RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 BAHCC1Q9P281 2608 aa9.88□□□□□ -0.83
ITGA6-201ENST00000264107 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
ITGA6-201ENST00000264107 NSD1Q96L73 2696 aaPredicted RBP9.86□□□□□ -0.83
ITGA6-201ENST00000264107 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
ITGA6-201ENST00000264107 ITPR2Q14571 2701 aa9.83□□□□□ -0.84
ITGA6-201ENST00000264107 DMXL2Q8TDJ6 3036 aa9.81□□□□□ -0.84
ITGA6-201ENST00000264107 PP632Q6XCG6 107 aa9.79□□□□□ -0.84
ITGA6-201ENST00000264107 TNP1P09430 55 aa9.78□□□□□ -0.84
ITGA6-201ENST00000264107 COL6A3P12111 3177 aa9.77□□□□□ -0.84
ITGA6-201ENST00000264107 LRBAP50851 2863 aa9.77□□□□□ -0.84
ITGA6-201ENST00000264107 Q6ZRN7 208 aaPredicted RBP9.69□□□□□ -0.86
ITGA6-201ENST00000264107 UTP20O75691 2785 aaKnown RBP9.69□□□□□ -0.86
ITGA6-201ENST00000264107 KRTAP10-8P60410 259 aa9.69□□□□□ -0.86
ITGA6-201ENST00000264107 Q5VSD8 79 aa9.66□□□□□ -0.86
ITGA6-201ENST00000264107 ASH1LQ9NR48 2969 aaKnown RBP9.65□□□□□ -0.86
ITGA6-201ENST00000264107 REV3LO60673 3130 aa9.65□□□□□ -0.86
ITGA6-201ENST00000264107 ZZEF1O43149 2961 aa9.63□□□□□ -0.87
ITGA6-201ENST00000264107 HIVEP1P15822 2718 aa9.62□□□□□ -0.87
ITGA6-201ENST00000264107 APCP25054 2843 aa9.59□□□□□ -0.87
ITGA6-201ENST00000264107 SPTBN5Q9NRC6 3674 aaKnown RBP9.58□□□□□ -0.88
ITGA6-201ENST00000264107 EYSQ5T1H1 3165 aa9.57□□□□□ -0.88
ITGA6-201ENST00000264107 CFAP47Q6ZTR5 3102 aa9.57□□□□□ -0.88
ITGA6-201ENST00000264107 SPEGQ15772 3267 aa9.56□□□□□ -0.88
ITGA6-201ENST00000264107 NIPBLQ6KC79 2804 aaeCLIP9.53□□□□□ -0.88
ITGA6-201ENST00000264107 CELSR2Q9HCU4 2923 aa9.51□□□□□ -0.89
ITGA6-201ENST00000264107 TNRC18O15417 2968 aaPredicted RBP9.51□□□□□ -0.89
ITGA6-201ENST00000264107 ZANQ9Y493 2812 aa9.5□□□□□ -0.89
ITGA6-201ENST00000264107 KMT2BQ9UMN6 2715 aaPredicted RBP9.48□□□□□ -0.89
ITGA6-201ENST00000264107 DMXL1Q9Y485 3027 aa9.47□□□□□ -0.89
ITGA6-201ENST00000264107 USP34Q70CQ2 3546 aa9.44□□□□□ -0.9
ITGA6-201ENST00000264107 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
ITGA6-201ENST00000264107 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
ITGA6-201ENST00000264107 TENM4Q6N022 2769 aa9.43□□□□□ -0.9
ITGA6-201ENST00000264107 DCHS2Q6V1P9 2916 aa9.4□□□□□ -0.9
ITGA6-201ENST00000264107 CRYBG3Q68DQ2 2970 aa9.38□□□□□ -0.91
ITGA6-201ENST00000264107 LOC400499M0QZD8 3231 aa9.37□□□□□ -0.91
ITGA6-201ENST00000264107 HRNRQ86YZ3 2850 aaPredicted RBP9.34□□□□□ -0.91
ITGA6-201ENST00000264107 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
ITGA6-201ENST00000264107 KRTAP1-4P0C5Y4 121 aa9.25□□□□□ -0.93
ITGA6-201ENST00000264107 FBN2P35556 2912 aa9.24□□□□□ -0.93
ITGA6-201ENST00000264107 NF1P21359 2839 aa9.23□□□□□ -0.93
ITGA6-201ENST00000264107 MYO15AQ9UKN7 3530 aa9.18□□□□□ -0.94
ITGA6-201ENST00000264107 XP32Q5T750 250 aa9.13□□□□□ -0.95
ITGA6-201ENST00000264107 KRTAP21-3Q3LHN1 58 aa9.13□□□□□ -0.95
ITGA6-201ENST00000264107 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
ITGA6-201ENST00000264107 TGP01266 2768 aa9.1□□□□□ -0.95
ITGA6-201ENST00000264107 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
ITGA6-201ENST00000264107 MXRA5Q9NR99 2828 aa9□□□□□ -0.97
ITGA6-201ENST00000264107 KRTAP13-4Q3LI77 160 aa8.98□□□□□ -0.97
ITGA6-201ENST00000264107 RELNP78509 3460 aa8.98□□□□□ -0.97
ITGA6-201ENST00000264107 TENM3Q9P273 2699 aa8.93□□□□□ -0.98
ITGA6-201ENST00000264107 CELSR1Q9NYQ6 3014 aa8.92□□□□□ -0.98
ITGA6-201ENST00000264107 A0A1B0GVY2 172 aa8.9□□□□□ -0.98
ITGA6-201ENST00000264107 DCHS1Q96JQ0 3298 aa8.89□□□□□ -0.99
ITGA6-201ENST00000264107 TENM1Q9UKZ4 2725 aa8.88□□□□□ -0.99
ITGA6-201ENST00000264107 KRTAP3-1Q9BYR8 98 aa8.87□□□□□ -0.99
ITGA6-201ENST00000264107 WDFY3Q8IZQ1 3526 aa8.86□□□□□ -0.99
ITGA6-201ENST00000264107 INE1O15225 51 aa8.8□□□□□ -1
ITGA6-201ENST00000264107 TENM2Q9NT68 2774 aa8.78□□□□□ -1
ITGA6-201ENST00000264107 LAMA5O15230 3695 aa8.76□□□□□ -1.01
ITGA6-201ENST00000264107 KRTAP10-6P60371 365 aaPredicted RBP8.75□□□□□ -1.01
ITGA6-201ENST00000264107 ZFHX4Q86UP3 3567 aa8.72□□□□□ -1.01
ITGA6-201ENST00000264107 PRO2289Q9P1D8 64 aa8.72□□□□□ -1.01
ITGA6-201ENST00000264107 ASPMQ8IZT6 3477 aa8.69□□□□□ -1.02
ITGA6-201ENST00000264107 PKD1L1Q8TDX9 2849 aa8.69□□□□□ -1.02
ITGA6-201ENST00000264107 PDZD2O15018 2839 aa8.64□□□□□ -1.03
ITGA6-201ENST00000264107 MUC3AQ02505 3323 aa8.56□□□□□ -1.04
ITGA6-201ENST00000264107 KRTAP10-10P60014 251 aa8.55□□□□□ -1.04
ITGA6-201ENST00000264107 DMDP11532 3685 aa8.55□□□□□ -1.04
ITGA6-201ENST00000264107 VWFP04275 2813 aa8.52□□□□□ -1.04
ITGA6-201ENST00000264107 FBN1P35555 2871 aaKnown RBP8.52□□□□□ -1.05
ITGA6-201ENST00000264107 CSMD1Q96PZ7 3565 aa8.48□□□□□ -1.05
ITGA6-201ENST00000264107 NBPF19A0A087WUL8 3843 aa8.47□□□□□ -1.05
ITGA6-201ENST00000264107 OTOGQ6ZRI0 2925 aa8.47□□□□□ -1.05
ITGA6-201ENST00000264107 SMG1Q96Q15 3661 aaKnown RBP8.43□□□□□ -1.06
ITGA6-201ENST00000264107 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.07
ITGA6-201ENST00000264107 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
ITGA6-201ENST00000264107 ZFHX3Q15911 3703 aa8.34□□□□□ -1.07
ITGA6-201ENST00000264107 SVEP1Q4LDE5 3571 aa8.28□□□□□ -1.08
ITGA6-201ENST00000264107 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
ITGA6-201ENST00000264107 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
ITGA6-201ENST00000264107 CSMD2Q7Z408 3487 aa8.18□□□□□ -1.1
ITGA6-201ENST00000264107 FBN3Q75N90 2809 aa8.14□□□□□ -1.11
ITGA6-201ENST00000264107 CUBNO60494 3623 aa8.14□□□□□ -1.11
ITGA6-201ENST00000264107 SPENQ96T58 3664 aaKnown RBP8.1□□□□□ -1.11
ITGA6-201ENST00000264107 TRRAPQ9Y4A5 3859 aa8.05□□□□□ -1.12
ITGA6-201ENST00000264107 MEGF8Q7Z7M0 2845 aa7.98□□□□□ -1.13
ITGA6-201ENST00000264107 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
ITGA6-201ENST00000264107 BSNQ9UPA5 3926 aa7.91□□□□□ -1.14
ITGA6-201ENST00000264107 COL7A1Q02388 2944 aa7.9□□□□□ -1.14
ITGA6-201ENST00000264107 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
ITGA6-201ENST00000264107 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
ITGA6-201ENST00000264107 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
ITGA6-201ENST00000264107 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
ITGA6-201ENST00000264107 HUWE1Q7Z6Z7 4374 aaKnown RBP7.69□□□□□ -1.18
ITGA6-201ENST00000264107 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.18
ITGA6-201ENST00000264107 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
ITGA6-201ENST00000264107 VPS13CQ709C8 3753 aa7.63□□□□□ -1.19
ITGA6-201ENST00000264107 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
ITGA6-201ENST00000264107 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms