RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
STAG1-201ENST00000236698 SMR3BP02814 79 aaPredicted RBP4□□□□□ -1.77
STAG1-201ENST00000236698 LINC00472Q9H8W2 130 aa4□□□□□ -1.77
STAG1-201ENST00000236698 FREM2Q5SZK8 3169 aa3.99□□□□□ -1.77
STAG1-201ENST00000236698 LRBAP50851 2863 aa3.99□□□□□ -1.77
STAG1-201ENST00000236698 BOD1L1Q8NFC6 3051 aa3.99□□□□□ -1.77
STAG1-201ENST00000236698 TENM4Q6N022 2769 aa3.98□□□□□ -1.77
STAG1-201ENST00000236698 CELSR2Q9HCU4 2923 aa3.97□□□□□ -1.77
STAG1-201ENST00000236698 MXRA5Q9NR99 2828 aa3.97□□□□□ -1.77
STAG1-201ENST00000236698 ANAPC11Q9NYG5 84 aa3.97□□□□□ -1.77
STAG1-201ENST00000236698 XIRP2A4UGR9 3374 aa3.96□□□□□ -1.78
STAG1-201ENST00000236698 Q5VSD8 79 aa3.96□□□□□ -1.78
STAG1-201ENST00000236698 KRTAP21-3Q3LHN1 58 aa3.95□□□□□ -1.78
STAG1-201ENST00000236698 KRTAP1-5Q9BYS1 174 aa3.95□□□□□ -1.78
STAG1-201ENST00000236698 RPS29P62273 56 aaKnown RBP3.95□□□□□ -1.78
STAG1-201ENST00000236698 DCHS2Q6V1P9 2916 aa3.94□□□□□ -1.78
STAG1-201ENST00000236698 EYSQ5T1H1 3165 aa3.93□□□□□ -1.78
STAG1-201ENST00000236698 KRTAP29-1A8MX34 341 aaPredicted RBP3.92□□□□□ -1.78
STAG1-201ENST00000236698 CDH23Q9H251 3354 aa3.92□□□□□ -1.78
STAG1-201ENST00000236698 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
STAG1-201ENST00000236698 Q6ZRN7 208 aaPredicted RBP3.91□□□□□ -1.78
STAG1-201ENST00000236698 SZT2Q5T011 3432 aa3.9□□□□□ -1.78
STAG1-201ENST00000236698 DMXL1Q9Y485 3027 aa3.9□□□□□ -1.78
STAG1-201ENST00000236698 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
STAG1-201ENST00000236698 FBN2P35556 2912 aa3.88□□□□□ -1.79
STAG1-201ENST00000236698 KRTAP13-1Q8IUC0 172 aa3.88□□□□□ -1.79
STAG1-201ENST00000236698 TENM3Q9P273 2699 aa3.88□□□□□ -1.79
STAG1-201ENST00000236698 REV3LO60673 3130 aa3.87□□□□□ -1.79
STAG1-201ENST00000236698 CRYBG3Q68DQ2 2970 aa3.86□□□□□ -1.79
STAG1-201ENST00000236698 ASH1LQ9NR48 2969 aaKnown RBP3.86□□□□□ -1.79
STAG1-201ENST00000236698 VCANP13611 3396 aa3.85□□□□□ -1.79
STAG1-201ENST00000236698 KRTAP7-1Q8IUC3 87 aa3.84□□□□□ -1.79
STAG1-201ENST00000236698 COL6A3P12111 3177 aa3.83□□□□□ -1.8
STAG1-201ENST00000236698 TPRXLQ17RH7 258 aa3.82□□□□□ -1.8
STAG1-201ENST00000236698 INE1O15225 51 aa3.81□□□□□ -1.8
STAG1-201ENST00000236698 CFAP47Q6ZTR5 3102 aa3.79□□□□□ -1.8
STAG1-201ENST00000236698 PDZD2O15018 2839 aa3.78□□□□□ -1.8
STAG1-201ENST00000236698 CELSR3Q9NYQ7 3312 aa3.77□□□□□ -1.81
STAG1-201ENST00000236698 TENM1Q9UKZ4 2725 aa3.77□□□□□ -1.81
STAG1-201ENST00000236698 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
STAG1-201ENST00000236698 LOC400499M0QZD8 3231 aa3.76□□□□□ -1.81
STAG1-201ENST00000236698 KRTAP10-2P60368 255 aa3.73□□□□□ -1.81
STAG1-201ENST00000236698 VWFP04275 2813 aa3.71□□□□□ -1.81
STAG1-201ENST00000236698 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.82
STAG1-201ENST00000236698 KRTAP10-8P60410 259 aa3.67□□□□□ -1.82
STAG1-201ENST00000236698 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
STAG1-201ENST00000236698 CELSR1Q9NYQ6 3014 aa3.67□□□□□ -1.82
STAG1-201ENST00000236698 TGP01266 2768 aa3.66□□□□□ -1.82
STAG1-201ENST00000236698 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
STAG1-201ENST00000236698 USP34Q70CQ2 3546 aa3.62□□□□□ -1.83
STAG1-201ENST00000236698 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
STAG1-201ENST00000236698 DNAH14Q0VDD8 3507 aa3.61□□□□□ -1.83
STAG1-201ENST00000236698 H0YAA0 97 aa3.61□□□□□ -1.83
STAG1-201ENST00000236698 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
STAG1-201ENST00000236698 TENM2Q9NT68 2774 aa3.59□□□□□ -1.84
STAG1-201ENST00000236698 FBN1P35555 2871 aaKnown RBP3.56□□□□□ -1.84
STAG1-201ENST00000236698 DCHS1Q96JQ0 3298 aa3.56□□□□□ -1.84
STAG1-201ENST00000236698 SPEGQ15772 3267 aa3.54□□□□□ -1.84
STAG1-201ENST00000236698 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
STAG1-201ENST00000236698 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
STAG1-201ENST00000236698 PKD1L1Q8TDX9 2849 aa3.53□□□□□ -1.84
STAG1-201ENST00000236698 SPTBN5Q9NRC6 3674 aaKnown RBP3.51□□□□□ -1.85
STAG1-201ENST00000236698 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
STAG1-201ENST00000236698 MYO15AQ9UKN7 3530 aa3.45□□□□□ -1.86
STAG1-201ENST00000236698 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
STAG1-201ENST00000236698 KRTAP10-10P60014 251 aa3.44□□□□□ -1.86
STAG1-201ENST00000236698 FBN3Q75N90 2809 aa3.44□□□□□ -1.86
STAG1-201ENST00000236698 MEGF8Q7Z7M0 2845 aa3.44□□□□□ -1.86
STAG1-201ENST00000236698 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
STAG1-201ENST00000236698 RELNP78509 3460 aa3.41□□□□□ -1.86
STAG1-201ENST00000236698 XP32Q5T750 250 aa3.4□□□□□ -1.86
STAG1-201ENST00000236698 LCE2BO14633 110 aa3.4□□□□□ -1.87
STAG1-201ENST00000236698 LCE2AQ5TA79 106 aaPredicted RBP3.4□□□□□ -1.87
STAG1-201ENST00000236698 MUC3AQ02505 3323 aa3.39□□□□□ -1.87
STAG1-201ENST00000236698 SRRM2Q9UQ35 2752 aaKnown RBP3.33□□□□□ -1.88
STAG1-201ENST00000236698 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
STAG1-201ENST00000236698 LORP23490 312 aaPredicted RBP3.28□□□□□ -1.88
STAG1-201ENST00000236698 COL7A1Q02388 2944 aa3.28□□□□□ -1.88
STAG1-201ENST00000236698 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
STAG1-201ENST00000236698 WDFY3Q8IZQ1 3526 aa3.25□□□□□ -1.89
STAG1-201ENST00000236698 ANK3Q12955 4377 aaKnown RBP3.24□□□□□ -1.89
STAG1-201ENST00000236698 KRTAP10-4P60372 401 aaPredicted RBP3.24□□□□□ -1.89
STAG1-201ENST00000236698 LAMA5O15230 3695 aa3.23□□□□□ -1.89
STAG1-201ENST00000236698 ZFHX4Q86UP3 3567 aa3.18□□□□□ -1.9
STAG1-201ENST00000236698 MT1HL1P0DM35 61 aa3.18□□□□□ -1.9
STAG1-201ENST00000236698 ZFHX3Q15911 3703 aa3.17□□□□□ -1.9
STAG1-201ENST00000236698 KRTAP12-1P59990 96 aa3.15□□□□□ -1.9
STAG1-201ENST00000236698 TRRAPQ9Y4A5 3859 aa3.12□□□□□ -1.91
STAG1-201ENST00000236698 SMG1Q96Q15 3661 aaKnown RBP3.1□□□□□ -1.91
STAG1-201ENST00000236698 ASPMQ8IZT6 3477 aa3.1□□□□□ -1.91
STAG1-201ENST00000236698 DMDP11532 3685 aa3.1□□□□□ -1.91
STAG1-201ENST00000236698 NBPF19A0A087WUL8 3843 aa3.07□□□□□ -1.92
STAG1-201ENST00000236698 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
STAG1-201ENST00000236698 BSNQ9UPA5 3926 aa3.05□□□□□ -1.92
STAG1-201ENST00000236698 MT3P25713 68 aa3.05□□□□□ -1.92
STAG1-201ENST00000236698 CUBNO60494 3623 aa3.04□□□□□ -1.92
STAG1-201ENST00000236698 CSMD2Q7Z408 3487 aa3.04□□□□□ -1.92
STAG1-201ENST00000236698 CSMD1Q96PZ7 3565 aa3.03□□□□□ -1.93
STAG1-201ENST00000236698 SVEP1Q4LDE5 3571 aa3.02□□□□□ -1.93
STAG1-201ENST00000236698 SPENQ96T58 3664 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms