RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 PRR15Q8IV56 129 aa11.71□□□□□ -0.54
PACSIN3-201ENST00000298838 A0A087WVE0 104 aa11.7□□□□□ -0.54
PACSIN3-201ENST00000298838 J3QL48 77 aa11.68□□□□□ -0.54
PACSIN3-201ENST00000298838 A0A1B0GVX0 72 aa11.67□□□□□ -0.54
PACSIN3-201ENST00000298838 RETNLBQ9BQ08 111 aa11.67□□□□□ -0.54
PACSIN3-201ENST00000298838 IGHV6-1A0A0B4J1U7 121 aa11.65□□□□□ -0.54
PACSIN3-201ENST00000298838 HCG22E2RYF7 251 aa11.6□□□□□ -0.55
PACSIN3-201ENST00000298838 C8orf17Q9NRJ1 99 aa11.58□□□□□ -0.56
PACSIN3-201ENST00000298838 FAM236AA0A1B0GUQ0 79 aa11.58□□□□□ -0.56
PACSIN3-201ENST00000298838 FAM236BA0A1B0GV22 79 aa11.58□□□□□ -0.56
PACSIN3-201ENST00000298838 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
PACSIN3-201ENST00000298838 C8orf87E5RJ46 101 aa11.57□□□□□ -0.56
PACSIN3-201ENST00000298838 MMP24-AS1A0A0U1RRL7 71 aa11.56□□□□□ -0.56
PACSIN3-201ENST00000298838 WFDC13Q8IUB5 93 aa11.55□□□□□ -0.56
PACSIN3-201ENST00000298838 NOTCH2NLQ7Z3S9 236 aa11.54□□□□□ -0.56
PACSIN3-201ENST00000298838 LINC00313P59037 77 aa11.53□□□□□ -0.56
PACSIN3-201ENST00000298838 CASC2Q6XLA1 102 aa11.53□□□□□ -0.56
PACSIN3-201ENST00000298838 hDV103S1A0JD37 113 aa11.52□□□□□ -0.57
PACSIN3-201ENST00000298838 SCGB1A1P11684 91 aa11.52□□□□□ -0.57
PACSIN3-201ENST00000298838 PCLOQ9Y6V0 5065 aa11.49□□□□□ -0.57
PACSIN3-201ENST00000298838 IGLV7-46A0A075B6I9 117 aa11.49□□□□□ -0.57
PACSIN3-201ENST00000298838 PRR4Q16378 134 aa11.46□□□□□ -0.57
PACSIN3-201ENST00000298838 TMEM254Q8TBM7 123 aa11.46□□□□□ -0.58
PACSIN3-201ENST00000298838 MRPL34Q9BQ48 92 aaKnown RBP11.44□□□□□ -0.58
PACSIN3-201ENST00000298838 C9orf92A6NGG3 77 aa11.44□□□□□ -0.58
PACSIN3-201ENST00000298838 ATOX1O00244 68 aa11.43□□□□□ -0.58
PACSIN3-201ENST00000298838 KRTAP16-1A8MUX0 517 aa11.41□□□□□ -0.58
PACSIN3-201ENST00000298838 KRTAP13-3Q3SY46 172 aa11.37□□□□□ -0.59
PACSIN3-201ENST00000298838 NDUFS5O43920 106 aa11.36□□□□□ -0.59
PACSIN3-201ENST00000298838 SMIM20Q8N5G0 67 aa11.35□□□□□ -0.59
PACSIN3-201ENST00000298838 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
PACSIN3-201ENST00000298838 OCR1Q9BZK8 76 aa11.34□□□□□ -0.59
PACSIN3-201ENST00000298838 TPRXLQ17RH7 258 aa11.32□□□□□ -0.6
PACSIN3-201ENST00000298838 ANAPC13Q9BS18 74 aa11.32□□□□□ -0.6
PACSIN3-201ENST00000298838 TP53AIP1Q9HCN2 124 aa11.3□□□□□ -0.6
PACSIN3-201ENST00000298838 TRAV7A0A075B6U4 112 aa11.28□□□□□ -0.6
PACSIN3-201ENST00000298838 C20orf166-AS1Q96NR2 134 aa11.28□□□□□ -0.6
PACSIN3-201ENST00000298838 SERP2Q8N6R1 65 aa11.27□□□□□ -0.61
PACSIN3-201ENST00000298838 UQCRQO14949 82 aa11.25□□□□□ -0.61
PACSIN3-201ENST00000298838 A8MUU9 505 aa11.25□□□□□ -0.61
PACSIN3-201ENST00000298838 XP32Q5T750 250 aa11.24□□□□□ -0.61
PACSIN3-201ENST00000298838 Q75L30 129 aa11.21□□□□□ -0.61
PACSIN3-201ENST00000298838 HERC1Q15751 4861 aa11.19□□□□□ -0.62
PACSIN3-201ENST00000298838 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
PACSIN3-201ENST00000298838 COX7CP15954 63 aa11.18□□□□□ -0.62
PACSIN3-201ENST00000298838 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
PACSIN3-201ENST00000298838 RPL37P61927 97 aaKnown RBP11.15□□□□□ -0.62
PACSIN3-201ENST00000298838 Q5W150 140 aa11.14□□□□□ -0.63
PACSIN3-201ENST00000298838 H0Y9P7 68 aa11.14□□□□□ -0.63
PACSIN3-201ENST00000298838 ZCCHC13Q8WW36 166 aaKnown RBP11.14□□□□□ -0.63
PACSIN3-201ENST00000298838 MP68P56378 58 aa11.13□□□□□ -0.63
PACSIN3-201ENST00000298838 LPAP08519 4548 aa11.12□□□□□ -0.63
PACSIN3-201ENST00000298838 ATP11AUNQ6ZP68 121 aa11.09□□□□□ -0.63
PACSIN3-201ENST00000298838 C20orf197Q8N268 126 aa11.07□□□□□ -0.64
PACSIN3-201ENST00000298838 H3BPC8 53 aa11.05□□□□□ -0.64
PACSIN3-201ENST00000298838 LINC00208Q96KT6 92 aa11.05□□□□□ -0.64
PACSIN3-201ENST00000298838 CCDC179H3BU77 68 aa11.04□□□□□ -0.64
PACSIN3-201ENST00000298838 LRP2P98164 4655 aa11.03□□□□□ -0.64
PACSIN3-201ENST00000298838 C1orf64Q8NEQ6 169 aa11.02□□□□□ -0.64
PACSIN3-201ENST00000298838 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
PACSIN3-201ENST00000298838 SNURFQ9Y675 71 aa11.01□□□□□ -0.65
PACSIN3-201ENST00000298838 HMCN2Q8NDA2 5059 aa11.01□□□□□ -0.65
PACSIN3-201ENST00000298838 KLKP1Q107X0 134 aa11□□□□□ -0.65
PACSIN3-201ENST00000298838 LOC101927531A0A1B0GV80 90 aa10.99□□□□□ -0.65
PACSIN3-201ENST00000298838 PCOTHQ58A44 107 aa10.96□□□□□ -0.65
PACSIN3-201ENST00000298838 IGKV2-30P06310 120 aa10.95□□□□□ -0.66
PACSIN3-201ENST00000298838 IGKV2D-30A0A075B6S6 120 aa10.95□□□□□ -0.66
PACSIN3-201ENST00000298838 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
PACSIN3-201ENST00000298838 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
PACSIN3-201ENST00000298838 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
PACSIN3-201ENST00000298838 CYSTM1Q9H1C7 97 aa10.88□□□□□ -0.67
PACSIN3-201ENST00000298838 SPINK7P58062 85 aa10.87□□□□□ -0.67
PACSIN3-201ENST00000298838 NDUFC1O43677 76 aa10.86□□□□□ -0.67
PACSIN3-201ENST00000298838 H7BZZ5 65 aa10.81□□□□□ -0.68
PACSIN3-201ENST00000298838 HRES1P13985 223 aa10.73□□□□□ -0.69
PACSIN3-201ENST00000298838 MUC17Q685J3 4493 aa10.71□□□□□ -0.7
PACSIN3-201ENST00000298838 SPANXA2-OT1Q8N9U9 137 aa10.69□□□□□ -0.7
PACSIN3-201ENST00000298838 TMEM258P61165 79 aa10.68□□□□□ -0.7
PACSIN3-201ENST00000298838 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
PACSIN3-201ENST00000298838 SVIPQ8NHG7 77 aa10.65□□□□□ -0.71
PACSIN3-201ENST00000298838 KRTAP4-1Q9BYQ7 146 aa10.65□□□□□ -0.71
PACSIN3-201ENST00000298838 FAM236DA0A1B0GTK5 79 aa10.61□□□□□ -0.71
PACSIN3-201ENST00000298838 FAM236CP0DP71 79 aa10.61□□□□□ -0.71
PACSIN3-201ENST00000298838 ATP5EP56381 51 aaPredicted RBP10.58□□□□□ -0.72
PACSIN3-201ENST00000298838 COX6B2Q6YFQ2 88 aa10.56□□□□□ -0.72
PACSIN3-201ENST00000298838 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
PACSIN3-201ENST00000298838 RBM12B-AS1Q9P1G2 102 aa10.55□□□□□ -0.72
PACSIN3-201ENST00000298838 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
PACSIN3-201ENST00000298838 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.73
PACSIN3-201ENST00000298838 A8MUN3 132 aa10.51□□□□□ -0.73
PACSIN3-201ENST00000298838 KRTAP3-1Q9BYR8 98 aa10.49□□□□□ -0.73
PACSIN3-201ENST00000298838 MUC2Q02817 5179 aa10.47□□□□□ -0.73
PACSIN3-201ENST00000298838 ACYP2P14621 99 aa10.46□□□□□ -0.74
PACSIN3-201ENST00000298838 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
PACSIN3-201ENST00000298838 COA5Q86WW8 74 aa10.35□□□□□ -0.75
PACSIN3-201ENST00000298838 RNF213Q63HN8 5207 aa10.34□□□□□ -0.75
PACSIN3-201ENST00000298838 KRTAP19-2Q3LHN2 52 aa10.33□□□□□ -0.76
PACSIN3-201ENST00000298838 SERP1Q9Y6X1 66 aa10.33□□□□□ -0.76
PACSIN3-201ENST00000298838 CHKB-CPT1BH3BT56 60 aa10.3□□□□□ -0.76
PACSIN3-201ENST00000298838 S4R3F8 94 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms