RNA–Protein interactions for RNA: ENST00000261427.9

UBE2K-201, Transcript of ubiquitin conjugating enzyme E2 K, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2K, Length 5,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2K-201ENST00000261427 COL12A1Q99715 3063 aa10.64□□□□□ -0.71
UBE2K-201ENST00000261427 DMXL2Q8TDJ6 3036 aa10.63□□□□□ -0.71
UBE2K-201ENST00000261427 XIRP2A4UGR9 3374 aa10.63□□□□□ -0.71
UBE2K-201ENST00000261427 LRBAP50851 2863 aa10.6□□□□□ -0.71
UBE2K-201ENST00000261427 ASH1LQ9NR48 2969 aaKnown RBP10.58□□□□□ -0.72
UBE2K-201ENST00000261427 PP632Q6XCG6 107 aa10.58□□□□□ -0.72
UBE2K-201ENST00000261427 NDUFAF8A1L188 74 aa10.55□□□□□ -0.72
UBE2K-201ENST00000261427 UNC80Q8N2C7 3258 aa10.53□□□□□ -0.72
UBE2K-201ENST00000261427 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
UBE2K-201ENST00000261427 FRYLO94915 3013 aa10.52□□□□□ -0.72
UBE2K-201ENST00000261427 CELSR2Q9HCU4 2923 aa10.51□□□□□ -0.73
UBE2K-201ENST00000261427 C10orf95Q9H7T3 257 aa10.5□□□□□ -0.73
UBE2K-201ENST00000261427 FREM2Q5SZK8 3169 aa10.49□□□□□ -0.73
UBE2K-201ENST00000261427 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
UBE2K-201ENST00000261427 CRYBG3Q68DQ2 2970 aa10.46□□□□□ -0.73
UBE2K-201ENST00000261427 ADGRG4Q8IZF6 3080 aa10.42□□□□□ -0.74
UBE2K-201ENST00000261427 LAMA1P25391 3075 aa10.41□□□□□ -0.74
UBE2K-201ENST00000261427 DCHS2Q6V1P9 2916 aa10.39□□□□□ -0.75
UBE2K-201ENST00000261427 ZZEF1O43149 2961 aa10.39□□□□□ -0.75
UBE2K-201ENST00000261427 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
UBE2K-201ENST00000261427 A0A1B0GVY2 172 aa10.37□□□□□ -0.75
UBE2K-201ENST00000261427 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
UBE2K-201ENST00000261427 CELSR3Q9NYQ7 3312 aa10.32□□□□□ -0.76
UBE2K-201ENST00000261427 H0YAA0 97 aa10.31□□□□□ -0.76
UBE2K-201ENST00000261427 KRTAP13-3Q3SY46 172 aa10.3□□□□□ -0.76
UBE2K-201ENST00000261427 KRTAP10-10P60014 251 aa10.27□□□□□ -0.77
UBE2K-201ENST00000261427 CDH23Q9H251 3354 aa10.26□□□□□ -0.77
UBE2K-201ENST00000261427 BOD1L1Q8NFC6 3051 aa10.26□□□□□ -0.77
UBE2K-201ENST00000261427 ZANQ9Y493 2812 aa10.25□□□□□ -0.77
UBE2K-201ENST00000261427 TENM1Q9UKZ4 2725 aa10.25□□□□□ -0.77
UBE2K-201ENST00000261427 PRO2289Q9P1D8 64 aa10.23□□□□□ -0.77
UBE2K-201ENST00000261427 EYSQ5T1H1 3165 aa10.23□□□□□ -0.77
UBE2K-201ENST00000261427 P0C880 135 aa10.2□□□□□ -0.78
UBE2K-201ENST00000261427 NF1P21359 2839 aa10.14□□□□□ -0.79
UBE2K-201ENST00000261427 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
UBE2K-201ENST00000261427 VCANP13611 3396 aa10.07□□□□□ -0.8
UBE2K-201ENST00000261427 SZT2Q5T011 3432 aa10.05□□□□□ -0.8
UBE2K-201ENST00000261427 COL6A3P12111 3177 aa10.01□□□□□ -0.81
UBE2K-201ENST00000261427 HRNRQ86YZ3 2850 aaPredicted RBP10□□□□□ -0.81
UBE2K-201ENST00000261427 CFAP47Q6ZTR5 3102 aa9.99□□□□□ -0.81
UBE2K-201ENST00000261427 FBN2P35556 2912 aa9.95□□□□□ -0.82
UBE2K-201ENST00000261427 TGP01266 2768 aa9.94□□□□□ -0.82
UBE2K-201ENST00000261427 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.82
UBE2K-201ENST00000261427 MXRA5Q9NR99 2828 aa9.85□□□□□ -0.83
UBE2K-201ENST00000261427 DNAH14Q0VDD8 3507 aa9.81□□□□□ -0.84
UBE2K-201ENST00000261427 CELSR1Q9NYQ6 3014 aa9.79□□□□□ -0.84
UBE2K-201ENST00000261427 PKD1L1Q8TDX9 2849 aa9.77□□□□□ -0.85
UBE2K-201ENST00000261427 DMXL1Q9Y485 3027 aa9.73□□□□□ -0.85
UBE2K-201ENST00000261427 USP34Q70CQ2 3546 aa9.73□□□□□ -0.85
UBE2K-201ENST00000261427 KRTAP12-2P59991 146 aa9.7□□□□□ -0.86
UBE2K-201ENST00000261427 PDZD2O15018 2839 aa9.69□□□□□ -0.86
UBE2K-201ENST00000261427 KRTAP13-4Q3LI77 160 aa9.67□□□□□ -0.86
UBE2K-201ENST00000261427 SPEGQ15772 3267 aa9.62□□□□□ -0.87
UBE2K-201ENST00000261427 VWFP04275 2813 aa9.6□□□□□ -0.87
UBE2K-201ENST00000261427 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
UBE2K-201ENST00000261427 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
UBE2K-201ENST00000261427 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.9
UBE2K-201ENST00000261427 SPTBN5Q9NRC6 3674 aaKnown RBP9.39□□□□□ -0.91
UBE2K-201ENST00000261427 KRTAP10-6P60371 365 aaPredicted RBP9.27□□□□□ -0.93
UBE2K-201ENST00000261427 MYO15AQ9UKN7 3530 aa9.27□□□□□ -0.93
UBE2K-201ENST00000261427 KRTAP15-1Q3LI76 137 aa9.27□□□□□ -0.93
UBE2K-201ENST00000261427 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
UBE2K-201ENST00000261427 DCHS1Q96JQ0 3298 aa9.21□□□□□ -0.93
UBE2K-201ENST00000261427 FBN1P35555 2871 aaKnown RBP9.17□□□□□ -0.94
UBE2K-201ENST00000261427 MT1HL1P0DM35 61 aa9.15□□□□□ -0.94
UBE2K-201ENST00000261427 OTOGQ6ZRI0 2925 aa9.12□□□□□ -0.95
UBE2K-201ENST00000261427 FBN3Q75N90 2809 aa9.09□□□□□ -0.95
UBE2K-201ENST00000261427 WDFY3Q8IZQ1 3526 aa9.06□□□□□ -0.96
UBE2K-201ENST00000261427 RELNP78509 3460 aa9.02□□□□□ -0.96
UBE2K-201ENST00000261427 MEGF8Q7Z7M0 2845 aa8.99□□□□□ -0.97
UBE2K-201ENST00000261427 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
UBE2K-201ENST00000261427 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
UBE2K-201ENST00000261427 KRTAP10-12P60413 245 aa8.88□□□□□ -0.99
UBE2K-201ENST00000261427 COL7A1Q02388 2944 aa8.88□□□□□ -0.99
UBE2K-201ENST00000261427 NBPF19A0A087WUL8 3843 aa8.85□□□□□ -0.99
UBE2K-201ENST00000261427 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
UBE2K-201ENST00000261427 ANK3Q12955 4377 aaKnown RBP8.76□□□□□ -1.01
UBE2K-201ENST00000261427 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
UBE2K-201ENST00000261427 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
UBE2K-201ENST00000261427 INE1O15225 51 aa8.75□□□□□ -1.01
UBE2K-201ENST00000261427 KRTAP4-5Q9BYR2 181 aa8.71□□□□□ -1.01
UBE2K-201ENST00000261427 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.02
UBE2K-201ENST00000261427 KRTAP12-3P60328 96 aa8.64□□□□□ -1.03
UBE2K-201ENST00000261427 LAMA5O15230 3695 aa8.61□□□□□ -1.03
UBE2K-201ENST00000261427 CRCT1Q9UGL9 99 aa8.6□□□□□ -1.03
UBE2K-201ENST00000261427 ASPMQ8IZT6 3477 aa8.58□□□□□ -1.04
UBE2K-201ENST00000261427 LCE3AQ5TA76 89 aa8.45□□□□□ -1.06
UBE2K-201ENST00000261427 MUC3AQ02505 3323 aa8.42□□□□□ -1.06
UBE2K-201ENST00000261427 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.06
UBE2K-201ENST00000261427 CSMD1Q96PZ7 3565 aa8.38□□□□□ -1.07
UBE2K-201ENST00000261427 DMDP11532 3685 aa8.37□□□□□ -1.07
UBE2K-201ENST00000261427 HUWE1Q7Z6Z7 4374 aaKnown RBP8.35□□□□□ -1.07
UBE2K-201ENST00000261427 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
UBE2K-201ENST00000261427 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
UBE2K-201ENST00000261427 SMG1Q96Q15 3661 aaKnown RBP8.28□□□□□ -1.08
UBE2K-201ENST00000261427 CSMD2Q7Z408 3487 aa8.25□□□□□ -1.09
UBE2K-201ENST00000261427 KRTAP8-1Q8IUC2 63 aa8.23□□□□□ -1.09
UBE2K-201ENST00000261427 SVEP1Q4LDE5 3571 aa8.13□□□□□ -1.11
UBE2K-201ENST00000261427 CUBNO60494 3623 aa8.11□□□□□ -1.11
UBE2K-201ENST00000261427 DNAH5Q8TE73 4624 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms