RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 ITPR2Q14571 2701 aa5.81□□□□□ -1.48
LAMA3-201ENST00000269217 DMXL1Q9Y485 3027 aa5.8□□□□□ -1.48
LAMA3-201ENST00000269217 A6NN06 94 aa5.79□□□□□ -1.48
LAMA3-201ENST00000269217 KRTAP13-2Q52LG2 175 aa5.77□□□□□ -1.49
LAMA3-201ENST00000269217 LOC400499M0QZD8 3231 aa5.76□□□□□ -1.49
LAMA3-201ENST00000269217 TNRC18O15417 2968 aaPredicted RBP5.76□□□□□ -1.49
LAMA3-201ENST00000269217 STAB2Q8WWQ8 2551 aa5.75□□□□□ -1.49
LAMA3-201ENST00000269217 LRBAP50851 2863 aa5.75□□□□□ -1.49
LAMA3-201ENST00000269217 SPTBN5Q9NRC6 3674 aaKnown RBP5.74□□□□□ -1.49
LAMA3-201ENST00000269217 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
LAMA3-201ENST00000269217 ASH1LQ9NR48 2969 aaKnown RBP5.74□□□□□ -1.49
LAMA3-201ENST00000269217 UTP20O75691 2785 aaKnown RBP5.73□□□□□ -1.49
LAMA3-201ENST00000269217 MYO15AQ9UKN7 3530 aa5.73□□□□□ -1.49
LAMA3-201ENST00000269217 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
LAMA3-201ENST00000269217 ZANQ9Y493 2812 aa5.72□□□□□ -1.49
LAMA3-201ENST00000269217 A8MU10 97 aa5.72□□□□□ -1.49
LAMA3-201ENST00000269217 KMT2BQ9UMN6 2715 aaPredicted RBP5.69□□□□□ -1.5
LAMA3-201ENST00000269217 A8MUU9 505 aa5.68□□□□□ -1.5
LAMA3-201ENST00000269217 CELSR2Q9HCU4 2923 aa5.66□□□□□ -1.5
LAMA3-201ENST00000269217 NF1P21359 2839 aa5.62□□□□□ -1.51
LAMA3-201ENST00000269217 USP34Q70CQ2 3546 aa5.62□□□□□ -1.51
LAMA3-201ENST00000269217 C20orf166-AS1Q96NR2 134 aa5.6□□□□□ -1.51
LAMA3-201ENST00000269217 HIVEP1P15822 2718 aa5.6□□□□□ -1.51
LAMA3-201ENST00000269217 APCP25054 2843 aa5.6□□□□□ -1.51
LAMA3-201ENST00000269217 MUC3AQ02505 3323 aa5.59□□□□□ -1.51
LAMA3-201ENST00000269217 CRYBG3Q68DQ2 2970 aa5.59□□□□□ -1.52
LAMA3-201ENST00000269217 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
LAMA3-201ENST00000269217 DCHS2Q6V1P9 2916 aa5.56□□□□□ -1.52
LAMA3-201ENST00000269217 NIPBLQ6KC79 2804 aaeCLIP5.56□□□□□ -1.52
LAMA3-201ENST00000269217 FBN2P35556 2912 aa5.53□□□□□ -1.52
LAMA3-201ENST00000269217 TENM4Q6N022 2769 aa5.52□□□□□ -1.53
LAMA3-201ENST00000269217 DCHS1Q96JQ0 3298 aa5.52□□□□□ -1.53
LAMA3-201ENST00000269217 KRTAP21-3Q3LHN1 58 aa5.51□□□□□ -1.53
LAMA3-201ENST00000269217 KRTAP1-4P0C5Y4 121 aa5.5□□□□□ -1.53
LAMA3-201ENST00000269217 NDUFAF8A1L188 74 aa5.49□□□□□ -1.53
LAMA3-201ENST00000269217 TNP1P09430 55 aa5.49□□□□□ -1.53
LAMA3-201ENST00000269217 WDFY3Q8IZQ1 3526 aa5.49□□□□□ -1.53
LAMA3-201ENST00000269217 RELNP78509 3460 aa5.48□□□□□ -1.53
LAMA3-201ENST00000269217 HRNRQ86YZ3 2850 aaPredicted RBP5.45□□□□□ -1.54
LAMA3-201ENST00000269217 ASPMQ8IZT6 3477 aa5.44□□□□□ -1.54
LAMA3-201ENST00000269217 LAMA5O15230 3695 aa5.43□□□□□ -1.54
LAMA3-201ENST00000269217 XP32Q5T750 250 aa5.43□□□□□ -1.54
LAMA3-201ENST00000269217 H0YAA0 97 aa5.39□□□□□ -1.55
LAMA3-201ENST00000269217 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
LAMA3-201ENST00000269217 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
LAMA3-201ENST00000269217 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
LAMA3-201ENST00000269217 DMDP11532 3685 aa5.33□□□□□ -1.56
LAMA3-201ENST00000269217 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
LAMA3-201ENST00000269217 ZFHX4Q86UP3 3567 aa5.29□□□□□ -1.56
LAMA3-201ENST00000269217 CELSR1Q9NYQ6 3014 aa5.28□□□□□ -1.56
LAMA3-201ENST00000269217 TENM3Q9P273 2699 aa5.28□□□□□ -1.56
LAMA3-201ENST00000269217 P0C880 135 aa5.27□□□□□ -1.57
LAMA3-201ENST00000269217 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
LAMA3-201ENST00000269217 KRTAP13-3Q3SY46 172 aa5.26□□□□□ -1.57
LAMA3-201ENST00000269217 PKD1L1Q8TDX9 2849 aa5.24□□□□□ -1.57
LAMA3-201ENST00000269217 A0A1B0GVY2 172 aa5.24□□□□□ -1.57
LAMA3-201ENST00000269217 FBN1P35555 2871 aaKnown RBP5.21□□□□□ -1.57
LAMA3-201ENST00000269217 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
LAMA3-201ENST00000269217 SMG1Q96Q15 3661 aaKnown RBP5.16□□□□□ -1.58
LAMA3-201ENST00000269217 OTOGQ6ZRI0 2925 aa5.15□□□□□ -1.58
LAMA3-201ENST00000269217 KRTAP10-10P60014 251 aa5.14□□□□□ -1.59
LAMA3-201ENST00000269217 TGP01266 2768 aa5.14□□□□□ -1.59
LAMA3-201ENST00000269217 PDZD2O15018 2839 aa5.13□□□□□ -1.59
LAMA3-201ENST00000269217 CUBNO60494 3623 aa5.13□□□□□ -1.59
LAMA3-201ENST00000269217 VWFP04275 2813 aa5.12□□□□□ -1.59
LAMA3-201ENST00000269217 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
LAMA3-201ENST00000269217 ZFHX3Q15911 3703 aa5.1□□□□□ -1.59
LAMA3-201ENST00000269217 TENM2Q9NT68 2774 aa5.1□□□□□ -1.59
LAMA3-201ENST00000269217 CSMD1Q96PZ7 3565 aa5.06□□□□□ -1.6
LAMA3-201ENST00000269217 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
LAMA3-201ENST00000269217 SVEP1Q4LDE5 3571 aa5.04□□□□□ -1.6
LAMA3-201ENST00000269217 SRRM2Q9UQ35 2752 aaKnown RBP5.04□□□□□ -1.6
LAMA3-201ENST00000269217 CSMD2Q7Z408 3487 aa4.99□□□□□ -1.61
LAMA3-201ENST00000269217 NBPF19A0A087WUL8 3843 aa4.98□□□□□ -1.61
LAMA3-201ENST00000269217 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
LAMA3-201ENST00000269217 KRTAP13-4Q3LI77 160 aa4.98□□□□□ -1.61
LAMA3-201ENST00000269217 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
LAMA3-201ENST00000269217 SPENQ96T58 3664 aaKnown RBP4.9□□□□□ -1.63
LAMA3-201ENST00000269217 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
LAMA3-201ENST00000269217 TRRAPQ9Y4A5 3859 aa4.74□□□□□ -1.65
LAMA3-201ENST00000269217 FBN3Q75N90 2809 aa4.74□□□□□ -1.65
LAMA3-201ENST00000269217 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.65
LAMA3-201ENST00000269217 COL7A1Q02388 2944 aa4.69□□□□□ -1.66
LAMA3-201ENST00000269217 ANK3Q12955 4377 aaKnown RBP4.68□□□□□ -1.66
LAMA3-201ENST00000269217 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
LAMA3-201ENST00000269217 BSNQ9UPA5 3926 aa4.67□□□□□ -1.66
LAMA3-201ENST00000269217 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
LAMA3-201ENST00000269217 MEGF8Q7Z7M0 2845 aa4.66□□□□□ -1.66
LAMA3-201ENST00000269217 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
LAMA3-201ENST00000269217 KRTAP10-4P60372 401 aaPredicted RBP4.58□□□□□ -1.68
LAMA3-201ENST00000269217 INE1O15225 51 aa4.52□□□□□ -1.69
LAMA3-201ENST00000269217 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
LAMA3-201ENST00000269217 VPS13CQ709C8 3753 aa4.5□□□□□ -1.69
LAMA3-201ENST00000269217 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
LAMA3-201ENST00000269217 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
LAMA3-201ENST00000269217 ZNF469Q96JG9 3925 aaPredicted RBP4.45□□□□□ -1.7
LAMA3-201ENST00000269217 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
LAMA3-201ENST00000269217 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
LAMA3-201ENST00000269217 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
LAMA3-201ENST00000269217 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms