RNA–Protein interactions for RNA: ENST00000300843.8

MARK4-202, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 1 (best) BASIC

Gene MARK4, Length 5,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-202ENST00000300843 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
MARK4-202ENST00000300843 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
MARK4-202ENST00000300843 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
MARK4-202ENST00000300843 A6NN06 94 aa8.82□□□□□ -1
MARK4-202ENST00000300843 HIVEP1P15822 2718 aa8.82□□□□□ -1
MARK4-202ENST00000300843 LOC400499M0QZD8 3231 aa8.82□□□□□ -1
MARK4-202ENST00000300843 UTP20O75691 2785 aaKnown RBP8.81□□□□□ -1
MARK4-202ENST00000300843 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
MARK4-202ENST00000300843 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
MARK4-202ENST00000300843 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
MARK4-202ENST00000300843 KRTAP13-1Q8IUC0 172 aa8.79□□□□□ -1
MARK4-202ENST00000300843 SPTBN5Q9NRC6 3674 aaKnown RBP8.78□□□□□ -1
MARK4-202ENST00000300843 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
MARK4-202ENST00000300843 TNRC18O15417 2968 aaPredicted RBP8.75□□□□□ -1.01
MARK4-202ENST00000300843 USP34Q70CQ2 3546 aa8.74□□□□□ -1.01
MARK4-202ENST00000300843 KRTAP13-2Q52LG2 175 aa8.72□□□□□ -1.01
MARK4-202ENST00000300843 ZANQ9Y493 2812 aa8.72□□□□□ -1.01
MARK4-202ENST00000300843 APCP25054 2843 aa8.71□□□□□ -1.01
MARK4-202ENST00000300843 ADM2Q7Z4H4 148 aa8.71□□□□□ -1.01
MARK4-202ENST00000300843 DMXL1Q9Y485 3027 aa8.71□□□□□ -1.02
MARK4-202ENST00000300843 NIPBLQ6KC79 2804 aaeCLIP8.68□□□□□ -1.02
MARK4-202ENST00000300843 CELSR2Q9HCU4 2923 aa8.67□□□□□ -1.02
MARK4-202ENST00000300843 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
MARK4-202ENST00000300843 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
MARK4-202ENST00000300843 TENM4Q6N022 2769 aa8.62□□□□□ -1.03
MARK4-202ENST00000300843 DCHS1Q96JQ0 3298 aa8.59□□□□□ -1.03
MARK4-202ENST00000300843 FBN2P35556 2912 aa8.55□□□□□ -1.04
MARK4-202ENST00000300843 NF1P21359 2839 aa8.55□□□□□ -1.04
MARK4-202ENST00000300843 HRNRQ86YZ3 2850 aaPredicted RBP8.52□□□□□ -1.05
MARK4-202ENST00000300843 A8MUU9 505 aa8.51□□□□□ -1.05
MARK4-202ENST00000300843 DCHS2Q6V1P9 2916 aa8.49□□□□□ -1.05
MARK4-202ENST00000300843 C20orf166-AS1Q96NR2 134 aa8.48□□□□□ -1.05
MARK4-202ENST00000300843 CRYBG3Q68DQ2 2970 aa8.47□□□□□ -1.05
MARK4-202ENST00000300843 NDUFAF8A1L188 74 aa8.44□□□□□ -1.06
MARK4-202ENST00000300843 A8MU10 97 aa8.42□□□□□ -1.06
MARK4-202ENST00000300843 ASPMQ8IZT6 3477 aa8.38□□□□□ -1.07
MARK4-202ENST00000300843 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
MARK4-202ENST00000300843 ZFHX4Q86UP3 3567 aa8.35□□□□□ -1.07
MARK4-202ENST00000300843 RELNP78509 3460 aa8.35□□□□□ -1.07
MARK4-202ENST00000300843 TNP1P09430 55 aa8.3□□□□□ -1.08
MARK4-202ENST00000300843 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
MARK4-202ENST00000300843 CSMD1Q96PZ7 3565 aa8.22□□□□□ -1.09
MARK4-202ENST00000300843 TENM3Q9P273 2699 aa8.21□□□□□ -1.09
MARK4-202ENST00000300843 XP32Q5T750 250 aa8.21□□□□□ -1.09
MARK4-202ENST00000300843 LAMA5O15230 3695 aa8.21□□□□□ -1.09
MARK4-202ENST00000300843 TPRXLQ17RH7 258 aa8.19□□□□□ -1.1
MARK4-202ENST00000300843 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
MARK4-202ENST00000300843 PRO2289Q9P1D8 64 aa8.12□□□□□ -1.11
MARK4-202ENST00000300843 SMG1Q96Q15 3661 aaKnown RBP8.11□□□□□ -1.11
MARK4-202ENST00000300843 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
MARK4-202ENST00000300843 MUC3AQ02505 3323 aa8.09□□□□□ -1.11
MARK4-202ENST00000300843 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
MARK4-202ENST00000300843 DMDP11532 3685 aa8.06□□□□□ -1.12
MARK4-202ENST00000300843 TENM2Q9NT68 2774 aa8.05□□□□□ -1.12
MARK4-202ENST00000300843 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
MARK4-202ENST00000300843 CUBNO60494 3623 aa8.02□□□□□ -1.13
MARK4-202ENST00000300843 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
MARK4-202ENST00000300843 SVEP1Q4LDE5 3571 aa7.98□□□□□ -1.13
MARK4-202ENST00000300843 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
MARK4-202ENST00000300843 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.13
MARK4-202ENST00000300843 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
MARK4-202ENST00000300843 PDZD2O15018 2839 aa7.92□□□□□ -1.14
MARK4-202ENST00000300843 P0C880 135 aa7.9□□□□□ -1.14
MARK4-202ENST00000300843 H0YAA0 97 aa7.88□□□□□ -1.15
MARK4-202ENST00000300843 VWFP04275 2813 aa7.82□□□□□ -1.16
MARK4-202ENST00000300843 PKD1L1Q8TDX9 2849 aa7.82□□□□□ -1.16
MARK4-202ENST00000300843 TGP01266 2768 aa7.8□□□□□ -1.16
MARK4-202ENST00000300843 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.16
MARK4-202ENST00000300843 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
MARK4-202ENST00000300843 OTOGQ6ZRI0 2925 aa7.71□□□□□ -1.18
MARK4-202ENST00000300843 NBPF19A0A087WUL8 3843 aa7.58□□□□□ -1.2
MARK4-202ENST00000300843 ZFHX3Q15911 3703 aa7.55□□□□□ -1.2
MARK4-202ENST00000300843 CSMD2Q7Z408 3487 aa7.54□□□□□ -1.2
MARK4-202ENST00000300843 SRRM2Q9UQ35 2752 aaKnown RBP7.51□□□□□ -1.21
MARK4-202ENST00000300843 ANK3Q12955 4377 aaKnown RBP7.5□□□□□ -1.21
MARK4-202ENST00000300843 FBN3Q75N90 2809 aa7.46□□□□□ -1.22
MARK4-202ENST00000300843 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
MARK4-202ENST00000300843 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
MARK4-202ENST00000300843 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
MARK4-202ENST00000300843 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
MARK4-202ENST00000300843 TRRAPQ9Y4A5 3859 aa7.27□□□□□ -1.25
MARK4-202ENST00000300843 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
MARK4-202ENST00000300843 BSNQ9UPA5 3926 aa7.25□□□□□ -1.25
MARK4-202ENST00000300843 MEGF8Q7Z7M0 2845 aa7.25□□□□□ -1.25
MARK4-202ENST00000300843 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
MARK4-202ENST00000300843 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
MARK4-202ENST00000300843 VPS13CQ709C8 3753 aa7.14□□□□□ -1.27
MARK4-202ENST00000300843 KRTAP10-4P60372 401 aaPredicted RBP7.14□□□□□ -1.27
MARK4-202ENST00000300843 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
MARK4-202ENST00000300843 HUWE1Q7Z6Z7 4374 aaKnown RBP7.05□□□□□ -1.28
MARK4-202ENST00000300843 INE1O15225 51 aa7.04□□□□□ -1.28
MARK4-202ENST00000300843 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
MARK4-202ENST00000300843 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
MARK4-202ENST00000300843 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.29
MARK4-202ENST00000300843 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
MARK4-202ENST00000300843 ALMS1Q8TCU4 4167 aa6.89□□□□□ -1.31
MARK4-202ENST00000300843 ZNF469Q96JG9 3925 aaPredicted RBP6.78□□□□□ -1.32
MARK4-202ENST00000300843 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
MARK4-202ENST00000300843 DNAH9Q9NYC9 4486 aa6.73□□□□□ -1.33
MARK4-202ENST00000300843 AKAP9Q99996 3911 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms