RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 A0A1B0GVX0 72 aa7.39□□□□□ -1.23
CCDC7-202ENST00000302316 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
CCDC7-202ENST00000302316 TNXBP22105 4242 aa7.38□□□□□ -1.23
CCDC7-202ENST00000302316 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
CCDC7-202ENST00000302316 ATOX1O00244 68 aa7.37□□□□□ -1.23
CCDC7-202ENST00000302316 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
CCDC7-202ENST00000302316 WFDC13Q8IUB5 93 aa7.36□□□□□ -1.23
CCDC7-202ENST00000302316 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
CCDC7-202ENST00000302316 PCP4P48539 62 aa7.35□□□□□ -1.23
CCDC7-202ENST00000302316 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
CCDC7-202ENST00000302316 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
CCDC7-202ENST00000302316 CASC2Q6XLA1 102 aa7.34□□□□□ -1.23
CCDC7-202ENST00000302316 OXTP01178 125 aa7.33□□□□□ -1.24
CCDC7-202ENST00000302316 HERC2O95714 4834 aa7.32□□□□□ -1.24
CCDC7-202ENST00000302316 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
CCDC7-202ENST00000302316 KRTAP29-1A8MX34 341 aaPredicted RBP7.31□□□□□ -1.24
CCDC7-202ENST00000302316 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
CCDC7-202ENST00000302316 RETNLBQ9BQ08 111 aa7.31□□□□□ -1.24
CCDC7-202ENST00000302316 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
CCDC7-202ENST00000302316 SMIM20Q8N5G0 67 aa7.29□□□□□ -1.24
CCDC7-202ENST00000302316 LINC00313P59037 77 aa7.27□□□□□ -1.25
CCDC7-202ENST00000302316 SERP2Q8N6R1 65 aa7.27□□□□□ -1.25
CCDC7-202ENST00000302316 TRAV7A0A075B6U4 112 aa7.26□□□□□ -1.25
CCDC7-202ENST00000302316 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
CCDC7-202ENST00000302316 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
CCDC7-202ENST00000302316 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
CCDC7-202ENST00000302316 MRPL34Q9BQ48 92 aaKnown RBP7.25□□□□□ -1.25
CCDC7-202ENST00000302316 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
CCDC7-202ENST00000302316 COX7CP15954 63 aa7.24□□□□□ -1.25
CCDC7-202ENST00000302316 NDUFS5O43920 106 aa7.22□□□□□ -1.25
CCDC7-202ENST00000302316 UQCRQO14949 82 aa7.21□□□□□ -1.26
CCDC7-202ENST00000302316 CCDC179H3BU77 68 aa7.2□□□□□ -1.26
CCDC7-202ENST00000302316 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
CCDC7-202ENST00000302316 FP248Q71RG6 208 aaPredicted RBP7.19□□□□□ -1.26
CCDC7-202ENST00000302316 C9orf92A6NGG3 77 aa7.19□□□□□ -1.26
CCDC7-202ENST00000302316 KRTAP3-3Q9BYR6 98 aa7.17□□□□□ -1.26
CCDC7-202ENST00000302316 KRTAP3-2Q9BYR7 98 aa7.17□□□□□ -1.26
CCDC7-202ENST00000302316 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
CCDC7-202ENST00000302316 Q8N9P0 234 aaPredicted RBP7.16□□□□□ -1.26
CCDC7-202ENST00000302316 C20orf197Q8N268 126 aa7.15□□□□□ -1.26
CCDC7-202ENST00000302316 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.27
CCDC7-202ENST00000302316 C5orf47Q569G3 176 aa7.13□□□□□ -1.27
CCDC7-202ENST00000302316 PRR4Q16378 134 aa7.13□□□□□ -1.27
CCDC7-202ENST00000302316 TRAV22A0A0B4J277 110 aa7.12□□□□□ -1.27
CCDC7-202ENST00000302316 H0Y9P7 68 aa7.12□□□□□ -1.27
CCDC7-202ENST00000302316 MP68P56378 58 aa7.11□□□□□ -1.27
CCDC7-202ENST00000302316 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
CCDC7-202ENST00000302316 H3BS24 57 aa7.1□□□□□ -1.27
CCDC7-202ENST00000302316 KLKP1Q107X0 134 aa7.09□□□□□ -1.28
CCDC7-202ENST00000302316 A0A0U1RQV1 116 aa7.08□□□□□ -1.28
CCDC7-202ENST00000302316 KRTAP13-3Q3SY46 172 aa7.07□□□□□ -1.28
CCDC7-202ENST00000302316 Q5W150 140 aa7.07□□□□□ -1.28
CCDC7-202ENST00000302316 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
CCDC7-202ENST00000302316 LINC00208Q96KT6 92 aa7.07□□□□□ -1.28
CCDC7-202ENST00000302316 CYSTM1Q9H1C7 97 aa7.07□□□□□ -1.28
CCDC7-202ENST00000302316 A8MUU9 505 aa7.06□□□□□ -1.28
CCDC7-202ENST00000302316 H3BPC8 53 aa7.05□□□□□ -1.28
CCDC7-202ENST00000302316 C1orf64Q8NEQ6 169 aa7.04□□□□□ -1.28
CCDC7-202ENST00000302316 ZCCHC13Q8WW36 166 aaKnown RBP7.03□□□□□ -1.28
CCDC7-202ENST00000302316 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
CCDC7-202ENST00000302316 XP32Q5T750 250 aa7.02□□□□□ -1.29
CCDC7-202ENST00000302316 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
CCDC7-202ENST00000302316 Q75L30 129 aa7.02□□□□□ -1.29
CCDC7-202ENST00000302316 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
CCDC7-202ENST00000302316 NDUFC1O43677 76 aa7□□□□□ -1.29
CCDC7-202ENST00000302316 LOC101927531A0A1B0GV80 90 aa6.98□□□□□ -1.29
CCDC7-202ENST00000302316 H7BZZ5 65 aa6.98□□□□□ -1.29
CCDC7-202ENST00000302316 RPL37P61927 97 aaKnown RBP6.97□□□□□ -1.29
CCDC7-202ENST00000302316 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
CCDC7-202ENST00000302316 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
CCDC7-202ENST00000302316 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
CCDC7-202ENST00000302316 PCOTHQ58A44 107 aa6.94□□□□□ -1.3
CCDC7-202ENST00000302316 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
CCDC7-202ENST00000302316 LPAP08519 4548 aa6.93□□□□□ -1.3
CCDC7-202ENST00000302316 TMEM258P61165 79 aa6.93□□□□□ -1.3
CCDC7-202ENST00000302316 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.3
CCDC7-202ENST00000302316 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
CCDC7-202ENST00000302316 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
CCDC7-202ENST00000302316 HERC1Q15751 4861 aa6.87□□□□□ -1.31
CCDC7-202ENST00000302316 LRP2P98164 4655 aa6.87□□□□□ -1.31
CCDC7-202ENST00000302316 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
CCDC7-202ENST00000302316 SPINK7P58062 85 aa6.84□□□□□ -1.31
CCDC7-202ENST00000302316 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
CCDC7-202ENST00000302316 HRES1P13985 223 aa6.83□□□□□ -1.32
CCDC7-202ENST00000302316 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
CCDC7-202ENST00000302316 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
CCDC7-202ENST00000302316 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
CCDC7-202ENST00000302316 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
CCDC7-202ENST00000302316 DMAC1Q96GE9 116 aa6.71□□□□□ -1.33
CCDC7-202ENST00000302316 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.34
CCDC7-202ENST00000302316 SEC61GP60059 68 aa6.7□□□□□ -1.34
CCDC7-202ENST00000302316 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
CCDC7-202ENST00000302316 ACYP2P14621 99 aa6.67□□□□□ -1.34
CCDC7-202ENST00000302316 COX6B2Q6YFQ2 88 aa6.66□□□□□ -1.34
CCDC7-202ENST00000302316 COA5Q86WW8 74 aa6.66□□□□□ -1.34
CCDC7-202ENST00000302316 A8MUN3 132 aa6.65□□□□□ -1.34
CCDC7-202ENST00000302316 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.35
CCDC7-202ENST00000302316 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
CCDC7-202ENST00000302316 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
CCDC7-202ENST00000302316 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms