST00000302328 WDFY3Q8IZQ1 3526 aa4.31□□□□□ -1.72
SCN11A-201ENST00000302328 STAB2Q8WWQ8 2551 aa4.31□□□□□ -1.72
SCN11A-201ENST00000302328 ZZEF1O43149 2961 aa4.31□□□□□ -1.72
SCN11A-201ENST00000302328 DMDP11532 3685 aa4.3□□□□□ -1.72
SCN11A-201ENST00000302328 FBN2P35556 2912 aa4.29□□□□□ -1.72
SCN11A-201ENST00000302328 RELNP78509 3460 aa4.28□□□□□ -1.72
SCN11A-201ENST00000302328 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
SCN11A-201ENST00000302328 NIPBLQ6KC79 2804 aaeCLIP4.26□□□□□ -1.73
SCN11A-201ENST00000302328 FLG2Q5D862 2391 aaPredicted RBP4.25□□□□□ -1.73
SCN11A-201ENST00000302328 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
SCN11A-201ENST00000302328 LAMA5O15230 3695 aa4.24□□□□□ -1.73
SCN11A-201ENST00000302328 BSNQ9UPA5 3926 aa4.24□□□□□ -1.73
SCN11A-201ENST00000302328 HUWE1Q7Z6Z7 4374 aaKnown RBP4.23□□□□□ -1.73
SCN11A-201ENST00000302328 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
SCN11A-201ENST00000302328 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
SCN11A-201ENST00000302328 ASH1LQ9NR48 2969 aaKnown RBP4.22□□□□□ -1.73
SCN11A-201ENST00000302328 KRTAP4-5Q9BYR2 181 aa4.2□□□□□ -1.74
SCN11A-201ENST00000302328 CELSR1Q9NYQ6 3014 aa4.19□□□□□ -1.74
SCN11A-201ENST00000302328 P0C880 135 aa4.17□□□□□ -1.74
SCN11A-201ENST00000302328 DCHS2Q6V1P9 2916 aa4.17□□□□□ -1.74
SCN11A-201ENST00000302328 NF1P21359 2839 aa4.17□□□□□ -1.74
SCN11A-201ENST00000302328 DCHS1Q96JQ0 3298 aa4.16□□□□□ -1.74
SCN11A-201ENST00000302328 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
SCN11A-201ENST00000302328 ZFHX4Q86UP3 3567 aa4.16□□□□□ -1.74
SCN11A-201ENST00000302328 ZANQ9Y493 2812 aa4.14□□□□□ -1.75
SCN11A-201ENST00000302328 A6NN06 94 aa4.13□□□□□ -1.75
SCN11A-201ENST00000302328 OTOGQ6ZRI0 2925 aa4.13□□□□□ -1.75
SCN11A-201ENST00000302328 H0YAA0 97 aa4.11□□□□□ -1.75
SCN11A-201ENST00000302328 AKAP9Q99996 3911 aa4.11□□□□□ -1.75
SCN11A-201ENST00000302328 MXRA5Q9NR99 2828 aa4.1□□□□□ -1.75
SCN11A-201ENST00000302328 ZFHX3Q15911 3703 aa4.1□□□□□ -1.75
SCN11A-201ENST00000302328 SPENQ96T58 3664 aaKnown RBP4.1□□□□□ -1.75
SCN11A-201ENST00000302328 FBN1P35555 2871 aaKnown RBP4.1□□□□□ -1.75
SCN11A-201ENST00000302328 TENM1Q9UKZ4 2725 aa4.09□□□□□ -1.75
SCN11A-201ENST00000302328 CSMD1Q96PZ7 3565 aa4.05□□□□□ -1.76
SCN11A-201ENST00000302328 SMG1Q96Q15 3661 aaKnown RBP4.03□□□□□ -1.76
SCN11A-201ENST00000302328 KRTAP10-4P60372 401 aaPredicted RBP4.01□□□□□ -1.77
SCN11A-201ENST00000302328 MUC3AQ02505 3323 aa4□□□□□ -1.77
SCN11A-201ENST00000302328 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
SCN11A-201ENST00000302328 CSMD2Q7Z408 3487 aa3.99□□□□□ -1.77
SCN11A-201ENST00000302328 DNAH9Q9NYC9 4486 aa3.98□□□□□ -1.77
SCN11A-201ENST00000302328 TRRAPQ9Y4A5 3859 aa3.98□□□□□ -1.77
SCN11A-201ENST00000302328 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
SCN11A-201ENST00000302328 TENM3Q9P273 2699 aa3.95□□□□□ -1.78
SCN11A-201ENST00000302328 DNAH1Q9P2D7 4330 aa3.95□□□□□ -1.78
SCN11A-201ENST00000302328 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
SCN11A-201ENST00000302328 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
SCN11A-201ENST00000302328 H3BS24 57 aa3.9□□□□□ -1.78
SCN11A-201ENST00000302328 PKD1L1Q8TDX9 2849 aa3.9□□□□□ -1.79
SCN11A-201ENST00000302328 VPS13CQ709C8 3753 aa3.9□□□□□ -1.79
SCN11A-201ENST00000302328 VWFP04275 2813 aa3.89□□□□□ -1.79
SCN11A-201ENST00000302328 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
SCN11A-201ENST00000302328 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
SCN11A-201ENST00000302328 SVEP1Q4LDE5 3571 aa3.88□□□□□ -1.79
SCN11A-201ENST00000302328 DNAH3Q8TD57 4116 aa3.82□□□□□ -1.8
SCN11A-201ENST00000302328 ZNF469Q96JG9 3925 aaPredicted RBP3.82□□□□□ -1.8
SCN11A-201ENST00000302328 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
SCN11A-201ENST00000302328 TGP01266 2768 aa3.81□□□□□ -1.8
SCN11A-201ENST00000302328 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
SCN11A-201ENST00000302328 CMYA5Q8N3K9 4069 aa3.78□□□□□ -1.8
SCN11A-201ENST00000302328 DNAH6Q9C0G6 4158 aa3.78□□□□□ -1.8
SCN11A-201ENST00000302328 CUBNO60494 3623 aa3.78□□□□□ -1.8
SCN11A-201ENST00000302328 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
SCN11A-201ENST00000302328 ANK2Q01484 3957 aa3.76□□□□□ -1.81
SCN11A-201ENST00000302328 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
SCN11A-201ENST00000302328 LORP23490 312 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms