RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 COL12A1Q99715 3063 aa4.52□□□□□ -1.69
C1GALT1-201ENST00000223122 DMXL1Q9Y485 3027 aa4.52□□□□□ -1.69
C1GALT1-201ENST00000223122 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
C1GALT1-201ENST00000223122 UTP20O75691 2785 aaKnown RBP4.51□□□□□ -1.69
C1GALT1-201ENST00000223122 CSMD1Q96PZ7 3565 aa4.51□□□□□ -1.69
C1GALT1-201ENST00000223122 ITPR1Q14643 2758 aa4.49□□□□□ -1.69
C1GALT1-201ENST00000223122 HRNRQ86YZ3 2850 aaPredicted RBP4.48□□□□□ -1.69
C1GALT1-201ENST00000223122 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
C1GALT1-201ENST00000223122 A8MUU9 505 aa4.47□□□□□ -1.69
C1GALT1-201ENST00000223122 NBEAL1Q6ZS30 2694 aa4.47□□□□□ -1.69
C1GALT1-201ENST00000223122 DMDP11532 3685 aa4.46□□□□□ -1.7
C1GALT1-201ENST00000223122 ITPR2Q14571 2701 aa4.46□□□□□ -1.7
C1GALT1-201ENST00000223122 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
C1GALT1-201ENST00000223122 FLNCQ14315 2725 aa4.45□□□□□ -1.7
C1GALT1-201ENST00000223122 APCP25054 2843 aa4.44□□□□□ -1.7
C1GALT1-201ENST00000223122 RELNP78509 3460 aa4.44□□□□□ -1.7
C1GALT1-201ENST00000223122 ASH1LQ9NR48 2969 aaKnown RBP4.44□□□□□ -1.7
C1GALT1-201ENST00000223122 SMG1Q96Q15 3661 aaKnown RBP4.43□□□□□ -1.7
C1GALT1-201ENST00000223122 LAMA5O15230 3695 aa4.42□□□□□ -1.7
C1GALT1-201ENST00000223122 KMT2BQ9UMN6 2715 aaPredicted RBP4.4□□□□□ -1.71
C1GALT1-201ENST00000223122 NOTCH1P46531 2555 aa4.4□□□□□ -1.71
C1GALT1-201ENST00000223122 UBR5O95071 2799 aaPredicted RBP4.4□□□□□ -1.71
C1GALT1-201ENST00000223122 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
C1GALT1-201ENST00000223122 KRTAP1-4P0C5Y4 121 aa4.39□□□□□ -1.71
C1GALT1-201ENST00000223122 COL6A5A8TX70 2615 aa4.39□□□□□ -1.71
C1GALT1-201ENST00000223122 HIVEP1P15822 2718 aa4.38□□□□□ -1.71
C1GALT1-201ENST00000223122 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
C1GALT1-201ENST00000223122 BAHCC1Q9P281 2608 aa4.38□□□□□ -1.71
C1GALT1-201ENST00000223122 CRYBG3Q68DQ2 2970 aa4.36□□□□□ -1.71
C1GALT1-201ENST00000223122 STAB1Q9NY15 2570 aa4.36□□□□□ -1.71
C1GALT1-201ENST00000223122 NSD1Q96L73 2696 aaPredicted RBP4.36□□□□□ -1.71
C1GALT1-201ENST00000223122 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
C1GALT1-201ENST00000223122 H0YAA0 97 aa4.35□□□□□ -1.71
C1GALT1-201ENST00000223122 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
C1GALT1-201ENST00000223122 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.72
C1GALT1-201ENST00000223122 XP32Q5T750 250 aa4.31□□□□□ -1.72
C1GALT1-201ENST00000223122 ZANQ9Y493 2812 aa4.3□□□□□ -1.72
C1GALT1-201ENST00000223122 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
C1GALT1-201ENST00000223122 NBPF19A0A087WUL8 3843 aa4.29□□□□□ -1.72
C1GALT1-201ENST00000223122 CELSR2Q9HCU4 2923 aa4.28□□□□□ -1.72
C1GALT1-201ENST00000223122 FBN2P35556 2912 aa4.28□□□□□ -1.72
C1GALT1-201ENST00000223122 STAB2Q8WWQ8 2551 aa4.27□□□□□ -1.73
C1GALT1-201ENST00000223122 A0A1B0GVY2 172 aa4.27□□□□□ -1.73
C1GALT1-201ENST00000223122 TNP1P09430 55 aa4.24□□□□□ -1.73
C1GALT1-201ENST00000223122 MUC3AQ02505 3323 aa4.24□□□□□ -1.73
C1GALT1-201ENST00000223122 DCHS2Q6V1P9 2916 aa4.23□□□□□ -1.73
C1GALT1-201ENST00000223122 SPENQ96T58 3664 aaKnown RBP4.23□□□□□ -1.73
C1GALT1-201ENST00000223122 BSNQ9UPA5 3926 aa4.22□□□□□ -1.73
C1GALT1-201ENST00000223122 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
C1GALT1-201ENST00000223122 ANK3Q12955 4377 aaKnown RBP4.2□□□□□ -1.74
C1GALT1-201ENST00000223122 P0C880 135 aa4.2□□□□□ -1.74
C1GALT1-201ENST00000223122 CELSR1Q9NYQ6 3014 aa4.19□□□□□ -1.74
C1GALT1-201ENST00000223122 FLG2Q5D862 2391 aaPredicted RBP4.17□□□□□ -1.74
C1GALT1-201ENST00000223122 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
C1GALT1-201ENST00000223122 KRTAP21-3Q3LHN1 58 aa4.16□□□□□ -1.74
C1GALT1-201ENST00000223122 NIPBLQ6KC79 2804 aaeCLIP4.14□□□□□ -1.75
C1GALT1-201ENST00000223122 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
C1GALT1-201ENST00000223122 NF1P21359 2839 aa4.11□□□□□ -1.75
C1GALT1-201ENST00000223122 MXRA5Q9NR99 2828 aa4.11□□□□□ -1.75
C1GALT1-201ENST00000223122 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
C1GALT1-201ENST00000223122 TENM4Q6N022 2769 aa4.1□□□□□ -1.75
C1GALT1-201ENST00000223122 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
C1GALT1-201ENST00000223122 ZFHX3Q15911 3703 aa4.08□□□□□ -1.76
C1GALT1-201ENST00000223122 CUBNO60494 3623 aa4.06□□□□□ -1.76
C1GALT1-201ENST00000223122 CSMD2Q7Z408 3487 aa4.06□□□□□ -1.76
C1GALT1-201ENST00000223122 PDZD2O15018 2839 aa4.05□□□□□ -1.76
C1GALT1-201ENST00000223122 VPS13CQ709C8 3753 aa4.05□□□□□ -1.76
C1GALT1-201ENST00000223122 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
C1GALT1-201ENST00000223122 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
C1GALT1-201ENST00000223122 TENM3Q9P273 2699 aa4.04□□□□□ -1.76
C1GALT1-201ENST00000223122 TGP01266 2768 aa4.02□□□□□ -1.77
C1GALT1-201ENST00000223122 TENM2Q9NT68 2774 aa4□□□□□ -1.77
C1GALT1-201ENST00000223122 HUWE1Q7Z6Z7 4374 aaKnown RBP3.99□□□□□ -1.77
C1GALT1-201ENST00000223122 AKAP9Q99996 3911 aa3.99□□□□□ -1.77
C1GALT1-201ENST00000223122 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
C1GALT1-201ENST00000223122 TRRAPQ9Y4A5 3859 aa3.96□□□□□ -1.77
C1GALT1-201ENST00000223122 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
C1GALT1-201ENST00000223122 TENM1Q9UKZ4 2725 aa3.93□□□□□ -1.78
C1GALT1-201ENST00000223122 OTOGQ6ZRI0 2925 aa3.9□□□□□ -1.79
C1GALT1-201ENST00000223122 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
C1GALT1-201ENST00000223122 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
C1GALT1-201ENST00000223122 FBN1P35555 2871 aaKnown RBP3.88□□□□□ -1.79
C1GALT1-201ENST00000223122 VWFP04275 2813 aa3.84□□□□□ -1.8
C1GALT1-201ENST00000223122 ZNF469Q96JG9 3925 aaPredicted RBP3.82□□□□□ -1.8
C1GALT1-201ENST00000223122 CSMD3Q7Z407 3707 aa3.8□□□□□ -1.8
C1GALT1-201ENST00000223122 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
C1GALT1-201ENST00000223122 KRTAP3-3Q9BYR6 98 aa3.79□□□□□ -1.8
C1GALT1-201ENST00000223122 PKD1L1Q8TDX9 2849 aa3.78□□□□□ -1.8
C1GALT1-201ENST00000223122 KRTAP3-2Q9BYR7 98 aa3.77□□□□□ -1.81
C1GALT1-201ENST00000223122 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
C1GALT1-201ENST00000223122 MT1HL1P0DM35 61 aa3.74□□□□□ -1.81
C1GALT1-201ENST00000223122 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
C1GALT1-201ENST00000223122 DNAH9Q9NYC9 4486 aa3.72□□□□□ -1.81
C1GALT1-201ENST00000223122 KRTAP10-4P60372 401 aaPredicted RBP3.7□□□□□ -1.82
C1GALT1-201ENST00000223122 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
C1GALT1-201ENST00000223122 DNAH1Q9P2D7 4330 aa3.68□□□□□ -1.82
C1GALT1-201ENST00000223122 DNAH10Q8IVF4 4471 aa3.68□□□□□ -1.82
C1GALT1-201ENST00000223122 KRTAP4-5Q9BYR2 181 aa3.68□□□□□ -1.82
C1GALT1-201ENST00000223122 SRRM2Q9UQ35 2752 aaKnown RBP3.67□□□□□ -1.82
C1GALT1-201ENST00000223122 DNAH3Q8TD57 4116 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms