RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 ASH1LQ9NR48 2969 aaKnown RBP4.64□□□□□ -1.67
YIPF4-201ENST00000238831 KRTAP13-1Q8IUC0 172 aa4.64□□□□□ -1.67
YIPF4-201ENST00000238831 XP32Q5T750 250 aa4.63□□□□□ -1.67
YIPF4-201ENST00000238831 HIVEP1P15822 2718 aa4.62□□□□□ -1.67
YIPF4-201ENST00000238831 BRCA2P51587 3418 aa4.61□□□□□ -1.67
YIPF4-201ENST00000238831 LRBAP50851 2863 aa4.6□□□□□ -1.67
YIPF4-201ENST00000238831 ITPR1Q14643 2758 aa4.6□□□□□ -1.67
YIPF4-201ENST00000238831 CFAP47Q6ZTR5 3102 aa4.6□□□□□ -1.67
YIPF4-201ENST00000238831 COL12A1Q99715 3063 aa4.59□□□□□ -1.68
YIPF4-201ENST00000238831 DNAH14Q0VDD8 3507 aa4.58□□□□□ -1.68
YIPF4-201ENST00000238831 CHD9Q3L8U1 2897 aa4.58□□□□□ -1.68
YIPF4-201ENST00000238831 VCANP13611 3396 aa4.56□□□□□ -1.68
YIPF4-201ENST00000238831 SPEGQ15772 3267 aa4.56□□□□□ -1.68
YIPF4-201ENST00000238831 FRYLO94915 3013 aa4.56□□□□□ -1.68
YIPF4-201ENST00000238831 HTTP42858 3142 aa4.56□□□□□ -1.68
YIPF4-201ENST00000238831 COL6A3P12111 3177 aa4.55□□□□□ -1.68
YIPF4-201ENST00000238831 TENM1Q9UKZ4 2725 aa4.55□□□□□ -1.68
YIPF4-201ENST00000238831 FLNCQ14315 2725 aa4.54□□□□□ -1.68
YIPF4-201ENST00000238831 LAMA1P25391 3075 aa4.53□□□□□ -1.68
YIPF4-201ENST00000238831 TACC2O95359 2948 aa4.52□□□□□ -1.69
YIPF4-201ENST00000238831 H0YAA0 97 aa4.52□□□□□ -1.69
YIPF4-201ENST00000238831 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
YIPF4-201ENST00000238831 KRTAP21-3Q3LHN1 58 aa4.52□□□□□ -1.69
YIPF4-201ENST00000238831 CDH23Q9H251 3354 aa4.51□□□□□ -1.69
YIPF4-201ENST00000238831 NIPBLQ6KC79 2804 aaeCLIP4.51□□□□□ -1.69
YIPF4-201ENST00000238831 CELSR2Q9HCU4 2923 aa4.48□□□□□ -1.69
YIPF4-201ENST00000238831 BOD1L1Q8NFC6 3051 aa4.47□□□□□ -1.69
YIPF4-201ENST00000238831 ATMQ13315 3056 aa4.47□□□□□ -1.69
YIPF4-201ENST00000238831 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.7
YIPF4-201ENST00000238831 USP34Q70CQ2 3546 aa4.45□□□□□ -1.7
YIPF4-201ENST00000238831 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
YIPF4-201ENST00000238831 ZZEF1O43149 2961 aa4.44□□□□□ -1.7
YIPF4-201ENST00000238831 TENM4Q6N022 2769 aa4.43□□□□□ -1.7
YIPF4-201ENST00000238831 TENM3Q9P273 2699 aa4.43□□□□□ -1.7
YIPF4-201ENST00000238831 SZT2Q5T011 3432 aa4.43□□□□□ -1.7
YIPF4-201ENST00000238831 NF1P21359 2839 aa4.42□□□□□ -1.7
YIPF4-201ENST00000238831 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.7
YIPF4-201ENST00000238831 ADGRG4Q8IZF6 3080 aa4.39□□□□□ -1.71
YIPF4-201ENST00000238831 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
YIPF4-201ENST00000238831 DCHS2Q6V1P9 2916 aa4.36□□□□□ -1.71
YIPF4-201ENST00000238831 INE1O15225 51 aa4.35□□□□□ -1.71
YIPF4-201ENST00000238831 TNRC18O15417 2968 aaPredicted RBP4.35□□□□□ -1.71
YIPF4-201ENST00000238831 TGP01266 2768 aa4.35□□□□□ -1.71
YIPF4-201ENST00000238831 CELSR1Q9NYQ6 3014 aa4.34□□□□□ -1.71
YIPF4-201ENST00000238831 PDZD2O15018 2839 aa4.32□□□□□ -1.72
YIPF4-201ENST00000238831 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
YIPF4-201ENST00000238831 NBEAQ8NFP9 2946 aa4.3□□□□□ -1.72
YIPF4-201ENST00000238831 ZFHX4Q86UP3 3567 aa4.3□□□□□ -1.72
YIPF4-201ENST00000238831 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
YIPF4-201ENST00000238831 NBPF19A0A087WUL8 3843 aa4.28□□□□□ -1.72
YIPF4-201ENST00000238831 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
YIPF4-201ENST00000238831 DMXL1Q9Y485 3027 aa4.26□□□□□ -1.73
YIPF4-201ENST00000238831 PKD1L1Q8TDX9 2849 aa4.26□□□□□ -1.73
YIPF4-201ENST00000238831 VWFP04275 2813 aa4.26□□□□□ -1.73
YIPF4-201ENST00000238831 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
YIPF4-201ENST00000238831 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
YIPF4-201ENST00000238831 EYSQ5T1H1 3165 aa4.24□□□□□ -1.73
YIPF4-201ENST00000238831 ASPMQ8IZT6 3477 aa4.24□□□□□ -1.73
YIPF4-201ENST00000238831 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
YIPF4-201ENST00000238831 SPTBN5Q9NRC6 3674 aaKnown RBP4.22□□□□□ -1.73
YIPF4-201ENST00000238831 LOC400499M0QZD8 3231 aa4.22□□□□□ -1.73
YIPF4-201ENST00000238831 FBN2P35556 2912 aa4.2□□□□□ -1.74
YIPF4-201ENST00000238831 WDFY3Q8IZQ1 3526 aa4.16□□□□□ -1.74
YIPF4-201ENST00000238831 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
YIPF4-201ENST00000238831 MT3P25713 68 aa4.14□□□□□ -1.75
YIPF4-201ENST00000238831 MYO15AQ9UKN7 3530 aa4.12□□□□□ -1.75
YIPF4-201ENST00000238831 HRNRQ86YZ3 2850 aaPredicted RBP4.1□□□□□ -1.75
YIPF4-201ENST00000238831 DCHS1Q96JQ0 3298 aa4.07□□□□□ -1.76
YIPF4-201ENST00000238831 MXRA5Q9NR99 2828 aa4.06□□□□□ -1.76
YIPF4-201ENST00000238831 LAMA5O15230 3695 aa4.05□□□□□ -1.76
YIPF4-201ENST00000238831 ZFHX3Q15911 3703 aa4.02□□□□□ -1.77
YIPF4-201ENST00000238831 KRTAP10-12P60413 245 aa4□□□□□ -1.77
YIPF4-201ENST00000238831 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
YIPF4-201ENST00000238831 COL7A1Q02388 2944 aa3.99□□□□□ -1.77
YIPF4-201ENST00000238831 CSMD1Q96PZ7 3565 aa3.99□□□□□ -1.77
YIPF4-201ENST00000238831 KRTAP3-1Q9BYR8 98 aa3.96□□□□□ -1.78
YIPF4-201ENST00000238831 MEGF8Q7Z7M0 2845 aa3.95□□□□□ -1.78
YIPF4-201ENST00000238831 RELNP78509 3460 aa3.93□□□□□ -1.78
YIPF4-201ENST00000238831 SPENQ96T58 3664 aaKnown RBP3.92□□□□□ -1.78
YIPF4-201ENST00000238831 SMG1Q96Q15 3661 aaKnown RBP3.91□□□□□ -1.78
YIPF4-201ENST00000238831 DMDP11532 3685 aa3.88□□□□□ -1.79
YIPF4-201ENST00000238831 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
YIPF4-201ENST00000238831 FBN3Q75N90 2809 aa3.86□□□□□ -1.79
YIPF4-201ENST00000238831 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
YIPF4-201ENST00000238831 KRTAP12-3P60328 96 aa3.84□□□□□ -1.8
YIPF4-201ENST00000238831 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
YIPF4-201ENST00000238831 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
YIPF4-201ENST00000238831 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
YIPF4-201ENST00000238831 FBN1P35555 2871 aaKnown RBP3.76□□□□□ -1.81
YIPF4-201ENST00000238831 MUC3AQ02505 3323 aa3.76□□□□□ -1.81
YIPF4-201ENST00000238831 CUBNO60494 3623 aa3.76□□□□□ -1.81
YIPF4-201ENST00000238831 MT1HL1P0DM35 61 aa3.74□□□□□ -1.81
YIPF4-201ENST00000238831 TRRAPQ9Y4A5 3859 aa3.74□□□□□ -1.81
YIPF4-201ENST00000238831 KRTAP4-5Q9BYR2 181 aa3.74□□□□□ -1.81
YIPF4-201ENST00000238831 SVEP1Q4LDE5 3571 aa3.69□□□□□ -1.82
YIPF4-201ENST00000238831 KRTAP3-3Q9BYR6 98 aa3.68□□□□□ -1.82
YIPF4-201ENST00000238831 KRTAP3-2Q9BYR7 98 aa3.68□□□□□ -1.82
YIPF4-201ENST00000238831 CSMD3Q7Z407 3707 aa3.67□□□□□ -1.82
YIPF4-201ENST00000238831 VPS13CQ709C8 3753 aa3.66□□□□□ -1.82
YIPF4-201ENST00000238831 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 1099.9 ms