RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 BRD3OSQ6XYD6 125 aa1.72□□□□□ -2.13
SREK1-201ENST00000284041 NBEAL2Q6ZNJ1 2754 aa1.72□□□□□ -2.13
SREK1-201ENST00000284041 J3QKU1 62 aa1.72□□□□□ -2.13
SREK1-201ENST00000284041 STATHP02808 62 aa1.72□□□□□ -2.13
SREK1-201ENST00000284041 DNAH17Q9UFH2 4485 aa1.71□□□□□ -2.13
SREK1-201ENST00000284041 WFDC10BQ8IUB3 73 aa1.71□□□□□ -2.14
SREK1-201ENST00000284041 USMG5Q96IX5 58 aa1.71□□□□□ -2.14
SREK1-201ENST00000284041 DEFB130BP0DP73 79 aa1.71□□□□□ -2.14
SREK1-201ENST00000284041 DEFB130AP0DP74 79 aa1.71□□□□□ -2.14
SREK1-201ENST00000284041 TNCP24821 2201 aa1.71□□□□□ -2.14
SREK1-201ENST00000284041 MACF1Q9UPN3 7388 aaKnown RBP1.7□□□□□ -2.14
SREK1-201ENST00000284041 PRB3Q04118 309 aaPredicted RBP1.7□□□□□ -2.14
SREK1-201ENST00000284041 CRCT1Q9UGL9 99 aa1.7□□□□□ -2.14
SREK1-201ENST00000284041 LYSTQ99698 3801 aa1.7□□□□□ -2.14
SREK1-201ENST00000284041 DNAH9Q9NYC9 4486 aa1.69□□□□□ -2.14
SREK1-201ENST00000284041 LELP1Q5T871 98 aa1.69□□□□□ -2.14
SREK1-201ENST00000284041 Q5VSD8 79 aa1.69□□□□□ -2.14
SREK1-201ENST00000284041 C10orf95Q9H7T3 257 aa1.69□□□□□ -2.14
SREK1-201ENST00000284041 GOLGA4Q13439 2230 aaKnown RBP1.69□□□□□ -2.14
SREK1-201ENST00000284041 TEX15Q9BXT5 2789 aa1.68□□□□□ -2.14
SREK1-201ENST00000284041 SORL1Q92673 2214 aa1.67□□□□□ -2.14
SREK1-201ENST00000284041 CRIPTQ9P021 101 aa1.67□□□□□ -2.14
SREK1-201ENST00000284041 CFAP46Q8IYW2 2715 aa1.67□□□□□ -2.14
SREK1-201ENST00000284041 VWFP04275 2813 aa1.67□□□□□ -2.14
SREK1-201ENST00000284041 CEP350Q5VT06 3117 aa1.66□□□□□ -2.14
SREK1-201ENST00000284041 SPAG17Q6Q759 2223 aa1.66□□□□□ -2.14
SREK1-201ENST00000284041 KRTAP12-1P59990 96 aa1.65□□□□□ -2.14
SREK1-201ENST00000284041 Q9Y3F1 56 aa1.64□□□□□ -2.15
SREK1-201ENST00000284041 TENM3Q9P273 2699 aa1.64□□□□□ -2.15
SREK1-201ENST00000284041 H3BUX3 64 aa1.64□□□□□ -2.15
SREK1-201ENST00000284041 WNK2Q9Y3S1 2297 aa1.64□□□□□ -2.15
SREK1-201ENST00000284041 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
SREK1-201ENST00000284041 KNL1Q8NG31 2342 aa1.63□□□□□ -2.15
SREK1-201ENST00000284041 TNRC18O15417 2968 aaPredicted RBP1.63□□□□□ -2.15
SREK1-201ENST00000284041 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
SREK1-201ENST00000284041 S4R3F8 94 aa1.63□□□□□ -2.15
SREK1-201ENST00000284041 PIEZO2Q9H5I5 2752 aa1.63□□□□□ -2.15
SREK1-201ENST00000284041 NBEAQ8NFP9 2946 aa1.62□□□□□ -2.15
SREK1-201ENST00000284041 SPENQ96T58 3664 aaKnown RBP1.62□□□□□ -2.15
SREK1-201ENST00000284041 DEFB104AQ8WTQ1 72 aa1.62□□□□□ -2.15
SREK1-201ENST00000284041 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
SREK1-201ENST00000284041 DOPEY2Q9Y3R5 2298 aa1.62□□□□□ -2.15
SREK1-201ENST00000284041 KIAA0100Q14667 2235 aaKnown RBP1.61□□□□□ -2.15
SREK1-201ENST00000284041 ABCA1O95477 2261 aa1.61□□□□□ -2.15
SREK1-201ENST00000284041 TOMM7Q9P0U1 55 aa1.6□□□□□ -2.15
SREK1-201ENST00000284041 STAB2Q8WWQ8 2551 aa1.59□□□□□ -2.16
SREK1-201ENST00000284041 UBE2DNLQ8IWF7 75 aa1.58□□□□□ -2.16
SREK1-201ENST00000284041 URB1O60287 2271 aaKnown RBP1.58□□□□□ -2.16
SREK1-201ENST00000284041 MEGF8Q7Z7M0 2845 aa1.58□□□□□ -2.16
SREK1-201ENST00000284041 KALRNO60229 2985 aa1.58□□□□□ -2.16
SREK1-201ENST00000284041 MED13LQ71F56 2210 aa1.58□□□□□ -2.16
SREK1-201ENST00000284041 DEFB1P60022 68 aa1.57□□□□□ -2.16
SREK1-201ENST00000284041 SMG1Q96Q15 3661 aaKnown RBP1.57□□□□□ -2.16
SREK1-201ENST00000284041 RHPN1-AS1Q9BWJ2 59 aa1.57□□□□□ -2.16
SREK1-201ENST00000284041 SYNE2Q8WXH0 6885 aaKnown RBP1.56□□□□□ -2.16
SREK1-201ENST00000284041 AKAP6Q13023 2319 aa1.56□□□□□ -2.16
SREK1-201ENST00000284041 BOD1L1Q8NFC6 3051 aa1.56□□□□□ -2.16
SREK1-201ENST00000284041 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
SREK1-201ENST00000284041 DEFB110Q30KQ9 67 aa1.55□□□□□ -2.16
SREK1-201ENST00000284041 SZT2Q5T011 3432 aa1.54□□□□□ -2.16
SREK1-201ENST00000284041 TNXBP22105 4242 aa1.53□□□□□ -2.16
SREK1-201ENST00000284041 APELAP0DMC3 54 aa1.53□□□□□ -2.16
SREK1-201ENST00000284041 ITPR1Q14643 2758 aa1.52□□□□□ -2.17
SREK1-201ENST00000284041 CHD9Q3L8U1 2897 aa1.52□□□□□ -2.17
SREK1-201ENST00000284041 CELSR1Q9NYQ6 3014 aa1.52□□□□□ -2.17
SREK1-201ENST00000284041 ZZEF1O43149 2961 aa1.52□□□□□ -2.17
SREK1-201ENST00000284041 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
SREK1-201ENST00000284041 UBR5O95071 2799 aaPredicted RBP1.52□□□□□ -2.17
SREK1-201ENST00000284041 TENM4Q6N022 2769 aa1.52□□□□□ -2.17
SREK1-201ENST00000284041 DEFB124Q8NES8 71 aa1.51□□□□□ -2.17
SREK1-201ENST00000284041 LRP1Q07954 4544 aaKnown RBP1.51□□□□□ -2.17
SREK1-201ENST00000284041 TRIOO75962 3097 aa1.51□□□□□ -2.17
SREK1-201ENST00000284041 MGAQ8IWI9 3026 aa1.5□□□□□ -2.17
SREK1-201ENST00000284041 DEFB105AQ8NG35 78 aa1.5□□□□□ -2.17
SREK1-201ENST00000284041 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
SREK1-201ENST00000284041 RELNP78509 3460 aa1.5□□□□□ -2.17
SREK1-201ENST00000284041 WDR87Q6ZQQ6 2873 aa1.5□□□□□ -2.17
SREK1-201ENST00000284041 PKD1L1Q8TDX9 2849 aa1.5□□□□□ -2.17
SREK1-201ENST00000284041 CSMD3Q7Z407 3707 aa1.49□□□□□ -2.17
SREK1-201ENST00000284041 LAMA5O15230 3695 aa1.49□□□□□ -2.17
SREK1-201ENST00000284041 PRLHP81277 87 aa1.49□□□□□ -2.17
SREK1-201ENST00000284041 NOP10Q9NPE3 64 aaKnown RBP1.49□□□□□ -2.17
SREK1-201ENST00000284041 AKAP13Q12802 2813 aa1.49□□□□□ -2.17
SREK1-201ENST00000284041 DEFB103AP81534 67 aa1.49□□□□□ -2.17
SREK1-201ENST00000284041 PKDREJQ9NTG1 2253 aa1.49□□□□□ -2.17
SREK1-201ENST00000284041 FAT3Q8TDW7 4589 aa1.49□□□□□ -2.17
SREK1-201ENST00000284041 H3BNG1 76 aa1.48□□□□□ -2.17
SREK1-201ENST00000284041 CENPEQ02224 2701 aa1.48□□□□□ -2.17
SREK1-201ENST00000284041 CFAP47Q6ZTR5 3102 aa1.47□□□□□ -2.17
SREK1-201ENST00000284041 PLECQ15149 4684 aaKnown RBP1.47□□□□□ -2.17
SREK1-201ENST00000284041 PCNTO95613 3336 aa1.46□□□□□ -2.18
SREK1-201ENST00000284041 CD52P31358 61 aa1.46□□□□□ -2.18
SREK1-201ENST00000284041 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.18
SREK1-201ENST00000284041 M0QZ58 72 aa1.46□□□□□ -2.18
SREK1-201ENST00000284041 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
SREK1-201ENST00000284041 PDZD2O15018 2839 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 WDFY3Q8IZQ1 3526 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 UTRNP46939 3433 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms