RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 CFAP47Q6ZTR5 3102 aa5.49□□□□□ -1.53
KPNB1-201ENST00000290158 BOD1L1Q8NFC6 3051 aa5.47□□□□□ -1.53
KPNB1-201ENST00000290158 GCN1Q92616 2671 aaKnown RBP5.47□□□□□ -1.53
KPNB1-201ENST00000290158 STAB1Q9NY15 2570 aa5.46□□□□□ -1.53
KPNB1-201ENST00000290158 NBEAL1Q6ZS30 2694 aa5.46□□□□□ -1.53
KPNB1-201ENST00000290158 DMXL2Q8TDJ6 3036 aa5.44□□□□□ -1.54
KPNB1-201ENST00000290158 ATMQ13315 3056 aa5.44□□□□□ -1.54
KPNB1-201ENST00000290158 FRYLO94915 3013 aa5.44□□□□□ -1.54
KPNB1-201ENST00000290158 KMT2BQ9UMN6 2715 aaPredicted RBP5.43□□□□□ -1.54
KPNB1-201ENST00000290158 NBEAL2Q6ZNJ1 2754 aa5.43□□□□□ -1.54
KPNB1-201ENST00000290158 UTP20O75691 2785 aaKnown RBP5.41□□□□□ -1.54
KPNB1-201ENST00000290158 COL12A1Q99715 3063 aa5.41□□□□□ -1.54
KPNB1-201ENST00000290158 KALRNO60229 2985 aa5.4□□□□□ -1.55
KPNB1-201ENST00000290158 MYO15AQ9UKN7 3530 aa5.39□□□□□ -1.55
KPNB1-201ENST00000290158 NOTCH1P46531 2555 aa5.38□□□□□ -1.55
KPNB1-201ENST00000290158 XP32Q5T750 250 aa5.38□□□□□ -1.55
KPNB1-201ENST00000290158 DMXL1Q9Y485 3027 aa5.37□□□□□ -1.55
KPNB1-201ENST00000290158 ASPMQ8IZT6 3477 aa5.37□□□□□ -1.55
KPNB1-201ENST00000290158 MAP1AP78559 2803 aaPredicted RBP5.37□□□□□ -1.55
KPNB1-201ENST00000290158 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
KPNB1-201ENST00000290158 REV3LO60673 3130 aa5.35□□□□□ -1.55
KPNB1-201ENST00000290158 TACC2O95359 2948 aa5.33□□□□□ -1.56
KPNB1-201ENST00000290158 ITPR1Q14643 2758 aa5.33□□□□□ -1.56
KPNB1-201ENST00000290158 KRTAP1-4P0C5Y4 121 aa5.33□□□□□ -1.56
KPNB1-201ENST00000290158 HIVEP1P15822 2718 aa5.32□□□□□ -1.56
KPNB1-201ENST00000290158 UBR5O95071 2799 aaPredicted RBP5.32□□□□□ -1.56
KPNB1-201ENST00000290158 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
KPNB1-201ENST00000290158 ADGRG4Q8IZF6 3080 aa5.3□□□□□ -1.56
KPNB1-201ENST00000290158 NBPF19A0A087WUL8 3843 aa5.29□□□□□ -1.56
KPNB1-201ENST00000290158 STAB2Q8WWQ8 2551 aa5.27□□□□□ -1.57
KPNB1-201ENST00000290158 NBEAQ8NFP9 2946 aa5.27□□□□□ -1.57
KPNB1-201ENST00000290158 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
KPNB1-201ENST00000290158 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
KPNB1-201ENST00000290158 APCP25054 2843 aa5.24□□□□□ -1.57
KPNB1-201ENST00000290158 TENM4Q6N022 2769 aa5.24□□□□□ -1.57
KPNB1-201ENST00000290158 FLNCQ14315 2725 aa5.19□□□□□ -1.58
KPNB1-201ENST00000290158 LOC400499M0QZD8 3231 aa5.19□□□□□ -1.58
KPNB1-201ENST00000290158 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
KPNB1-201ENST00000290158 WDFY3Q8IZQ1 3526 aa5.19□□□□□ -1.58
KPNB1-201ENST00000290158 ZZEF1O43149 2961 aa5.18□□□□□ -1.58
KPNB1-201ENST00000290158 RELNP78509 3460 aa5.15□□□□□ -1.59
KPNB1-201ENST00000290158 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
KPNB1-201ENST00000290158 ASH1LQ9NR48 2969 aaKnown RBP5.12□□□□□ -1.59
KPNB1-201ENST00000290158 HRNRQ86YZ3 2850 aaPredicted RBP5.11□□□□□ -1.59
KPNB1-201ENST00000290158 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
KPNB1-201ENST00000290158 ZFHX4Q86UP3 3567 aa5.09□□□□□ -1.59
KPNB1-201ENST00000290158 DCHS1Q96JQ0 3298 aa5.09□□□□□ -1.6
KPNB1-201ENST00000290158 DMDP11532 3685 aa5.08□□□□□ -1.6
KPNB1-201ENST00000290158 LAMA5O15230 3695 aa5.08□□□□□ -1.6
KPNB1-201ENST00000290158 CELSR2Q9HCU4 2923 aa5.06□□□□□ -1.6
KPNB1-201ENST00000290158 TENM2Q9NT68 2774 aa5.04□□□□□ -1.6
KPNB1-201ENST00000290158 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
KPNB1-201ENST00000290158 DCHS2Q6V1P9 2916 aa5.02□□□□□ -1.61
KPNB1-201ENST00000290158 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
KPNB1-201ENST00000290158 ANK3Q12955 4377 aaKnown RBP5.01□□□□□ -1.61
KPNB1-201ENST00000290158 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
KPNB1-201ENST00000290158 CELSR1Q9NYQ6 3014 aa4.97□□□□□ -1.61
KPNB1-201ENST00000290158 FBN2P35556 2912 aa4.96□□□□□ -1.61
KPNB1-201ENST00000290158 CSMD1Q96PZ7 3565 aa4.96□□□□□ -1.62
KPNB1-201ENST00000290158 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.624e-6■■□□□ 11.5
KPNB1-201ENST00000290158 ZANQ9Y493 2812 aa4.96□□□□□ -1.62
KPNB1-201ENST00000290158 INE1O15225 51 aa4.95□□□□□ -1.62
KPNB1-201ENST00000290158 NF1P21359 2839 aa4.94□□□□□ -1.62
KPNB1-201ENST00000290158 TENM1Q9UKZ4 2725 aa4.89□□□□□ -1.63
KPNB1-201ENST00000290158 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
KPNB1-201ENST00000290158 SMG1Q96Q15 3661 aaKnown RBP4.87□□□□□ -1.63
KPNB1-201ENST00000290158 PDZD2O15018 2839 aa4.87□□□□□ -1.63
KPNB1-201ENST00000290158 ZFHX3Q15911 3703 aa4.87□□□□□ -1.63
KPNB1-201ENST00000290158 TGP01266 2768 aa4.82□□□□□ -1.64
KPNB1-201ENST00000290158 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
KPNB1-201ENST00000290158 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
KPNB1-201ENST00000290158 CSMD2Q7Z408 3487 aa4.8□□□□□ -1.64
KPNB1-201ENST00000290158 BSNQ9UPA5 3926 aa4.8□□□□□ -1.64
KPNB1-201ENST00000290158 SPENQ96T58 3664 aaKnown RBP4.8□□□□□ -1.64
KPNB1-201ENST00000290158 HUWE1Q7Z6Z7 4374 aaKnown RBP4.77□□□□□ -1.65
KPNB1-201ENST00000290158 ALMS1Q8TCU4 4167 aa4.77□□□□□ -1.65
KPNB1-201ENST00000290158 MXRA5Q9NR99 2828 aa4.77□□□□□ -1.65
KPNB1-201ENST00000290158 MUC3AQ02505 3323 aa4.76□□□□□ -1.65
KPNB1-201ENST00000290158 SVEP1Q4LDE5 3571 aa4.75□□□□□ -1.65
KPNB1-201ENST00000290158 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
KPNB1-201ENST00000290158 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
KPNB1-201ENST00000290158 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
KPNB1-201ENST00000290158 PKD1L1Q8TDX9 2849 aa4.71□□□□□ -1.66
KPNB1-201ENST00000290158 OTOGQ6ZRI0 2925 aa4.71□□□□□ -1.66
KPNB1-201ENST00000290158 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
KPNB1-201ENST00000290158 VWFP04275 2813 aa4.68□□□□□ -1.66
KPNB1-201ENST00000290158 TRRAPQ9Y4A5 3859 aa4.66□□□□□ -1.66
KPNB1-201ENST00000290158 KRTAP3-2Q9BYR7 98 aa4.61□□□□□ -1.67
KPNB1-201ENST00000290158 VPS13CQ709C8 3753 aa4.58□□□□□ -1.68
KPNB1-201ENST00000290158 AKAP9Q99996 3911 aa4.58□□□□□ -1.68
KPNB1-201ENST00000290158 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
KPNB1-201ENST00000290158 CUBNO60494 3623 aa4.52□□□□□ -1.69
KPNB1-201ENST00000290158 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
KPNB1-201ENST00000290158 KRTAP10-4P60372 401 aaPredicted RBP4.48□□□□□ -1.69
KPNB1-201ENST00000290158 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
KPNB1-201ENST00000290158 DNAH9Q9NYC9 4486 aa4.45□□□□□ -1.7
KPNB1-201ENST00000290158 ZNF469Q96JG9 3925 aaPredicted RBP4.39□□□□□ -1.71
KPNB1-201ENST00000290158 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
KPNB1-201ENST00000290158 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
KPNB1-201ENST00000290158 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms