RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 A6NN06 94 aa7.89□□□□□ -1.15
CCDC6-201ENST00000263102 CHD6Q8TD26 2715 aa7.88□□□□□ -1.15
CCDC6-201ENST00000263102 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
CCDC6-201ENST00000263102 ADGRG4Q8IZF6 3080 aa7.86□□□□□ -1.15
CCDC6-201ENST00000263102 DMXL2Q8TDJ6 3036 aa7.85□□□□□ -1.15
CCDC6-201ENST00000263102 UNC79Q9P2D8 2635 aa7.83□□□□□ -1.16
CCDC6-201ENST00000263102 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
CCDC6-201ENST00000263102 TACC2O95359 2948 aa7.81□□□□□ -1.16
CCDC6-201ENST00000263102 COL6A5A8TX70 2615 aa7.8□□□□□ -1.16
CCDC6-201ENST00000263102 REV3LO60673 3130 aa7.8□□□□□ -1.16
CCDC6-201ENST00000263102 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
CCDC6-201ENST00000263102 ZZEF1O43149 2961 aa7.74□□□□□ -1.17
CCDC6-201ENST00000263102 ASH1LQ9NR48 2969 aaKnown RBP7.74□□□□□ -1.17
CCDC6-201ENST00000263102 KRTAP1-4P0C5Y4 121 aa7.74□□□□□ -1.17
CCDC6-201ENST00000263102 ATMQ13315 3056 aa7.73□□□□□ -1.17
CCDC6-201ENST00000263102 NBEAL2Q6ZNJ1 2754 aa7.71□□□□□ -1.18
CCDC6-201ENST00000263102 GCN1Q92616 2671 aaKnown RBP7.7□□□□□ -1.18
CCDC6-201ENST00000263102 ZNF292O60281 2723 aa7.7□□□□□ -1.18
CCDC6-201ENST00000263102 SPTBN5Q9NRC6 3674 aaKnown RBP7.69□□□□□ -1.18
CCDC6-201ENST00000263102 WDFY3Q8IZQ1 3526 aa7.67□□□□□ -1.18
CCDC6-201ENST00000263102 LOC400499M0QZD8 3231 aa7.64□□□□□ -1.19
CCDC6-201ENST00000263102 LRBAP50851 2863 aa7.63□□□□□ -1.19
CCDC6-201ENST00000263102 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
CCDC6-201ENST00000263102 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
CCDC6-201ENST00000263102 COL12A1Q99715 3063 aa7.61□□□□□ -1.19
CCDC6-201ENST00000263102 DCHS1Q96JQ0 3298 aa7.61□□□□□ -1.19
CCDC6-201ENST00000263102 ITPR1Q14643 2758 aa7.6□□□□□ -1.19
CCDC6-201ENST00000263102 H0YAA0 97 aa7.57□□□□□ -1.2
CCDC6-201ENST00000263102 UBR5O95071 2799 aaPredicted RBP7.54□□□□□ -1.2
CCDC6-201ENST00000263102 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.21
CCDC6-201ENST00000263102 IGSF10Q6WRI0 2623 aa7.52□□□□□ -1.21
CCDC6-201ENST00000263102 FLNCQ14315 2725 aa7.52□□□□□ -1.21
CCDC6-201ENST00000263102 DMXL1Q9Y485 3027 aa7.5□□□□□ -1.21
CCDC6-201ENST00000263102 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
CCDC6-201ENST00000263102 ASPMQ8IZT6 3477 aa7.49□□□□□ -1.21
CCDC6-201ENST00000263102 CRYBG3Q68DQ2 2970 aa7.48□□□□□ -1.21
CCDC6-201ENST00000263102 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
CCDC6-201ENST00000263102 NSD1Q96L73 2696 aaPredicted RBP7.41□□□□□ -1.22
CCDC6-201ENST00000263102 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
CCDC6-201ENST00000263102 UTP20O75691 2785 aaKnown RBP7.41□□□□□ -1.22
CCDC6-201ENST00000263102 ZANQ9Y493 2812 aa7.4□□□□□ -1.23
CCDC6-201ENST00000263102 ZFHX4Q86UP3 3567 aa7.38□□□□□ -1.23
CCDC6-201ENST00000263102 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
CCDC6-201ENST00000263102 TNRC18O15417 2968 aaPredicted RBP7.34□□□□□ -1.23
CCDC6-201ENST00000263102 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
CCDC6-201ENST00000263102 NF1P21359 2839 aa7.29□□□□□ -1.24
CCDC6-201ENST00000263102 RELNP78509 3460 aa7.28□□□□□ -1.24
CCDC6-201ENST00000263102 LAMA5O15230 3695 aa7.27□□□□□ -1.25
CCDC6-201ENST00000263102 HIVEP1P15822 2718 aa7.27□□□□□ -1.25
CCDC6-201ENST00000263102 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
CCDC6-201ENST00000263102 FBN2P35556 2912 aa7.26□□□□□ -1.25
CCDC6-201ENST00000263102 CUBNO60494 3623 aa7.24□□□□□ -1.25
CCDC6-201ENST00000263102 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
CCDC6-201ENST00000263102 KRTAP13-4Q3LI77 160 aa7.19□□□□□ -1.26
CCDC6-201ENST00000263102 DCHS2Q6V1P9 2916 aa7.18□□□□□ -1.26
CCDC6-201ENST00000263102 APCP25054 2843 aa7.17□□□□□ -1.26
CCDC6-201ENST00000263102 DMDP11532 3685 aa7.17□□□□□ -1.26
CCDC6-201ENST00000263102 CSMD1Q96PZ7 3565 aa7.16□□□□□ -1.26
CCDC6-201ENST00000263102 CELSR1Q9NYQ6 3014 aa7.13□□□□□ -1.27
CCDC6-201ENST00000263102 SMG1Q96Q15 3661 aaKnown RBP7.1□□□□□ -1.27
CCDC6-201ENST00000263102 HRNRQ86YZ3 2850 aaPredicted RBP7.09□□□□□ -1.27
CCDC6-201ENST00000263102 SVEP1Q4LDE5 3571 aa7.06□□□□□ -1.28
CCDC6-201ENST00000263102 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
CCDC6-201ENST00000263102 TENM2Q9NT68 2774 aa7.02□□□□□ -1.28
CCDC6-201ENST00000263102 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
CCDC6-201ENST00000263102 MXRA5Q9NR99 2828 aa6.99□□□□□ -1.29
CCDC6-201ENST00000263102 SPENQ96T58 3664 aaKnown RBP6.89□□□□□ -1.31
CCDC6-201ENST00000263102 TENM1Q9UKZ4 2725 aa6.88□□□□□ -1.31
CCDC6-201ENST00000263102 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
CCDC6-201ENST00000263102 PDZD2O15018 2839 aa6.77□□□□□ -1.33
CCDC6-201ENST00000263102 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
CCDC6-201ENST00000263102 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
CCDC6-201ENST00000263102 FBN1P35555 2871 aaKnown RBP6.71□□□□□ -1.34
CCDC6-201ENST00000263102 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
CCDC6-201ENST00000263102 TGP01266 2768 aa6.68□□□□□ -1.34
CCDC6-201ENST00000263102 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
CCDC6-201ENST00000263102 VWFP04275 2813 aa6.66□□□□□ -1.34
CCDC6-201ENST00000263102 PKD1L1Q8TDX9 2849 aa6.62□□□□□ -1.35
CCDC6-201ENST00000263102 CSMD2Q7Z408 3487 aa6.59□□□□□ -1.35
CCDC6-201ENST00000263102 KRTAP8-1Q8IUC2 63 aa6.58□□□□□ -1.36
CCDC6-201ENST00000263102 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
CCDC6-201ENST00000263102 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
CCDC6-201ENST00000263102 KRTAP10-5P60370 271 aa6.57□□□□□ -1.36
CCDC6-201ENST00000263102 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
CCDC6-201ENST00000263102 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
CCDC6-201ENST00000263102 INE1O15225 51 aa6.48□□□□□ -1.37
CCDC6-201ENST00000263102 ZFHX3Q15911 3703 aa6.46□□□□□ -1.38
CCDC6-201ENST00000263102 SRRM2Q9UQ35 2752 aaKnown RBP6.44□□□□□ -1.38
CCDC6-201ENST00000263102 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.38
CCDC6-201ENST00000263102 NBPF19A0A087WUL8 3843 aa6.38□□□□□ -1.39
CCDC6-201ENST00000263102 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
CCDC6-201ENST00000263102 FBN3Q75N90 2809 aa6.25□□□□□ -1.41
CCDC6-201ENST00000263102 KRTAP3-2Q9BYR7 98 aa6.24□□□□□ -1.41
CCDC6-201ENST00000263102 TRRAPQ9Y4A5 3859 aa6.2□□□□□ -1.42
CCDC6-201ENST00000263102 VPS13CQ709C8 3753 aa6.18□□□□□ -1.42
CCDC6-201ENST00000263102 BSNQ9UPA5 3926 aa6.17□□□□□ -1.42
CCDC6-201ENST00000263102 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
CCDC6-201ENST00000263102 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
CCDC6-201ENST00000263102 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
CCDC6-201ENST00000263102 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms