RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MAP1AP78559 2803 aaPredicted RBP9.49□□□□□ -0.89
COL5A3-201ENST00000264828 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.89
COL5A3-201ENST00000264828 LAMA1P25391 3075 aa9.46□□□□□ -0.9
COL5A3-201ENST00000264828 UBR5O95071 2799 aaPredicted RBP9.45□□□□□ -0.9
COL5A3-201ENST00000264828 P0C880 135 aa9.45□□□□□ -0.9
COL5A3-201ENST00000264828 TNRC18O15417 2968 aaPredicted RBP9.44□□□□□ -0.9
COL5A3-201ENST00000264828 ITPR2Q14571 2701 aa9.42□□□□□ -0.9
COL5A3-201ENST00000264828 APCP25054 2843 aa9.4□□□□□ -0.91
COL5A3-201ENST00000264828 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.91
COL5A3-201ENST00000264828 NSD1Q96L73 2696 aaPredicted RBP9.38□□□□□ -0.91
COL5A3-201ENST00000264828 LRBAP50851 2863 aa9.36□□□□□ -0.91
COL5A3-201ENST00000264828 USP34Q70CQ2 3546 aa9.34□□□□□ -0.91
COL5A3-201ENST00000264828 ASH1LQ9NR48 2969 aaKnown RBP9.29□□□□□ -0.92
COL5A3-201ENST00000264828 ITPR1Q14643 2758 aa9.28□□□□□ -0.92
COL5A3-201ENST00000264828 DMXL2Q8TDJ6 3036 aa9.28□□□□□ -0.92
COL5A3-201ENST00000264828 KRTAP10-10P60014 251 aa9.27□□□□□ -0.93
COL5A3-201ENST00000264828 UTP20O75691 2785 aaKnown RBP9.26□□□□□ -0.93
COL5A3-201ENST00000264828 HIVEP1P15822 2718 aa9.26□□□□□ -0.93
COL5A3-201ENST00000264828 EYSQ5T1H1 3165 aa9.25□□□□□ -0.93
COL5A3-201ENST00000264828 TACC2O95359 2948 aa9.23□□□□□ -0.93
COL5A3-201ENST00000264828 ATMQ13315 3056 aa9.2□□□□□ -0.94
COL5A3-201ENST00000264828 CFAP47Q6ZTR5 3102 aa9.2□□□□□ -0.94
COL5A3-201ENST00000264828 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
COL5A3-201ENST00000264828 REV3LO60673 3130 aa9.18□□□□□ -0.94
COL5A3-201ENST00000264828 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
COL5A3-201ENST00000264828 CRYBG3Q68DQ2 2970 aa9.18□□□□□ -0.94
COL5A3-201ENST00000264828 NBEAQ8NFP9 2946 aa9.13□□□□□ -0.95
COL5A3-201ENST00000264828 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
COL5A3-201ENST00000264828 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
COL5A3-201ENST00000264828 ADGRG4Q8IZF6 3080 aa9.09□□□□□ -0.95
COL5A3-201ENST00000264828 COL12A1Q99715 3063 aa9.09□□□□□ -0.95
COL5A3-201ENST00000264828 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
COL5A3-201ENST00000264828 FRYLO94915 3013 aa9.04□□□□□ -0.96
COL5A3-201ENST00000264828 ZZEF1O43149 2961 aa9□□□□□ -0.97
COL5A3-201ENST00000264828 SPEGQ15772 3267 aa8.97□□□□□ -0.97
COL5A3-201ENST00000264828 DMXL1Q9Y485 3027 aa8.96□□□□□ -0.98
COL5A3-201ENST00000264828 HRNRQ86YZ3 2850 aaPredicted RBP8.95□□□□□ -0.98
COL5A3-201ENST00000264828 MYO15AQ9UKN7 3530 aa8.93□□□□□ -0.98
COL5A3-201ENST00000264828 CELSR2Q9HCU4 2923 aa8.92□□□□□ -0.98
COL5A3-201ENST00000264828 FLNCQ14315 2725 aa8.89□□□□□ -0.99
COL5A3-201ENST00000264828 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
COL5A3-201ENST00000264828 TENM4Q6N022 2769 aa8.82□□□□□ -1
COL5A3-201ENST00000264828 DCHS2Q6V1P9 2916 aa8.8□□□□□ -1
COL5A3-201ENST00000264828 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
COL5A3-201ENST00000264828 NIPBLQ6KC79 2804 aaeCLIP8.77□□□□□ -1
COL5A3-201ENST00000264828 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
COL5A3-201ENST00000264828 ANK3Q12955 4377 aaKnown RBP8.74□□□□□ -1.01
COL5A3-201ENST00000264828 LOC400499M0QZD8 3231 aa8.73□□□□□ -1.01
COL5A3-201ENST00000264828 TGP01266 2768 aa8.72□□□□□ -1.01
COL5A3-201ENST00000264828 NBPF19A0A087WUL8 3843 aa8.68□□□□□ -1.02
COL5A3-201ENST00000264828 WDFY3Q8IZQ1 3526 aa8.67□□□□□ -1.02
COL5A3-201ENST00000264828 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
COL5A3-201ENST00000264828 ZANQ9Y493 2812 aa8.59□□□□□ -1.03
COL5A3-201ENST00000264828 ZFHX4Q86UP3 3567 aa8.59□□□□□ -1.03
COL5A3-201ENST00000264828 RELNP78509 3460 aa8.58□□□□□ -1.04
COL5A3-201ENST00000264828 KRTAP15-1Q3LI76 137 aa8.58□□□□□ -1.04
COL5A3-201ENST00000264828 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
COL5A3-201ENST00000264828 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
COL5A3-201ENST00000264828 FBN2P35556 2912 aa8.56□□□□□ -1.04
COL5A3-201ENST00000264828 NF1P21359 2839 aa8.53□□□□□ -1.04
COL5A3-201ENST00000264828 CELSR1Q9NYQ6 3014 aa8.52□□□□□ -1.04
COL5A3-201ENST00000264828 DCHS1Q96JQ0 3298 aa8.51□□□□□ -1.05
COL5A3-201ENST00000264828 DMDP11532 3685 aa8.49□□□□□ -1.05
COL5A3-201ENST00000264828 LAMA5O15230 3695 aa8.43□□□□□ -1.06
COL5A3-201ENST00000264828 PDZD2O15018 2839 aa8.42□□□□□ -1.06
COL5A3-201ENST00000264828 TENM3Q9P273 2699 aa8.42□□□□□ -1.06
COL5A3-201ENST00000264828 CSMD1Q96PZ7 3565 aa8.41□□□□□ -1.06
COL5A3-201ENST00000264828 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
COL5A3-201ENST00000264828 ALMS1Q8TCU4 4167 aa8.34□□□□□ -1.07
COL5A3-201ENST00000264828 SMG1Q96Q15 3661 aaKnown RBP8.33□□□□□ -1.08
COL5A3-201ENST00000264828 HUWE1Q7Z6Z7 4374 aaKnown RBP8.32□□□□□ -1.08
COL5A3-201ENST00000264828 BSNQ9UPA5 3926 aa8.25□□□□□ -1.09
COL5A3-201ENST00000264828 MXRA5Q9NR99 2828 aa8.22□□□□□ -1.09
COL5A3-201ENST00000264828 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.09
COL5A3-201ENST00000264828 PKD1L1Q8TDX9 2849 aa8.17□□□□□ -1.1
COL5A3-201ENST00000264828 VWFP04275 2813 aa8.16□□□□□ -1.1
COL5A3-201ENST00000264828 MT1HL1P0DM35 61 aa8.14□□□□□ -1.11
COL5A3-201ENST00000264828 SPENQ96T58 3664 aaKnown RBP8.13□□□□□ -1.11
COL5A3-201ENST00000264828 INE1O15225 51 aa8.1□□□□□ -1.11
COL5A3-201ENST00000264828 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
COL5A3-201ENST00000264828 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
COL5A3-201ENST00000264828 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
COL5A3-201ENST00000264828 SVEP1Q4LDE5 3571 aa8.04□□□□□ -1.12
COL5A3-201ENST00000264828 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
COL5A3-201ENST00000264828 KRTAP4-5Q9BYR2 181 aa8.01□□□□□ -1.13
COL5A3-201ENST00000264828 AKAP9Q99996 3911 aa8.01□□□□□ -1.13
COL5A3-201ENST00000264828 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
COL5A3-201ENST00000264828 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
COL5A3-201ENST00000264828 TRRAPQ9Y4A5 3859 aa7.9□□□□□ -1.14
COL5A3-201ENST00000264828 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.14
COL5A3-201ENST00000264828 ZFHX3Q15911 3703 aa7.89□□□□□ -1.15
COL5A3-201ENST00000264828 KRTAP12-3P60328 96 aa7.84□□□□□ -1.16
COL5A3-201ENST00000264828 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
COL5A3-201ENST00000264828 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
COL5A3-201ENST00000264828 MUC3AQ02505 3323 aa7.79□□□□□ -1.16
COL5A3-201ENST00000264828 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
COL5A3-201ENST00000264828 DNAH9Q9NYC9 4486 aa7.78□□□□□ -1.16
COL5A3-201ENST00000264828 FBN3Q75N90 2809 aa7.78□□□□□ -1.16
COL5A3-201ENST00000264828 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
COL5A3-201ENST00000264828 CUBNO60494 3623 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms