RNA–Protein interactions for RNA: ENST00000299314.11

GNPTAB-201, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPTAB, Length 5,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-201ENST00000299314 A0A1B0GVY2 172 aa12.61□□□□□ -0.39
GNPTAB-201ENST00000299314 KMT2BQ9UMN6 2715 aaPredicted RBP12.59□□□□□ -0.39
GNPTAB-201ENST00000299314 UTP20O75691 2785 aaKnown RBP12.55□□□□□ -0.4
GNPTAB-201ENST00000299314 CDH23Q9H251 3354 aa12.52□□□□□ -0.41
GNPTAB-201ENST00000299314 LRBAP50851 2863 aa12.49□□□□□ -0.41
GNPTAB-201ENST00000299314 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
GNPTAB-201ENST00000299314 KRTAP21-3Q3LHN1 58 aa12.45□□□□□ -0.42
GNPTAB-201ENST00000299314 TACC2O95359 2948 aa12.45□□□□□ -0.42
GNPTAB-201ENST00000299314 ATMQ13315 3056 aa12.44□□□□□ -0.42
GNPTAB-201ENST00000299314 ASH1LQ9NR48 2969 aaKnown RBP12.44□□□□□ -0.42
GNPTAB-201ENST00000299314 TPRXLQ17RH7 258 aa12.44□□□□□ -0.42
GNPTAB-201ENST00000299314 DMXL2Q8TDJ6 3036 aa12.39□□□□□ -0.43
GNPTAB-201ENST00000299314 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
GNPTAB-201ENST00000299314 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
GNPTAB-201ENST00000299314 VCANP13611 3396 aa12.31□□□□□ -0.44
GNPTAB-201ENST00000299314 KRTAP13-3Q3SY46 172 aa12.3□□□□□ -0.44
GNPTAB-201ENST00000299314 ADGRG4Q8IZF6 3080 aa12.3□□□□□ -0.44
GNPTAB-201ENST00000299314 COL12A1Q99715 3063 aa12.29□□□□□ -0.44
GNPTAB-201ENST00000299314 COL6A3P12111 3177 aa12.28□□□□□ -0.44
GNPTAB-201ENST00000299314 FLNCQ14315 2725 aa12.27□□□□□ -0.45
GNPTAB-201ENST00000299314 LAMA1P25391 3075 aa12.26□□□□□ -0.45
GNPTAB-201ENST00000299314 KRTAP10-10P60014 251 aa12.26□□□□□ -0.45
GNPTAB-201ENST00000299314 BOD1L1Q8NFC6 3051 aa12.18□□□□□ -0.46
GNPTAB-201ENST00000299314 SZT2Q5T011 3432 aa12.17□□□□□ -0.46
GNPTAB-201ENST00000299314 NIPBLQ6KC79 2804 aaeCLIP12.16□□□□□ -0.46
GNPTAB-201ENST00000299314 PRO2289Q9P1D8 64 aa12.15□□□□□ -0.46
GNPTAB-201ENST00000299314 CRYBG3Q68DQ2 2970 aa12.11□□□□□ -0.47
GNPTAB-201ENST00000299314 KRTAP12-2P59991 146 aa12.09□□□□□ -0.47
GNPTAB-201ENST00000299314 FRYLO94915 3013 aa12.08□□□□□ -0.48
GNPTAB-201ENST00000299314 CELSR2Q9HCU4 2923 aa12.08□□□□□ -0.48
GNPTAB-201ENST00000299314 CFAP47Q6ZTR5 3102 aa12.07□□□□□ -0.48
GNPTAB-201ENST00000299314 ZZEF1O43149 2961 aa12.05□□□□□ -0.48
GNPTAB-201ENST00000299314 TENM4Q6N022 2769 aa12.02□□□□□ -0.49
GNPTAB-201ENST00000299314 REV3LO60673 3130 aa12.01□□□□□ -0.49
GNPTAB-201ENST00000299314 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
GNPTAB-201ENST00000299314 DCHS2Q6V1P9 2916 aa11.95□□□□□ -0.5
GNPTAB-201ENST00000299314 KRTAP13-4Q3LI77 160 aa11.85□□□□□ -0.51
GNPTAB-201ENST00000299314 HRNRQ86YZ3 2850 aaPredicted RBP11.82□□□□□ -0.52
GNPTAB-201ENST00000299314 KRTAP12-1P59990 96 aa11.81□□□□□ -0.52
GNPTAB-201ENST00000299314 TGP01266 2768 aa11.78□□□□□ -0.52
GNPTAB-201ENST00000299314 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
GNPTAB-201ENST00000299314 TNRC18O15417 2968 aaPredicted RBP11.74□□□□□ -0.53
GNPTAB-201ENST00000299314 USP34Q70CQ2 3546 aa11.73□□□□□ -0.53
GNPTAB-201ENST00000299314 SPTBN5Q9NRC6 3674 aaKnown RBP11.71□□□□□ -0.54
GNPTAB-201ENST00000299314 KRTAP3-1Q9BYR8 98 aa11.69□□□□□ -0.54
GNPTAB-201ENST00000299314 SPEGQ15772 3267 aa11.65□□□□□ -0.54
GNPTAB-201ENST00000299314 FBN2P35556 2912 aa11.6□□□□□ -0.55
GNPTAB-201ENST00000299314 NF1P21359 2839 aa11.57□□□□□ -0.56
GNPTAB-201ENST00000299314 TENM1Q9UKZ4 2725 aa11.56□□□□□ -0.56
GNPTAB-201ENST00000299314 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
GNPTAB-201ENST00000299314 TENM3Q9P273 2699 aa11.49□□□□□ -0.57
GNPTAB-201ENST00000299314 CELSR1Q9NYQ6 3014 aa11.46□□□□□ -0.57
GNPTAB-201ENST00000299314 DMXL1Q9Y485 3027 aa11.4□□□□□ -0.59
GNPTAB-201ENST00000299314 KRTAP10-6P60371 365 aaPredicted RBP11.39□□□□□ -0.59
GNPTAB-201ENST00000299314 KRTAP15-1Q3LI76 137 aa11.37□□□□□ -0.59
GNPTAB-201ENST00000299314 LOC400499M0QZD8 3231 aa11.29□□□□□ -0.6
GNPTAB-201ENST00000299314 MXRA5Q9NR99 2828 aa11.15□□□□□ -0.62
GNPTAB-201ENST00000299314 WDFY3Q8IZQ1 3526 aa11.13□□□□□ -0.63
GNPTAB-201ENST00000299314 MYO15AQ9UKN7 3530 aa11.05□□□□□ -0.64
GNPTAB-201ENST00000299314 PDZD2O15018 2839 aa10.99□□□□□ -0.65
GNPTAB-201ENST00000299314 PKD1L1Q8TDX9 2849 aa10.97□□□□□ -0.65
GNPTAB-201ENST00000299314 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.66
GNPTAB-201ENST00000299314 RELNP78509 3460 aa10.94□□□□□ -0.66
GNPTAB-201ENST00000299314 INE1O15225 51 aa10.94□□□□□ -0.66
GNPTAB-201ENST00000299314 VWFP04275 2813 aa10.92□□□□□ -0.66
GNPTAB-201ENST00000299314 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
GNPTAB-201ENST00000299314 ASPMQ8IZT6 3477 aa10.86□□□□□ -0.67
GNPTAB-201ENST00000299314 DCHS1Q96JQ0 3298 aa10.83□□□□□ -0.68
GNPTAB-201ENST00000299314 ZFHX4Q86UP3 3567 aa10.78□□□□□ -0.68
GNPTAB-201ENST00000299314 MT1HL1P0DM35 61 aa10.77□□□□□ -0.69
GNPTAB-201ENST00000299314 KRTAP10-12P60413 245 aa10.76□□□□□ -0.69
GNPTAB-201ENST00000299314 CSMD1Q96PZ7 3565 aa10.75□□□□□ -0.69
GNPTAB-201ENST00000299314 ANK3Q12955 4377 aaKnown RBP10.71□□□□□ -0.69
GNPTAB-201ENST00000299314 NBPF19A0A087WUL8 3843 aa10.71□□□□□ -0.69
GNPTAB-201ENST00000299314 CRCT1Q9UGL9 99 aa10.61□□□□□ -0.71
GNPTAB-201ENST00000299314 FBN3Q75N90 2809 aa10.56□□□□□ -0.72
GNPTAB-201ENST00000299314 MEGF8Q7Z7M0 2845 aa10.52□□□□□ -0.72
GNPTAB-201ENST00000299314 KRTAP12-3P60328 96 aa10.5□□□□□ -0.73
GNPTAB-201ENST00000299314 FBN1P35555 2871 aaKnown RBP10.47□□□□□ -0.73
GNPTAB-201ENST00000299314 LAMA5O15230 3695 aa10.46□□□□□ -0.73
GNPTAB-201ENST00000299314 KRTAP10-4P60372 401 aaPredicted RBP10.46□□□□□ -0.73
GNPTAB-201ENST00000299314 KRTAP23-1A1A580 65 aa10.45□□□□□ -0.74
GNPTAB-201ENST00000299314 SMG1Q96Q15 3661 aaKnown RBP10.44□□□□□ -0.74
GNPTAB-201ENST00000299314 LCE3AQ5TA76 89 aa10.42□□□□□ -0.74
GNPTAB-201ENST00000299314 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
GNPTAB-201ENST00000299314 HUWE1Q7Z6Z7 4374 aaKnown RBP10.3□□□□□ -0.76
GNPTAB-201ENST00000299314 KRTAP4-5Q9BYR2 181 aa10.28□□□□□ -0.76
GNPTAB-201ENST00000299314 LORP23490 312 aaPredicted RBP10.27□□□□□ -0.76
GNPTAB-201ENST00000299314 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
GNPTAB-201ENST00000299314 SVEP1Q4LDE5 3571 aa10.2□□□□□ -0.78
GNPTAB-201ENST00000299314 ZFHX3Q15911 3703 aa10.19□□□□□ -0.78
GNPTAB-201ENST00000299314 COL7A1Q02388 2944 aa10.14□□□□□ -0.79
GNPTAB-201ENST00000299314 TRRAPQ9Y4A5 3859 aa10.13□□□□□ -0.79
GNPTAB-201ENST00000299314 ALMS1Q8TCU4 4167 aa10.1□□□□□ -0.79
GNPTAB-201ENST00000299314 DMDP11532 3685 aa10.06□□□□□ -0.8
GNPTAB-201ENST00000299314 CSMD2Q7Z408 3487 aa9.99□□□□□ -0.81
GNPTAB-201ENST00000299314 SPENQ96T58 3664 aaKnown RBP9.93□□□□□ -0.82
GNPTAB-201ENST00000299314 KRTAP10-5P60370 271 aa9.92□□□□□ -0.82
GNPTAB-201ENST00000299314 CUBNO60494 3623 aa9.9□□□□□ -0.83
GNPTAB-201ENST00000299314 MUC3AQ02505 3323 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms