RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 CFAP47Q6ZTR5 3102 aa8.49□□□□□ -1.05
C12orf49-201ENST00000261318 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
C12orf49-201ENST00000261318 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
C12orf49-201ENST00000261318 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
C12orf49-201ENST00000261318 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
C12orf49-201ENST00000261318 USP34Q70CQ2 3546 aa8.47□□□□□ -1.05
C12orf49-201ENST00000261318 ATMQ13315 3056 aa8.46□□□□□ -1.05
C12orf49-201ENST00000261318 HIVEP1P15822 2718 aa8.46□□□□□ -1.06
C12orf49-201ENST00000261318 FLNCQ14315 2725 aa8.45□□□□□ -1.06
C12orf49-201ENST00000261318 ZZEF1O43149 2961 aa8.41□□□□□ -1.06
C12orf49-201ENST00000261318 CELSR2Q9HCU4 2923 aa8.4□□□□□ -1.06
C12orf49-201ENST00000261318 SPEGQ15772 3267 aa8.39□□□□□ -1.07
C12orf49-201ENST00000261318 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
C12orf49-201ENST00000261318 A8MUU9 505 aa8.39□□□□□ -1.07
C12orf49-201ENST00000261318 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
C12orf49-201ENST00000261318 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
C12orf49-201ENST00000261318 CRYBG3Q68DQ2 2970 aa8.36□□□□□ -1.07
C12orf49-201ENST00000261318 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
C12orf49-201ENST00000261318 SPTBN5Q9NRC6 3674 aaKnown RBP8.32□□□□□ -1.08
C12orf49-201ENST00000261318 TNRC18O15417 2968 aaPredicted RBP8.31□□□□□ -1.08
C12orf49-201ENST00000261318 C20orf166-AS1Q96NR2 134 aa8.3□□□□□ -1.08
C12orf49-201ENST00000261318 DMXL1Q9Y485 3027 aa8.3□□□□□ -1.08
C12orf49-201ENST00000261318 NIPBLQ6KC79 2804 aaeCLIP8.25□□□□□ -1.09
C12orf49-201ENST00000261318 DCHS2Q6V1P9 2916 aa8.22□□□□□ -1.09
C12orf49-201ENST00000261318 EYSQ5T1H1 3165 aa8.22□□□□□ -1.09
C12orf49-201ENST00000261318 ZANQ9Y493 2812 aa8.21□□□□□ -1.1
C12orf49-201ENST00000261318 FBN2P35556 2912 aa8.14□□□□□ -1.11
C12orf49-201ENST00000261318 TNP1P09430 55 aa8.13□□□□□ -1.11
C12orf49-201ENST00000261318 HRNRQ86YZ3 2850 aaPredicted RBP8.12□□□□□ -1.11
C12orf49-201ENST00000261318 MYO15AQ9UKN7 3530 aa8.11□□□□□ -1.11
C12orf49-201ENST00000261318 LOC400499M0QZD8 3231 aa8.11□□□□□ -1.11
C12orf49-201ENST00000261318 WDFY3Q8IZQ1 3526 aa8.1□□□□□ -1.11
C12orf49-201ENST00000261318 C10orf95Q9H7T3 257 aa8.09□□□□□ -1.11
C12orf49-201ENST00000261318 NF1P21359 2839 aa8.07□□□□□ -1.12
C12orf49-201ENST00000261318 H0YAA0 97 aa8.03□□□□□ -1.12
C12orf49-201ENST00000261318 CELSR1Q9NYQ6 3014 aa8.02□□□□□ -1.13
C12orf49-201ENST00000261318 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.13
C12orf49-201ENST00000261318 PP632Q6XCG6 107 aa8.01□□□□□ -1.13
C12orf49-201ENST00000261318 TGP01266 2768 aa7.97□□□□□ -1.13
C12orf49-201ENST00000261318 TENM4Q6N022 2769 aa7.93□□□□□ -1.14
C12orf49-201ENST00000261318 KRTAP1-4P0C5Y4 121 aa7.89□□□□□ -1.15
C12orf49-201ENST00000261318 P0C880 135 aa7.88□□□□□ -1.15
C12orf49-201ENST00000261318 XP32Q5T750 250 aa7.86□□□□□ -1.15
C12orf49-201ENST00000261318 DCHS1Q96JQ0 3298 aa7.84□□□□□ -1.15
C12orf49-201ENST00000261318 TENM3Q9P273 2699 aa7.84□□□□□ -1.15
C12orf49-201ENST00000261318 ASPMQ8IZT6 3477 aa7.83□□□□□ -1.16
C12orf49-201ENST00000261318 MXRA5Q9NR99 2828 aa7.82□□□□□ -1.16
C12orf49-201ENST00000261318 PDZD2O15018 2839 aa7.82□□□□□ -1.16
C12orf49-201ENST00000261318 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
C12orf49-201ENST00000261318 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
C12orf49-201ENST00000261318 LAMA5O15230 3695 aa7.74□□□□□ -1.17
C12orf49-201ENST00000261318 ZFHX4Q86UP3 3567 aa7.7□□□□□ -1.18
C12orf49-201ENST00000261318 RELNP78509 3460 aa7.7□□□□□ -1.18
C12orf49-201ENST00000261318 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
C12orf49-201ENST00000261318 A0A1B0GVY2 172 aa7.66□□□□□ -1.18
C12orf49-201ENST00000261318 NBPF19A0A087WUL8 3843 aa7.65□□□□□ -1.18
C12orf49-201ENST00000261318 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
C12orf49-201ENST00000261318 PKD1L1Q8TDX9 2849 aa7.61□□□□□ -1.19
C12orf49-201ENST00000261318 KRTAP21-3Q3LHN1 58 aa7.6□□□□□ -1.19
C12orf49-201ENST00000261318 VWFP04275 2813 aa7.6□□□□□ -1.19
C12orf49-201ENST00000261318 SMG1Q96Q15 3661 aaKnown RBP7.53□□□□□ -1.2
C12orf49-201ENST00000261318 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
C12orf49-201ENST00000261318 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
C12orf49-201ENST00000261318 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
C12orf49-201ENST00000261318 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
C12orf49-201ENST00000261318 SPENQ96T58 3664 aaKnown RBP7.4□□□□□ -1.22
C12orf49-201ENST00000261318 DMDP11532 3685 aa7.4□□□□□ -1.22
C12orf49-201ENST00000261318 SVEP1Q4LDE5 3571 aa7.38□□□□□ -1.23
C12orf49-201ENST00000261318 KRTAP13-4Q3LI77 160 aa7.35□□□□□ -1.23
C12orf49-201ENST00000261318 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
C12orf49-201ENST00000261318 CUBNO60494 3623 aa7.32□□□□□ -1.24
C12orf49-201ENST00000261318 ZFHX3Q15911 3703 aa7.31□□□□□ -1.24
C12orf49-201ENST00000261318 FBN1P35555 2871 aaKnown RBP7.3□□□□□ -1.24
C12orf49-201ENST00000261318 SRRM2Q9UQ35 2752 aaKnown RBP7.29□□□□□ -1.24
C12orf49-201ENST00000261318 MEGF8Q7Z7M0 2845 aa7.27□□□□□ -1.25
C12orf49-201ENST00000261318 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
C12orf49-201ENST00000261318 FBN3Q75N90 2809 aa7.24□□□□□ -1.25
C12orf49-201ENST00000261318 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
C12orf49-201ENST00000261318 TRRAPQ9Y4A5 3859 aa7.13□□□□□ -1.27
C12orf49-201ENST00000261318 KRTAP10-6P60371 365 aaPredicted RBP7.07□□□□□ -1.28
C12orf49-201ENST00000261318 VPS13CQ709C8 3753 aa7.07□□□□□ -1.28
C12orf49-201ENST00000261318 MUC3AQ02505 3323 aa7.06□□□□□ -1.28
C12orf49-201ENST00000261318 OTOGQ6ZRI0 2925 aa7.03□□□□□ -1.28
C12orf49-201ENST00000261318 BSNQ9UPA5 3926 aa7□□□□□ -1.29
C12orf49-201ENST00000261318 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
C12orf49-201ENST00000261318 CSMD2Q7Z408 3487 aa6.97□□□□□ -1.29
C12orf49-201ENST00000261318 INE1O15225 51 aa6.85□□□□□ -1.31
C12orf49-201ENST00000261318 ANK3Q12955 4377 aaKnown RBP6.84□□□□□ -1.32
C12orf49-201ENST00000261318 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
C12orf49-201ENST00000261318 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
C12orf49-201ENST00000261318 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
C12orf49-201ENST00000261318 AKAP9Q99996 3911 aa6.71□□□□□ -1.34
C12orf49-201ENST00000261318 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
C12orf49-201ENST00000261318 HUWE1Q7Z6Z7 4374 aaKnown RBP6.59□□□□□ -1.35
C12orf49-201ENST00000261318 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
C12orf49-201ENST00000261318 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
C12orf49-201ENST00000261318 ZNF469Q96JG9 3925 aaPredicted RBP6.5□□□□□ -1.37
C12orf49-201ENST00000261318 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
C12orf49-201ENST00000261318 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
C12orf49-201ENST00000261318 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms