RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 RETNLBQ9BQ08 111 aa12.76□□□□□ -0.37
UFD1-201ENST00000263202 DMBT1Q9UGM3 2413 aaPredicted RBP12.76□□□□□ -0.37
UFD1-201ENST00000263202 A0A1B0GVX0 72 aa12.74□□□□□ -0.37
UFD1-201ENST00000263202 J3QL48 77 aa12.72□□□□□ -0.37
UFD1-201ENST00000263202 IGHV6-1A0A0B4J1U7 121 aa12.7□□□□□ -0.38
UFD1-201ENST00000263202 NOTCH2NLQ7Z3S9 236 aa12.65□□□□□ -0.39
UFD1-201ENST00000263202 C8orf17Q9NRJ1 99 aa12.65□□□□□ -0.39
UFD1-201ENST00000263202 MMP24-AS1A0A0U1RRL7 71 aa12.64□□□□□ -0.39
UFD1-201ENST00000263202 HCG22E2RYF7 251 aa12.62□□□□□ -0.39
UFD1-201ENST00000263202 FAM236AA0A1B0GUQ0 79 aa12.61□□□□□ -0.39
UFD1-201ENST00000263202 FAM236BA0A1B0GV22 79 aa12.61□□□□□ -0.39
UFD1-201ENST00000263202 FP248Q71RG6 208 aaPredicted RBP12.61□□□□□ -0.39
UFD1-201ENST00000263202 C8orf87E5RJ46 101 aa12.6□□□□□ -0.39
UFD1-201ENST00000263202 WFDC13Q8IUB5 93 aa12.6□□□□□ -0.39
UFD1-201ENST00000263202 PCLOQ9Y6V0 5065 aa12.59□□□□□ -0.39
UFD1-201ENST00000263202 LINC00313P59037 77 aa12.58□□□□□ -0.4
UFD1-201ENST00000263202 CASC2Q6XLA1 102 aa12.58□□□□□ -0.4
UFD1-201ENST00000263202 hDV103S1A0JD37 113 aa12.55□□□□□ -0.4
UFD1-201ENST00000263202 SCGB1A1P11684 91 aa12.53□□□□□ -0.4
UFD1-201ENST00000263202 IGLV7-46A0A075B6I9 117 aa12.52□□□□□ -0.41
UFD1-201ENST00000263202 PRR4Q16378 134 aa12.51□□□□□ -0.41
UFD1-201ENST00000263202 TMEM254Q8TBM7 123 aa12.5□□□□□ -0.41
UFD1-201ENST00000263202 C9orf92A6NGG3 77 aa12.49□□□□□ -0.41
UFD1-201ENST00000263202 KRTAP16-1A8MUX0 517 aa12.49□□□□□ -0.41
UFD1-201ENST00000263202 MRPL34Q9BQ48 92 aaKnown RBP12.48□□□□□ -0.41
UFD1-201ENST00000263202 ATOX1O00244 68 aa12.43□□□□□ -0.42
UFD1-201ENST00000263202 KRTAP13-3Q3SY46 172 aa12.42□□□□□ -0.42
UFD1-201ENST00000263202 Q8N9P0 234 aaPredicted RBP12.39□□□□□ -0.43
UFD1-201ENST00000263202 OCR1Q9BZK8 76 aa12.37□□□□□ -0.43
UFD1-201ENST00000263202 NDUFS5O43920 106 aa12.37□□□□□ -0.43
UFD1-201ENST00000263202 TPRXLQ17RH7 258 aa12.34□□□□□ -0.43
UFD1-201ENST00000263202 SMIM20Q8N5G0 67 aa12.33□□□□□ -0.44
UFD1-201ENST00000263202 C20orf166-AS1Q96NR2 134 aa12.32□□□□□ -0.44
UFD1-201ENST00000263202 TRAV7A0A075B6U4 112 aa12.3□□□□□ -0.44
UFD1-201ENST00000263202 ANAPC13Q9BS18 74 aa12.3□□□□□ -0.44
UFD1-201ENST00000263202 A8MUU9 505 aa12.3□□□□□ -0.44
UFD1-201ENST00000263202 TP53AIP1Q9HCN2 124 aa12.3□□□□□ -0.44
UFD1-201ENST00000263202 XP32Q5T750 250 aa12.29□□□□□ -0.44
UFD1-201ENST00000263202 SERP2Q8N6R1 65 aa12.27□□□□□ -0.44
UFD1-201ENST00000263202 UQCRQO14949 82 aa12.26□□□□□ -0.45
UFD1-201ENST00000263202 Q75L30 129 aa12.24□□□□□ -0.45
UFD1-201ENST00000263202 Q5W150 140 aa12.2□□□□□ -0.46
UFD1-201ENST00000263202 COX7CP15954 63 aa12.19□□□□□ -0.46
UFD1-201ENST00000263202 LPAP08519 4548 aa12.18□□□□□ -0.46
UFD1-201ENST00000263202 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
UFD1-201ENST00000263202 HERC1Q15751 4861 aa12.17□□□□□ -0.46
UFD1-201ENST00000263202 TRAV22A0A0B4J277 110 aa12.17□□□□□ -0.46
UFD1-201ENST00000263202 C5orf47Q569G3 176 aa12.16□□□□□ -0.46
UFD1-201ENST00000263202 ZCCHC13Q8WW36 166 aaKnown RBP12.15□□□□□ -0.46
UFD1-201ENST00000263202 H0Y9P7 68 aa12.14□□□□□ -0.47
UFD1-201ENST00000263202 PCP4P48539 62 aa12.1□□□□□ -0.47
UFD1-201ENST00000263202 MP68P56378 58 aa12.09□□□□□ -0.47
UFD1-201ENST00000263202 ATP11AUNQ6ZP68 121 aa12.07□□□□□ -0.48
UFD1-201ENST00000263202 C20orf197Q8N268 126 aa12.06□□□□□ -0.48
UFD1-201ENST00000263202 CCDC179H3BU77 68 aa12.05□□□□□ -0.48
UFD1-201ENST00000263202 LINC00208Q96KT6 92 aa12.04□□□□□ -0.48
UFD1-201ENST00000263202 LRP2P98164 4655 aa12.03□□□□□ -0.48
UFD1-201ENST00000263202 A0A0U1RQV1 116 aa12.03□□□□□ -0.48
UFD1-201ENST00000263202 H3BPC8 53 aa12.03□□□□□ -0.48
UFD1-201ENST00000263202 C1orf64Q8NEQ6 169 aa12.02□□□□□ -0.49
UFD1-201ENST00000263202 HMCN2Q8NDA2 5059 aa12.01□□□□□ -0.49
UFD1-201ENST00000263202 SNURFQ9Y675 71 aa12□□□□□ -0.49
UFD1-201ENST00000263202 KLKP1Q107X0 134 aa11.97□□□□□ -0.49
UFD1-201ENST00000263202 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
UFD1-201ENST00000263202 LOC101927531A0A1B0GV80 90 aa11.96□□□□□ -0.49
UFD1-201ENST00000263202 IGKV2-30P06310 120 aa11.95□□□□□ -0.5
UFD1-201ENST00000263202 IGKV2D-30A0A075B6S6 120 aa11.92□□□□□ -0.5
UFD1-201ENST00000263202 CYSTM1Q9H1C7 97 aa11.92□□□□□ -0.5
UFD1-201ENST00000263202 SEC61BP60468 96 aaKnown RBP11.91□□□□□ -0.5
UFD1-201ENST00000263202 CYP4F30PQ9H0H9 118 aa11.91□□□□□ -0.5
UFD1-201ENST00000263202 C7orf65Q6ZTY9 151 aa11.88□□□□□ -0.51
UFD1-201ENST00000263202 SPINK7P58062 85 aa11.86□□□□□ -0.51
UFD1-201ENST00000263202 NDUFC1O43677 76 aa11.8□□□□□ -0.52
UFD1-201ENST00000263202 H7BZZ5 65 aa11.79□□□□□ -0.52
UFD1-201ENST00000263202 MUC17Q685J3 4493 aa11.77□□□□□ -0.52
UFD1-201ENST00000263202 HRES1P13985 223 aa11.72□□□□□ -0.53
UFD1-201ENST00000263202 KRTAP4-1Q9BYQ7 146 aa11.72□□□□□ -0.53
UFD1-201ENST00000263202 C4orf26Q17RF5 130 aa11.64□□□□□ -0.55
UFD1-201ENST00000263202 SPANXA2-OT1Q8N9U9 137 aa11.63□□□□□ -0.55
UFD1-201ENST00000263202 TMEM258P61165 79 aa11.6□□□□□ -0.55
UFD1-201ENST00000263202 MPLKIPQ8TAP9 179 aa11.56□□□□□ -0.56
UFD1-201ENST00000263202 FAM236DA0A1B0GTK5 79 aa11.53□□□□□ -0.56
UFD1-201ENST00000263202 FAM236CP0DP71 79 aa11.53□□□□□ -0.56
UFD1-201ENST00000263202 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
UFD1-201ENST00000263202 KRTAP3-1Q9BYR8 98 aa11.5□□□□□ -0.57
UFD1-201ENST00000263202 DMAC1Q96GE9 116 aa11.49□□□□□ -0.57
UFD1-201ENST00000263202 UBR4Q5T4S7 5183 aa11.49□□□□□ -0.57
UFD1-201ENST00000263202 ATP5EP56381 51 aaPredicted RBP11.49□□□□□ -0.57
UFD1-201ENST00000263202 RBM12B-AS1Q9P1G2 102 aa11.48□□□□□ -0.57
UFD1-201ENST00000263202 A8MUN3 132 aa11.43□□□□□ -0.58
UFD1-201ENST00000263202 MUC2Q02817 5179 aa11.43□□□□□ -0.58
UFD1-201ENST00000263202 ACYP2P14621 99 aa11.38□□□□□ -0.59
UFD1-201ENST00000263202 RNF213Q63HN8 5207 aa11.37□□□□□ -0.59
UFD1-201ENST00000263202 KRTAP19-2Q3LHN2 52 aa11.37□□□□□ -0.59
UFD1-201ENST00000263202 H1FX-AS1Q4G0G2 97 aa11.31□□□□□ -0.6
UFD1-201ENST00000263202 COA5Q86WW8 74 aa11.28□□□□□ -0.6
UFD1-201ENST00000263202 SERP1Q9Y6X1 66 aa11.24□□□□□ -0.61
UFD1-201ENST00000263202 LCE2CQ5TA81 110 aa11.19□□□□□ -0.62
UFD1-201ENST00000263202 CHKB-CPT1BH3BT56 60 aa11.18□□□□□ -0.62
UFD1-201ENST00000263202 S4R3F8 94 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms