RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 STAB1Q9NY15 2570 aa9.54□□□□□ -0.88
SORT1-201ENST00000256637 RELNP78509 3460 aa9.52□□□□□ -0.89
SORT1-201ENST00000256637 Q75L30 129 aa9.49□□□□□ -0.89
SORT1-201ENST00000256637 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
SORT1-201ENST00000256637 TACC2O95359 2948 aa9.49□□□□□ -0.89
SORT1-201ENST00000256637 UTP20O75691 2785 aaKnown RBP9.49□□□□□ -0.89
SORT1-201ENST00000256637 GCN1Q92616 2671 aaKnown RBP9.48□□□□□ -0.89
SORT1-201ENST00000256637 CSMD1Q96PZ7 3565 aa9.47□□□□□ -0.89
SORT1-201ENST00000256637 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
SORT1-201ENST00000256637 A8MU10 97 aa9.45□□□□□ -0.9
SORT1-201ENST00000256637 LINC01558Q9Y6Z2 57 aa9.45□□□□□ -0.9
SORT1-201ENST00000256637 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
SORT1-201ENST00000256637 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
SORT1-201ENST00000256637 KRTAP10-8P60410 259 aa9.43□□□□□ -0.9
SORT1-201ENST00000256637 Q5VV11 94 aa9.36□□□□□ -0.91
SORT1-201ENST00000256637 NBEAQ8NFP9 2946 aa9.35□□□□□ -0.91
SORT1-201ENST00000256637 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
SORT1-201ENST00000256637 KRTAP10-10P60014 251 aa9.33□□□□□ -0.92
SORT1-201ENST00000256637 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
SORT1-201ENST00000256637 SPENQ96T58 3664 aaKnown RBP9.29□□□□□ -0.92
SORT1-201ENST00000256637 APCP25054 2843 aa9.28□□□□□ -0.92
SORT1-201ENST00000256637 NOTCH1P46531 2555 aa9.27□□□□□ -0.93
SORT1-201ENST00000256637 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
SORT1-201ENST00000256637 RPS29P62273 56 aaKnown RBP9.24□□□□□ -0.93
SORT1-201ENST00000256637 TNP1P09430 55 aa9.23□□□□□ -0.93
SORT1-201ENST00000256637 HIVEP1P15822 2718 aa9.23□□□□□ -0.93
SORT1-201ENST00000256637 UBR5O95071 2799 aaPredicted RBP9.19□□□□□ -0.94
SORT1-201ENST00000256637 XP32Q5T750 250 aa9.19□□□□□ -0.94
SORT1-201ENST00000256637 NSD1Q96L73 2696 aaPredicted RBP9.19□□□□□ -0.94
SORT1-201ENST00000256637 H3BS24 57 aa9.18□□□□□ -0.94
SORT1-201ENST00000256637 ITPR1Q14643 2758 aa9.17□□□□□ -0.94
SORT1-201ENST00000256637 KRTAP29-1A8MX34 341 aaPredicted RBP9.15□□□□□ -0.94
SORT1-201ENST00000256637 KRTAP13-1Q8IUC0 172 aa9.13□□□□□ -0.95
SORT1-201ENST00000256637 SMG1Q96Q15 3661 aaKnown RBP9.13□□□□□ -0.95
SORT1-201ENST00000256637 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
SORT1-201ENST00000256637 Q5XG85 94 aa9.1□□□□□ -0.95
SORT1-201ENST00000256637 STAB2Q8WWQ8 2551 aa9.1□□□□□ -0.95
SORT1-201ENST00000256637 ZFHX3Q15911 3703 aa9.09□□□□□ -0.95
SORT1-201ENST00000256637 TENM4Q6N022 2769 aa9.06□□□□□ -0.96
SORT1-201ENST00000256637 SVEP1Q4LDE5 3571 aa9.03□□□□□ -0.96
SORT1-201ENST00000256637 P0C880 135 aa9.03□□□□□ -0.96
SORT1-201ENST00000256637 CELSR2Q9HCU4 2923 aa8.98□□□□□ -0.97
SORT1-201ENST00000256637 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
SORT1-201ENST00000256637 CELSR1Q9NYQ6 3014 aa8.96□□□□□ -0.97
SORT1-201ENST00000256637 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
SORT1-201ENST00000256637 CSMD2Q7Z408 3487 aa8.92□□□□□ -0.98
SORT1-201ENST00000256637 TPRXLQ17RH7 258 aa8.9□□□□□ -0.98
SORT1-201ENST00000256637 MUC3AQ02505 3323 aa8.89□□□□□ -0.99
SORT1-201ENST00000256637 DCHS2Q6V1P9 2916 aa8.84□□□□□ -0.99
SORT1-201ENST00000256637 BSNQ9UPA5 3926 aa8.84□□□□□ -0.99
SORT1-201ENST00000256637 TENM2Q9NT68 2774 aa8.82□□□□□ -1
SORT1-201ENST00000256637 FLNCQ14315 2725 aa8.81□□□□□ -1
SORT1-201ENST00000256637 CUBNO60494 3623 aa8.81□□□□□ -1
SORT1-201ENST00000256637 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
SORT1-201ENST00000256637 HRNRQ86YZ3 2850 aaPredicted RBP8.78□□□□□ -1
SORT1-201ENST00000256637 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1
SORT1-201ENST00000256637 NDUFAF8A1L188 74 aa8.77□□□□□ -1.01
SORT1-201ENST00000256637 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
SORT1-201ENST00000256637 FBN2P35556 2912 aa8.73□□□□□ -1.01
SORT1-201ENST00000256637 TENM1Q9UKZ4 2725 aa8.71□□□□□ -1.01
SORT1-201ENST00000256637 ANK3Q12955 4377 aaKnown RBP8.67□□□□□ -1.02
SORT1-201ENST00000256637 NF1P21359 2839 aa8.67□□□□□ -1.02
SORT1-201ENST00000256637 NIPBLQ6KC79 2804 aaeCLIP8.66□□□□□ -1.02
SORT1-201ENST00000256637 VPS13CQ709C8 3753 aa8.62□□□□□ -1.03
SORT1-201ENST00000256637 ZANQ9Y493 2812 aa8.61□□□□□ -1.03
SORT1-201ENST00000256637 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
SORT1-201ENST00000256637 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
SORT1-201ENST00000256637 CRCT1Q9UGL9 99 aa8.46□□□□□ -1.05
SORT1-201ENST00000256637 VWFP04275 2813 aa8.45□□□□□ -1.06
SORT1-201ENST00000256637 H0YAA0 97 aa8.43□□□□□ -1.06
SORT1-201ENST00000256637 AKAP9Q99996 3911 aa8.4□□□□□ -1.07
SORT1-201ENST00000256637 A6NN06 94 aa8.4□□□□□ -1.07
SORT1-201ENST00000256637 PP632Q6XCG6 107 aa8.38□□□□□ -1.07
SORT1-201ENST00000256637 KRTAP4-5Q9BYR2 181 aa8.36□□□□□ -1.07
SORT1-201ENST00000256637 MXRA5Q9NR99 2828 aa8.32□□□□□ -1.08
SORT1-201ENST00000256637 HUWE1Q7Z6Z7 4374 aaKnown RBP8.32□□□□□ -1.08
SORT1-201ENST00000256637 CSMD3Q7Z407 3707 aa8.3□□□□□ -1.08
SORT1-201ENST00000256637 PDZD2O15018 2839 aa8.25□□□□□ -1.09
SORT1-201ENST00000256637 TENM3Q9P273 2699 aa8.23□□□□□ -1.09
SORT1-201ENST00000256637 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
SORT1-201ENST00000256637 FBN1P35555 2871 aaKnown RBP8.21□□□□□ -1.1
SORT1-201ENST00000256637 ZNF469Q96JG9 3925 aaPredicted RBP8.17□□□□□ -1.1
SORT1-201ENST00000256637 TGP01266 2768 aa8.11□□□□□ -1.11
SORT1-201ENST00000256637 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.12
SORT1-201ENST00000256637 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
SORT1-201ENST00000256637 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.14
SORT1-201ENST00000256637 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
SORT1-201ENST00000256637 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
SORT1-201ENST00000256637 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
SORT1-201ENST00000256637 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
SORT1-201ENST00000256637 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
SORT1-201ENST00000256637 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
SORT1-201ENST00000256637 MEGF8Q7Z7M0 2845 aa7.78□□□□□ -1.16
SORT1-201ENST00000256637 FBN3Q75N90 2809 aa7.65□□□□□ -1.18
SORT1-201ENST00000256637 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
SORT1-201ENST00000256637 DNAH9Q9NYC9 4486 aa7.64□□□□□ -1.19
SORT1-201ENST00000256637 SRRM2Q9UQ35 2752 aaKnown RBP7.54□□□□□ -1.2
SORT1-201ENST00000256637 CMYA5Q8N3K9 4069 aa7.52□□□□□ -1.21
SORT1-201ENST00000256637 FRAS1Q86XX4 4008 aa7.5□□□□□ -1.21
SORT1-201ENST00000256637 KMT2AQ03164 3969 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms