RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 PRUNE2Q8WUY3 3088 aa3.06□□□□□ -1.92
KRR1-201ENST00000229214 CYSTM1Q9H1C7 97 aa3.06□□□□□ -1.92
KRR1-201ENST00000229214 ATMQ13315 3056 aa3.05□□□□□ -1.92
KRR1-201ENST00000229214 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
KRR1-201ENST00000229214 A6NN06 94 aa3.05□□□□□ -1.92
KRR1-201ENST00000229214 A0A0G2JQZ4 141 aa3.05□□□□□ -1.92
KRR1-201ENST00000229214 Q5VSD8 79 aa3.05□□□□□ -1.92
KRR1-201ENST00000229214 H0YAA0 97 aa3.04□□□□□ -1.92
KRR1-201ENST00000229214 KRTAP1-1Q07627 177 aa3.02□□□□□ -1.93
KRR1-201ENST00000229214 KRTAP1-3Q8IUG1 177 aa3.02□□□□□ -1.93
KRR1-201ENST00000229214 Q8NDZ9 215 aa3.01□□□□□ -1.93
KRR1-201ENST00000229214 FBN2P35556 2912 aa3□□□□□ -1.93
KRR1-201ENST00000229214 KRTAP11-1Q8IUC1 163 aa2.99□□□□□ -1.93
KRR1-201ENST00000229214 FBN3Q75N90 2809 aa2.99□□□□□ -1.93
KRR1-201ENST00000229214 KRTAP13-1Q8IUC0 172 aa2.98□□□□□ -1.93
KRR1-201ENST00000229214 ADGRG4Q8IZF6 3080 aa2.98□□□□□ -1.93
KRR1-201ENST00000229214 GOLGB1Q14789 3259 aaKnown RBP2.96□□□□□ -1.94
KRR1-201ENST00000229214 SMR3BP02814 79 aaPredicted RBP2.95□□□□□ -1.94
KRR1-201ENST00000229214 A8MU10 97 aa2.95□□□□□ -1.94
KRR1-201ENST00000229214 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
KRR1-201ENST00000229214 BOD1L1Q8NFC6 3051 aa2.95□□□□□ -1.94
KRR1-201ENST00000229214 INE1O15225 51 aa2.94□□□□□ -1.94
KRR1-201ENST00000229214 KRTAP23-1A1A580 65 aa2.94□□□□□ -1.94
KRR1-201ENST00000229214 RANBP2P49792 3224 aaKnown RBP2.92□□□□□ -1.94
KRR1-201ENST00000229214 P0C880 135 aa2.92□□□□□ -1.94
KRR1-201ENST00000229214 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
KRR1-201ENST00000229214 XIRP2A4UGR9 3374 aa2.89□□□□□ -1.95
KRR1-201ENST00000229214 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
KRR1-201ENST00000229214 KRTAP10-3P60369 221 aa2.88□□□□□ -1.95
KRR1-201ENST00000229214 FREM2Q5SZK8 3169 aa2.88□□□□□ -1.95
KRR1-201ENST00000229214 UNC80Q8N2C7 3258 aa2.88□□□□□ -1.95
KRR1-201ENST00000229214 USP34Q70CQ2 3546 aa2.87□□□□□ -1.95
KRR1-201ENST00000229214 FBN1P35555 2871 aaKnown RBP2.85□□□□□ -1.95
KRR1-201ENST00000229214 KRTAP10-1P60331 282 aa2.84□□□□□ -1.95
KRR1-201ENST00000229214 MKI67P46013 3256 aaKnown RBP2.84□□□□□ -1.96
KRR1-201ENST00000229214 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.96
KRR1-201ENST00000229214 KRTAP1-5Q9BYS1 174 aa2.84□□□□□ -1.96
KRR1-201ENST00000229214 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
KRR1-201ENST00000229214 HTTP42858 3142 aa2.83□□□□□ -1.96
KRR1-201ENST00000229214 CFAP47Q6ZTR5 3102 aa2.8□□□□□ -1.96
KRR1-201ENST00000229214 KRTAP13-4Q3LI77 160 aa2.79□□□□□ -1.96
KRR1-201ENST00000229214 OTOGQ6ZRI0 2925 aa2.78□□□□□ -1.96
KRR1-201ENST00000229214 XP32Q5T750 250 aa2.78□□□□□ -1.96
KRR1-201ENST00000229214 UTRNP46939 3433 aa2.76□□□□□ -1.97
KRR1-201ENST00000229214 KRTAP10-2P60368 255 aa2.76□□□□□ -1.97
KRR1-201ENST00000229214 KRTAP13-2Q52LG2 175 aa2.76□□□□□ -1.97
KRR1-201ENST00000229214 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
KRR1-201ENST00000229214 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
KRR1-201ENST00000229214 KRTAP1-4P0C5Y4 121 aa2.7□□□□□ -1.98
KRR1-201ENST00000229214 LAMA3Q16787 3333 aa2.69□□□□□ -1.98
KRR1-201ENST00000229214 COL6A3P12111 3177 aa2.68□□□□□ -1.98
KRR1-201ENST00000229214 VCANP13611 3396 aa2.68□□□□□ -1.98
KRR1-201ENST00000229214 SPEGQ15772 3267 aa2.68□□□□□ -1.98
KRR1-201ENST00000229214 ZFHX3Q15911 3703 aa2.64□□□□□ -1.99
KRR1-201ENST00000229214 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
KRR1-201ENST00000229214 LOC400499M0QZD8 3231 aa2.62□□□□□ -1.99
KRR1-201ENST00000229214 DNAH14Q0VDD8 3507 aa2.61□□□□□ -1.99
KRR1-201ENST00000229214 ZFHX4Q86UP3 3567 aa2.59□□□□□ -1.99
KRR1-201ENST00000229214 KRTAP7-1Q8IUC3 87 aa2.59□□□□□ -1.99
KRR1-201ENST00000229214 MT3P25713 68 aa2.56□□□□□ -2
KRR1-201ENST00000229214 EYSQ5T1H1 3165 aa2.54□□□□□ -2
KRR1-201ENST00000229214 MYO15AQ9UKN7 3530 aa2.52□□□□□ -2.01
KRR1-201ENST00000229214 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
KRR1-201ENST00000229214 KRTAP12-2P59991 146 aa2.51□□□□□ -2.01
KRR1-201ENST00000229214 CELSR3Q9NYQ7 3312 aa2.49□□□□□ -2.01
KRR1-201ENST00000229214 KRTAP15-1Q3LI76 137 aa2.48□□□□□ -2.01
KRR1-201ENST00000229214 DCHS1Q96JQ0 3298 aa2.47□□□□□ -2.01
KRR1-201ENST00000229214 A0A1B0GVY2 172 aa2.46□□□□□ -2.02
KRR1-201ENST00000229214 SZT2Q5T011 3432 aa2.46□□□□□ -2.02
KRR1-201ENST00000229214 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
KRR1-201ENST00000229214 LORP23490 312 aaPredicted RBP2.44□□□□□ -2.02
KRR1-201ENST00000229214 NBPF19A0A087WUL8 3843 aa2.42□□□□□ -2.02
KRR1-201ENST00000229214 BRCA2P51587 3418 aa2.42□□□□□ -2.02
KRR1-201ENST00000229214 SPTBN5Q9NRC6 3674 aaKnown RBP2.38□□□□□ -2.03
KRR1-201ENST00000229214 SPENQ96T58 3664 aaKnown RBP2.38□□□□□ -2.03
KRR1-201ENST00000229214 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
KRR1-201ENST00000229214 KRTAP10-6P60371 365 aaPredicted RBP2.36□□□□□ -2.03
KRR1-201ENST00000229214 CDH23Q9H251 3354 aa2.34□□□□□ -2.03
KRR1-201ENST00000229214 TRRAPQ9Y4A5 3859 aa2.33□□□□□ -2.04
KRR1-201ENST00000229214 WDFY3Q8IZQ1 3526 aa2.3□□□□□ -2.04
KRR1-201ENST00000229214 AKAP9Q99996 3911 aa2.29□□□□□ -2.04
KRR1-201ENST00000229214 RELNP78509 3460 aa2.26□□□□□ -2.05
KRR1-201ENST00000229214 KRTAP17-1Q9BYP8 105 aa2.26□□□□□ -2.05
KRR1-201ENST00000229214 KRTAP3-1Q9BYR8 98 aa2.25□□□□□ -2.05
KRR1-201ENST00000229214 SPRR2GQ9BYE4 73 aa2.22□□□□□ -2.05
KRR1-201ENST00000229214 CRCT1Q9UGL9 99 aa2.22□□□□□ -2.05
KRR1-201ENST00000229214 MUC3AQ02505 3323 aa2.21□□□□□ -2.06
KRR1-201ENST00000229214 BSNQ9UPA5 3926 aa2.21□□□□□ -2.06
KRR1-201ENST00000229214 DMDP11532 3685 aa2.21□□□□□ -2.06
KRR1-201ENST00000229214 ASPMQ8IZT6 3477 aa2.2□□□□□ -2.06
KRR1-201ENST00000229214 KRTAP3-2Q9BYR7 98 aa2.2□□□□□ -2.06
KRR1-201ENST00000229214 KRTAP10-7P60409 375 aaPredicted RBP2.19□□□□□ -2.06
KRR1-201ENST00000229214 SMG1Q96Q15 3661 aaKnown RBP2.18□□□□□ -2.06
KRR1-201ENST00000229214 ANK2Q01484 3957 aa2.18□□□□□ -2.06
KRR1-201ENST00000229214 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
KRR1-201ENST00000229214 ZNF469Q96JG9 3925 aaPredicted RBP2.18□□□□□ -2.06
KRR1-201ENST00000229214 KRTAP3-3Q9BYR6 98 aa2.17□□□□□ -2.06
KRR1-201ENST00000229214 CSMD1Q96PZ7 3565 aa2.16□□□□□ -2.06
KRR1-201ENST00000229214 MT1HL1P0DM35 61 aa2.16□□□□□ -2.06
KRR1-201ENST00000229214 HECTD4Q9Y4D8 3996 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms