RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 BAHCC1Q9P281 2608 aa9.03□□□□□ -0.96
RUNX1-201ENST00000300305 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
RUNX1-201ENST00000300305 ITPR2Q14571 2701 aa9.01□□□□□ -0.97
RUNX1-201ENST00000300305 CRYBG3Q68DQ2 2970 aa9.01□□□□□ -0.97
RUNX1-201ENST00000300305 COL12A1Q99715 3063 aa9□□□□□ -0.97
RUNX1-201ENST00000300305 ADGRG4Q8IZF6 3080 aa9□□□□□ -0.97
RUNX1-201ENST00000300305 STAB2Q8WWQ8 2551 aa9□□□□□ -0.97
RUNX1-201ENST00000300305 NBEAQ8NFP9 2946 aa9□□□□□ -0.97
RUNX1-201ENST00000300305 ASH1LQ9NR48 2969 aaKnown RBP8.99□□□□□ -0.97
RUNX1-201ENST00000300305 ASB16-AS1Q495Z4 193 aa8.95□□□□□ -0.98
RUNX1-201ENST00000300305 ITPR1Q14643 2758 aa8.95□□□□□ -0.98
RUNX1-201ENST00000300305 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.99
RUNX1-201ENST00000300305 UTP20O75691 2785 aaKnown RBP8.89□□□□□ -0.99
RUNX1-201ENST00000300305 TNP1P09430 55 aa8.89□□□□□ -0.99
RUNX1-201ENST00000300305 NSD1Q96L73 2696 aaPredicted RBP8.89□□□□□ -0.99
RUNX1-201ENST00000300305 USP34Q70CQ2 3546 aa8.88□□□□□ -0.99
RUNX1-201ENST00000300305 EYSQ5T1H1 3165 aa8.87□□□□□ -0.99
RUNX1-201ENST00000300305 APCP25054 2843 aa8.87□□□□□ -0.99
RUNX1-201ENST00000300305 HIVEP1P15822 2718 aa8.86□□□□□ -0.99
RUNX1-201ENST00000300305 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
RUNX1-201ENST00000300305 RPS29P62273 56 aaKnown RBP8.84□□□□□ -0.99
RUNX1-201ENST00000300305 MYO15AQ9UKN7 3530 aa8.82□□□□□ -1
RUNX1-201ENST00000300305 ZZEF1O43149 2961 aa8.79□□□□□ -1
RUNX1-201ENST00000300305 FLNCQ14315 2725 aa8.72□□□□□ -1.01
RUNX1-201ENST00000300305 CELSR2Q9HCU4 2923 aa8.67□□□□□ -1.02
RUNX1-201ENST00000300305 DMXL1Q9Y485 3027 aa8.63□□□□□ -1.03
RUNX1-201ENST00000300305 H0YAA0 97 aa8.63□□□□□ -1.03
RUNX1-201ENST00000300305 XP32Q5T750 250 aa8.62□□□□□ -1.03
RUNX1-201ENST00000300305 KMT2BQ9UMN6 2715 aaPredicted RBP8.61□□□□□ -1.03
RUNX1-201ENST00000300305 LOC400499M0QZD8 3231 aa8.61□□□□□ -1.03
RUNX1-201ENST00000300305 WDFY3Q8IZQ1 3526 aa8.57□□□□□ -1.04
RUNX1-201ENST00000300305 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
RUNX1-201ENST00000300305 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
RUNX1-201ENST00000300305 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
RUNX1-201ENST00000300305 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
RUNX1-201ENST00000300305 ASPMQ8IZT6 3477 aa8.51□□□□□ -1.05
RUNX1-201ENST00000300305 TENM4Q6N022 2769 aa8.5□□□□□ -1.05
RUNX1-201ENST00000300305 DCHS1Q96JQ0 3298 aa8.47□□□□□ -1.05
RUNX1-201ENST00000300305 P0C880 135 aa8.47□□□□□ -1.05
RUNX1-201ENST00000300305 ZANQ9Y493 2812 aa8.45□□□□□ -1.06
RUNX1-201ENST00000300305 HRNRQ86YZ3 2850 aaPredicted RBP8.41□□□□□ -1.06
RUNX1-201ENST00000300305 RELNP78509 3460 aa8.4□□□□□ -1.06
RUNX1-201ENST00000300305 FBN2P35556 2912 aa8.39□□□□□ -1.07
RUNX1-201ENST00000300305 KRTAP21-3Q3LHN1 58 aa8.38□□□□□ -1.07
RUNX1-201ENST00000300305 ZFHX4Q86UP3 3567 aa8.37□□□□□ -1.07
RUNX1-201ENST00000300305 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
RUNX1-201ENST00000300305 NIPBLQ6KC79 2804 aaeCLIP8.36□□□□□ -1.077e-6■■□□□ 12.9
RUNX1-201ENST00000300305 CELSR1Q9NYQ6 3014 aa8.27□□□□□ -1.09
RUNX1-201ENST00000300305 CSMD1Q96PZ7 3565 aa8.26□□□□□ -1.09
RUNX1-201ENST00000300305 NF1P21359 2839 aa8.25□□□□□ -1.09
RUNX1-201ENST00000300305 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
RUNX1-201ENST00000300305 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
RUNX1-201ENST00000300305 LAMA5O15230 3695 aa8.22□□□□□ -1.09
RUNX1-201ENST00000300305 NBPF19A0A087WUL8 3843 aa8.2□□□□□ -1.1
RUNX1-201ENST00000300305 TENM1Q9UKZ4 2725 aa8.2□□□□□ -1.1
RUNX1-201ENST00000300305 KRTAP13-3Q3SY46 172 aa8.19□□□□□ -1.1
RUNX1-201ENST00000300305 TENM2Q9NT68 2774 aa8.19□□□□□ -1.1
RUNX1-201ENST00000300305 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
RUNX1-201ENST00000300305 TGP01266 2768 aa8.04□□□□□ -1.12
RUNX1-201ENST00000300305 DMDP11532 3685 aa8.04□□□□□ -1.12
RUNX1-201ENST00000300305 SMG1Q96Q15 3661 aaKnown RBP8.01□□□□□ -1.13
RUNX1-201ENST00000300305 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
RUNX1-201ENST00000300305 PKD1L1Q8TDX9 2849 aa7.99□□□□□ -1.13
RUNX1-201ENST00000300305 MXRA5Q9NR99 2828 aa7.97□□□□□ -1.13
RUNX1-201ENST00000300305 VWFP04275 2813 aa7.94□□□□□ -1.14
RUNX1-201ENST00000300305 SVEP1Q4LDE5 3571 aa7.91□□□□□ -1.14
RUNX1-201ENST00000300305 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
RUNX1-201ENST00000300305 CUBNO60494 3623 aa7.85□□□□□ -1.15
RUNX1-201ENST00000300305 MUC3AQ02505 3323 aa7.84□□□□□ -1.15
RUNX1-201ENST00000300305 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
RUNX1-201ENST00000300305 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
RUNX1-201ENST00000300305 KRTAP15-1Q3LI76 137 aa7.81□□□□□ -1.16
RUNX1-201ENST00000300305 CRCT1Q9UGL9 99 aa7.8□□□□□ -1.16
RUNX1-201ENST00000300305 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
RUNX1-201ENST00000300305 SPENQ96T58 3664 aaKnown RBP7.76□□□□□ -1.17
RUNX1-201ENST00000300305 CSMD2Q7Z408 3487 aa7.74□□□□□ -1.17
RUNX1-201ENST00000300305 PDZD2O15018 2839 aa7.73□□□□□ -1.17
RUNX1-201ENST00000300305 FBN1P35555 2871 aaKnown RBP7.66□□□□□ -1.18
RUNX1-201ENST00000300305 ANK3Q12955 4377 aaKnown RBP7.66□□□□□ -1.18
RUNX1-201ENST00000300305 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
RUNX1-201ENST00000300305 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
RUNX1-201ENST00000300305 OTOGQ6ZRI0 2925 aa7.49□□□□□ -1.21
RUNX1-201ENST00000300305 FBN3Q75N90 2809 aa7.45□□□□□ -1.22
RUNX1-201ENST00000300305 SRRM2Q9UQ35 2752 aaKnown RBP7.43□□□□□ -1.22
RUNX1-201ENST00000300305 BSNQ9UPA5 3926 aa7.39□□□□□ -1.23
RUNX1-201ENST00000300305 MEGF8Q7Z7M0 2845 aa7.38□□□□□ -1.23
RUNX1-201ENST00000300305 VPS13CQ709C8 3753 aa7.34□□□□□ -1.24
RUNX1-201ENST00000300305 HUWE1Q7Z6Z7 4374 aaKnown RBP7.31□□□□□ -1.24
RUNX1-201ENST00000300305 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
RUNX1-201ENST00000300305 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
RUNX1-201ENST00000300305 COL7A1Q02388 2944 aa7.29□□□□□ -1.24
RUNX1-201ENST00000300305 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
RUNX1-201ENST00000300305 CSMD3Q7Z407 3707 aa7.27□□□□□ -1.25
RUNX1-201ENST00000300305 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
RUNX1-201ENST00000300305 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
RUNX1-201ENST00000300305 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
RUNX1-201ENST00000300305 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
RUNX1-201ENST00000300305 INE1O15225 51 aa7.07□□□□□ -1.28
RUNX1-201ENST00000300305 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
RUNX1-201ENST00000300305 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms