RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 NBEAQ8NFP9 2946 aa7.87□□□□□ -1.15
PTPN23-201ENST00000265562 COL12A1Q99715 3063 aa7.87□□□□□ -1.15
PTPN23-201ENST00000265562 Q6ZRN7 208 aaPredicted RBP7.86□□□□□ -1.15
PTPN23-201ENST00000265562 FREM2Q5SZK8 3169 aa7.86□□□□□ -1.15
PTPN23-201ENST00000265562 COL6A3P12111 3177 aa7.85□□□□□ -1.15
PTPN23-201ENST00000265562 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
PTPN23-201ENST00000265562 DMXL2Q8TDJ6 3036 aa7.82□□□□□ -1.16
PTPN23-201ENST00000265562 KALRNO60229 2985 aa7.81□□□□□ -1.16
PTPN23-201ENST00000265562 A8MUU9 505 aa7.81□□□□□ -1.16
PTPN23-201ENST00000265562 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
PTPN23-201ENST00000265562 MUC3AQ02505 3323 aa7.8□□□□□ -1.16
PTPN23-201ENST00000265562 ADGRG4Q8IZF6 3080 aa7.77□□□□□ -1.17
PTPN23-201ENST00000265562 BOD1L1Q8NFC6 3051 aa7.76□□□□□ -1.17
PTPN23-201ENST00000265562 HIVEP1P15822 2718 aa7.75□□□□□ -1.17
PTPN23-201ENST00000265562 UTP20O75691 2785 aaKnown RBP7.74□□□□□ -1.17
PTPN23-201ENST00000265562 KMT2BQ9UMN6 2715 aaPredicted RBP7.73□□□□□ -1.17
PTPN23-201ENST00000265562 DMDP11532 3685 aa7.71□□□□□ -1.18
PTPN23-201ENST00000265562 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
PTPN23-201ENST00000265562 TENM4Q6N022 2769 aa7.68□□□□□ -1.18
PTPN23-201ENST00000265562 NIPBLQ6KC79 2804 aaeCLIP7.68□□□□□ -1.189e-7■■■■□ 19.5
PTPN23-201ENST00000265562 ASH1LQ9NR48 2969 aaKnown RBP7.67□□□□□ -1.18
PTPN23-201ENST00000265562 ZZEF1O43149 2961 aa7.66□□□□□ -1.18
PTPN23-201ENST00000265562 LRBAP50851 2863 aa7.65□□□□□ -1.18
PTPN23-201ENST00000265562 TNRC18O15417 2968 aaPredicted RBP7.64□□□□□ -1.19
PTPN23-201ENST00000265562 APCP25054 2843 aa7.62□□□□□ -1.19
PTPN23-201ENST00000265562 CELSR2Q9HCU4 2923 aa7.61□□□□□ -1.19
PTPN23-201ENST00000265562 H0YAA0 97 aa7.57□□□□□ -1.2
PTPN23-201ENST00000265562 LOC400499M0QZD8 3231 aa7.57□□□□□ -1.2
PTPN23-201ENST00000265562 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
PTPN23-201ENST00000265562 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
PTPN23-201ENST00000265562 TNP1P09430 55 aa7.54□□□□□ -1.2
PTPN23-201ENST00000265562 ZANQ9Y493 2812 aa7.54□□□□□ -1.2
PTPN23-201ENST00000265562 CFAP47Q6ZTR5 3102 aa7.53□□□□□ -1.2
PTPN23-201ENST00000265562 DCHS2Q6V1P9 2916 aa7.51□□□□□ -1.21
PTPN23-201ENST00000265562 ASPMQ8IZT6 3477 aa7.49□□□□□ -1.21
PTPN23-201ENST00000265562 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
PTPN23-201ENST00000265562 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
PTPN23-201ENST00000265562 DMXL1Q9Y485 3027 aa7.45□□□□□ -1.22
PTPN23-201ENST00000265562 P0C880 135 aa7.44□□□□□ -1.22
PTPN23-201ENST00000265562 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
PTPN23-201ENST00000265562 ZFHX4Q86UP3 3567 aa7.4□□□□□ -1.23
PTPN23-201ENST00000265562 HRNRQ86YZ3 2850 aaPredicted RBP7.37□□□□□ -1.23
PTPN23-201ENST00000265562 SPENQ96T58 3664 aaKnown RBP7.34□□□□□ -1.23
PTPN23-201ENST00000265562 NF1P21359 2839 aa7.33□□□□□ -1.24
PTPN23-201ENST00000265562 XP32Q5T750 250 aa7.32□□□□□ -1.24
PTPN23-201ENST00000265562 FBN2P35556 2912 aa7.31□□□□□ -1.24
PTPN23-201ENST00000265562 TENM3Q9P273 2699 aa7.3□□□□□ -1.24
PTPN23-201ENST00000265562 DCHS1Q96JQ0 3298 aa7.29□□□□□ -1.24
PTPN23-201ENST00000265562 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
PTPN23-201ENST00000265562 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
PTPN23-201ENST00000265562 LAMA5O15230 3695 aa7.25□□□□□ -1.25
PTPN23-201ENST00000265562 RELNP78509 3460 aa7.23□□□□□ -1.25
PTPN23-201ENST00000265562 SMG1Q96Q15 3661 aaKnown RBP7.22□□□□□ -1.25
PTPN23-201ENST00000265562 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
PTPN23-201ENST00000265562 CSMD1Q96PZ7 3565 aa7.19□□□□□ -1.26
PTPN23-201ENST00000265562 MXRA5Q9NR99 2828 aa7.12□□□□□ -1.27
PTPN23-201ENST00000265562 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
PTPN23-201ENST00000265562 TGP01266 2768 aa7.09□□□□□ -1.27
PTPN23-201ENST00000265562 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
PTPN23-201ENST00000265562 CELSR1Q9NYQ6 3014 aa7.08□□□□□ -1.28
PTPN23-201ENST00000265562 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
PTPN23-201ENST00000265562 PKD1L1Q8TDX9 2849 aa7.06□□□□□ -1.28
PTPN23-201ENST00000265562 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
PTPN23-201ENST00000265562 SVEP1Q4LDE5 3571 aa6.99□□□□□ -1.29
PTPN23-201ENST00000265562 KRTAP12-1P59990 96 aa6.92□□□□□ -1.3
PTPN23-201ENST00000265562 VWFP04275 2813 aa6.9□□□□□ -1.3
PTPN23-201ENST00000265562 KRTAP13-4Q3LI77 160 aa6.89□□□□□ -1.31
PTPN23-201ENST00000265562 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
PTPN23-201ENST00000265562 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
PTPN23-201ENST00000265562 BSNQ9UPA5 3926 aa6.87□□□□□ -1.31
PTPN23-201ENST00000265562 PDZD2O15018 2839 aa6.86□□□□□ -1.31
PTPN23-201ENST00000265562 ZFHX3Q15911 3703 aa6.84□□□□□ -1.31
PTPN23-201ENST00000265562 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
PTPN23-201ENST00000265562 FBN1P35555 2871 aaKnown RBP6.8□□□□□ -1.32
PTPN23-201ENST00000265562 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
PTPN23-201ENST00000265562 OTOGQ6ZRI0 2925 aa6.7□□□□□ -1.34
PTPN23-201ENST00000265562 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
PTPN23-201ENST00000265562 SRRM2Q9UQ35 2752 aaKnown RBP6.7□□□□□ -1.34
PTPN23-201ENST00000265562 CUBNO60494 3623 aa6.67□□□□□ -1.34
PTPN23-201ENST00000265562 VPS13CQ709C8 3753 aa6.67□□□□□ -1.34
PTPN23-201ENST00000265562 NBPF19A0A087WUL8 3843 aa6.66□□□□□ -1.34
PTPN23-201ENST00000265562 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
PTPN23-201ENST00000265562 ANK3Q12955 4377 aaKnown RBP6.53□□□□□ -1.36
PTPN23-201ENST00000265562 FBN3Q75N90 2809 aa6.49□□□□□ -1.37
PTPN23-201ENST00000265562 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
PTPN23-201ENST00000265562 INE1O15225 51 aa6.45□□□□□ -1.38
PTPN23-201ENST00000265562 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
PTPN23-201ENST00000265562 COL7A1Q02388 2944 aa6.37□□□□□ -1.39
PTPN23-201ENST00000265562 MEGF8Q7Z7M0 2845 aa6.36□□□□□ -1.39
PTPN23-201ENST00000265562 TRRAPQ9Y4A5 3859 aa6.35□□□□□ -1.39
PTPN23-201ENST00000265562 AKAP9Q99996 3911 aa6.27□□□□□ -1.41
PTPN23-201ENST00000265562 ZNF469Q96JG9 3925 aaPredicted RBP6.24□□□□□ -1.41
PTPN23-201ENST00000265562 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
PTPN23-201ENST00000265562 KRTAP10-12P60413 245 aa6.15□□□□□ -1.43
PTPN23-201ENST00000265562 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
PTPN23-201ENST00000265562 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
PTPN23-201ENST00000265562 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
PTPN23-201ENST00000265562 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
PTPN23-201ENST00000265562 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
PTPN23-201ENST00000265562 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms