RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 NDUFB1O75438 58 aa13.84□□□□□ -0.19
GTF2A1-201ENST00000298173 A0A087WVE0 104 aa13.82□□□□□ -0.2
GTF2A1-201ENST00000298173 A0A1B0GVX0 72 aa13.81□□□□□ -0.2
GTF2A1-201ENST00000298173 RETNLBQ9BQ08 111 aa13.8□□□□□ -0.2
GTF2A1-201ENST00000298173 J3QL48 77 aa13.76□□□□□ -0.21
GTF2A1-201ENST00000298173 IGHV6-1A0A0B4J1U7 121 aa13.75□□□□□ -0.21
GTF2A1-201ENST00000298173 NOTCH2NLQ7Z3S9 236 aa13.72□□□□□ -0.21
GTF2A1-201ENST00000298173 C8orf17Q9NRJ1 99 aa13.71□□□□□ -0.21
GTF2A1-201ENST00000298173 PCLOQ9Y6V0 5065 aa13.7□□□□□ -0.22
GTF2A1-201ENST00000298173 MMP24-AS1A0A0U1RRL7 71 aa13.7□□□□□ -0.22
GTF2A1-201ENST00000298173 HCG22E2RYF7 251 aa13.69□□□□□ -0.22
GTF2A1-201ENST00000298173 FP248Q71RG6 208 aaPredicted RBP13.69□□□□□ -0.22
GTF2A1-201ENST00000298173 C8orf87E5RJ46 101 aa13.66□□□□□ -0.22
GTF2A1-201ENST00000298173 FAM236AA0A1B0GUQ0 79 aa13.65□□□□□ -0.22
GTF2A1-201ENST00000298173 FAM236BA0A1B0GV22 79 aa13.65□□□□□ -0.22
GTF2A1-201ENST00000298173 LINC00313P59037 77 aa13.65□□□□□ -0.22
GTF2A1-201ENST00000298173 WFDC13Q8IUB5 93 aa13.63□□□□□ -0.23
GTF2A1-201ENST00000298173 SCGB1A1P11684 91 aa13.62□□□□□ -0.23
GTF2A1-201ENST00000298173 CASC2Q6XLA1 102 aa13.62□□□□□ -0.23
GTF2A1-201ENST00000298173 hDV103S1A0JD37 113 aa13.61□□□□□ -0.23
GTF2A1-201ENST00000298173 IGLV7-46A0A075B6I9 117 aa13.57□□□□□ -0.24
GTF2A1-201ENST00000298173 KRTAP16-1A8MUX0 517 aa13.56□□□□□ -0.24
GTF2A1-201ENST00000298173 TMEM254Q8TBM7 123 aa13.56□□□□□ -0.24
GTF2A1-201ENST00000298173 MRPL34Q9BQ48 92 aaKnown RBP13.53□□□□□ -0.24
GTF2A1-201ENST00000298173 PRR4Q16378 134 aa13.52□□□□□ -0.25
GTF2A1-201ENST00000298173 C9orf92A6NGG3 77 aa13.5□□□□□ -0.25
GTF2A1-201ENST00000298173 KRTAP13-3Q3SY46 172 aa13.49□□□□□ -0.25
GTF2A1-201ENST00000298173 ATOX1O00244 68 aa13.47□□□□□ -0.25
GTF2A1-201ENST00000298173 Q8N9P0 234 aaPredicted RBP13.47□□□□□ -0.25
GTF2A1-201ENST00000298173 OCR1Q9BZK8 76 aa13.44□□□□□ -0.26
GTF2A1-201ENST00000298173 TPRXLQ17RH7 258 aa13.4□□□□□ -0.26
GTF2A1-201ENST00000298173 SMIM20Q8N5G0 67 aa13.38□□□□□ -0.27
GTF2A1-201ENST00000298173 C20orf166-AS1Q96NR2 134 aa13.38□□□□□ -0.27
GTF2A1-201ENST00000298173 A8MUU9 505 aa13.36□□□□□ -0.27
GTF2A1-201ENST00000298173 NDUFS5O43920 106 aa13.36□□□□□ -0.27
GTF2A1-201ENST00000298173 TRAV7A0A075B6U4 112 aa13.34□□□□□ -0.27
GTF2A1-201ENST00000298173 TP53AIP1Q9HCN2 124 aa13.34□□□□□ -0.27
GTF2A1-201ENST00000298173 HERC1Q15751 4861 aa13.33□□□□□ -0.28
GTF2A1-201ENST00000298173 XP32Q5T750 250 aa13.32□□□□□ -0.28
GTF2A1-201ENST00000298173 SERP2Q8N6R1 65 aa13.31□□□□□ -0.28
GTF2A1-201ENST00000298173 ANAPC13Q9BS18 74 aa13.31□□□□□ -0.28
GTF2A1-201ENST00000298173 UQCRQO14949 82 aa13.3□□□□□ -0.28
GTF2A1-201ENST00000298173 LPAP08519 4548 aa13.3□□□□□ -0.28
GTF2A1-201ENST00000298173 Q75L30 129 aa13.29□□□□□ -0.28
GTF2A1-201ENST00000298173 Q5W150 140 aa13.24□□□□□ -0.29
GTF2A1-201ENST00000298173 COX7CP15954 63 aa13.22□□□□□ -0.29
GTF2A1-201ENST00000298173 C5orf47Q569G3 176 aa13.21□□□□□ -0.29
GTF2A1-201ENST00000298173 RPL37P61927 97 aaKnown RBP13.21□□□□□ -0.3
GTF2A1-201ENST00000298173 LRP2P98164 4655 aa13.18□□□□□ -0.3
GTF2A1-201ENST00000298173 TRAV22A0A0B4J277 110 aa13.18□□□□□ -0.3
GTF2A1-201ENST00000298173 ZCCHC13Q8WW36 166 aaKnown RBP13.17□□□□□ -0.3
GTF2A1-201ENST00000298173 HMCN2Q8NDA2 5059 aa13.15□□□□□ -0.31
GTF2A1-201ENST00000298173 H0Y9P7 68 aa13.14□□□□□ -0.31
GTF2A1-201ENST00000298173 PCP4P48539 62 aa13.12□□□□□ -0.31
GTF2A1-201ENST00000298173 MP68P56378 58 aa13.1□□□□□ -0.31
GTF2A1-201ENST00000298173 ATP11AUNQ6ZP68 121 aa13.08□□□□□ -0.32
GTF2A1-201ENST00000298173 A0A0U1RQV1 116 aa13.06□□□□□ -0.32
GTF2A1-201ENST00000298173 H3BPC8 53 aa13.06□□□□□ -0.32
GTF2A1-201ENST00000298173 CCDC179H3BU77 68 aa13.06□□□□□ -0.32
GTF2A1-201ENST00000298173 C20orf197Q8N268 126 aa13.06□□□□□ -0.32
GTF2A1-201ENST00000298173 LINC00208Q96KT6 92 aa13.05□□□□□ -0.32
GTF2A1-201ENST00000298173 C1orf64Q8NEQ6 169 aa13.02□□□□□ -0.32
GTF2A1-201ENST00000298173 KLKP1Q107X0 134 aa13.01□□□□□ -0.33
GTF2A1-201ENST00000298173 SNURFQ9Y675 71 aa12.99□□□□□ -0.33
GTF2A1-201ENST00000298173 LOC101927531A0A1B0GV80 90 aa12.97□□□□□ -0.33
GTF2A1-201ENST00000298173 IGKV2-30P06310 120 aa12.97□□□□□ -0.33
GTF2A1-201ENST00000298173 PCOTHQ58A44 107 aa12.97□□□□□ -0.33
GTF2A1-201ENST00000298173 CYP4F30PQ9H0H9 118 aa12.94□□□□□ -0.34
GTF2A1-201ENST00000298173 CYSTM1Q9H1C7 97 aa12.93□□□□□ -0.34
GTF2A1-201ENST00000298173 SEC61BP60468 96 aaKnown RBP12.92□□□□□ -0.34
GTF2A1-201ENST00000298173 MUC17Q685J3 4493 aa12.9□□□□□ -0.34
GTF2A1-201ENST00000298173 IGKV2D-30A0A075B6S6 120 aa12.89□□□□□ -0.35
GTF2A1-201ENST00000298173 SPINK7P58062 85 aa12.87□□□□□ -0.35
GTF2A1-201ENST00000298173 C7orf65Q6ZTY9 151 aa12.86□□□□□ -0.35
GTF2A1-201ENST00000298173 H7BZZ5 65 aa12.8□□□□□ -0.36
GTF2A1-201ENST00000298173 NDUFC1O43677 76 aa12.8□□□□□ -0.36
GTF2A1-201ENST00000298173 KRTAP4-1Q9BYQ7 146 aa12.72□□□□□ -0.37
GTF2A1-201ENST00000298173 HRES1P13985 223 aa12.7□□□□□ -0.38
GTF2A1-201ENST00000298173 SPANXA2-OT1Q8N9U9 137 aa12.64□□□□□ -0.39
GTF2A1-201ENST00000298173 C4orf26Q17RF5 130 aa12.61□□□□□ -0.39
GTF2A1-201ENST00000298173 MPLKIPQ8TAP9 179 aa12.58□□□□□ -0.4
GTF2A1-201ENST00000298173 TMEM258P61165 79 aa12.57□□□□□ -0.4
GTF2A1-201ENST00000298173 UBR4Q5T4S7 5183 aa12.56□□□□□ -0.4
GTF2A1-201ENST00000298173 MUC2Q02817 5179 aa12.52□□□□□ -0.41
GTF2A1-201ENST00000298173 KRTAP3-1Q9BYR8 98 aa12.51□□□□□ -0.41
GTF2A1-201ENST00000298173 COX6B2Q6YFQ2 88 aa12.51□□□□□ -0.41
GTF2A1-201ENST00000298173 FAM236DA0A1B0GTK5 79 aa12.48□□□□□ -0.41
GTF2A1-201ENST00000298173 FAM236CP0DP71 79 aa12.48□□□□□ -0.41
GTF2A1-201ENST00000298173 DMAC1Q96GE9 116 aa12.47□□□□□ -0.41
GTF2A1-201ENST00000298173 ATP5EP56381 51 aaPredicted RBP12.45□□□□□ -0.42
GTF2A1-201ENST00000298173 RBM12B-AS1Q9P1G2 102 aa12.42□□□□□ -0.42
GTF2A1-201ENST00000298173 RNF213Q63HN8 5207 aa12.42□□□□□ -0.42
GTF2A1-201ENST00000298173 A8MUN3 132 aa12.41□□□□□ -0.42
GTF2A1-201ENST00000298173 KRTAP19-2Q3LHN2 52 aa12.38□□□□□ -0.43
GTF2A1-201ENST00000298173 ACYP2P14621 99 aa12.35□□□□□ -0.43
GTF2A1-201ENST00000298173 H1FX-AS1Q4G0G2 97 aa12.27□□□□□ -0.45
GTF2A1-201ENST00000298173 COA5Q86WW8 74 aa12.22□□□□□ -0.45
GTF2A1-201ENST00000298173 SERP1Q9Y6X1 66 aa12.19□□□□□ -0.46
GTF2A1-201ENST00000298173 LCE2CQ5TA81 110 aa12.17□□□□□ -0.46
GTF2A1-201ENST00000298173 RPS28P62857 69 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms