RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 PRUNE2Q8WUY3 3088 aa5.42□□□□□ -1.54
TRPS1-201ENST00000220888 RANBP2P49792 3224 aaKnown RBP5.42□□□□□ -1.54
TRPS1-201ENST00000220888 NIPBLQ6KC79 2804 aaeCLIP5.4□□□□□ -1.54
TRPS1-201ENST00000220888 TENM1Q9UKZ4 2725 aa5.38□□□□□ -1.55
TRPS1-201ENST00000220888 LAMA2P24043 3122 aaKnown RBP5.35□□□□□ -1.55
TRPS1-201ENST00000220888 DMXL2Q8TDJ6 3036 aa5.33□□□□□ -1.56
TRPS1-201ENST00000220888 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
TRPS1-201ENST00000220888 H0YAA0 97 aa5.32□□□□□ -1.56
TRPS1-201ENST00000220888 TRIOO75962 3097 aa5.29□□□□□ -1.56
TRPS1-201ENST00000220888 LRBAP50851 2863 aa5.28□□□□□ -1.56
TRPS1-201ENST00000220888 LAMA1P25391 3075 aa5.28□□□□□ -1.56
TRPS1-201ENST00000220888 ASH1LQ9NR48 2969 aaKnown RBP5.27□□□□□ -1.57
TRPS1-201ENST00000220888 COL12A1Q99715 3063 aa5.26□□□□□ -1.57
TRPS1-201ENST00000220888 CELSR2Q9HCU4 2923 aa5.26□□□□□ -1.57
TRPS1-201ENST00000220888 KALRNO60229 2985 aa5.25□□□□□ -1.57
TRPS1-201ENST00000220888 LAMA3Q16787 3333 aa5.24□□□□□ -1.57
TRPS1-201ENST00000220888 ATMQ13315 3056 aa5.24□□□□□ -1.57
TRPS1-201ENST00000220888 HTTP42858 3142 aa5.23□□□□□ -1.57
TRPS1-201ENST00000220888 NF1P21359 2839 aa5.22□□□□□ -1.57
TRPS1-201ENST00000220888 DCHS2Q6V1P9 2916 aa5.21□□□□□ -1.58
TRPS1-201ENST00000220888 MKI67P46013 3256 aaKnown RBP5.18□□□□□ -1.58
TRPS1-201ENST00000220888 FRYLO94915 3013 aa5.14□□□□□ -1.59
TRPS1-201ENST00000220888 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
TRPS1-201ENST00000220888 VPS13AQ96RL7 3174 aa5.12□□□□□ -1.59
TRPS1-201ENST00000220888 FREM2Q5SZK8 3169 aa5.11□□□□□ -1.59
TRPS1-201ENST00000220888 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
TRPS1-201ENST00000220888 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
TRPS1-201ENST00000220888 PDZD2O15018 2839 aa5.09□□□□□ -1.6
TRPS1-201ENST00000220888 XIRP2A4UGR9 3374 aa5.08□□□□□ -1.6
TRPS1-201ENST00000220888 ZZEF1O43149 2961 aa5.08□□□□□ -1.6
TRPS1-201ENST00000220888 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
TRPS1-201ENST00000220888 UNC80Q8N2C7 3258 aa5.05□□□□□ -1.6
TRPS1-201ENST00000220888 TGP01266 2768 aa5.05□□□□□ -1.6
TRPS1-201ENST00000220888 EYSQ5T1H1 3165 aa5.03□□□□□ -1.6
TRPS1-201ENST00000220888 NBEAQ8NFP9 2946 aa5.03□□□□□ -1.6
TRPS1-201ENST00000220888 BOD1L1Q8NFC6 3051 aa5.03□□□□□ -1.6
TRPS1-201ENST00000220888 BRCA2P51587 3418 aa5.01□□□□□ -1.61
TRPS1-201ENST00000220888 TNRC18O15417 2968 aaPredicted RBP5□□□□□ -1.61
TRPS1-201ENST00000220888 VWFP04275 2813 aa4.99□□□□□ -1.61
TRPS1-201ENST00000220888 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
TRPS1-201ENST00000220888 ZANQ9Y493 2812 aa4.96□□□□□ -1.61
TRPS1-201ENST00000220888 ADGRG4Q8IZF6 3080 aa4.96□□□□□ -1.62
TRPS1-201ENST00000220888 FBN3Q75N90 2809 aa4.95□□□□□ -1.62
TRPS1-201ENST00000220888 VCANP13611 3396 aa4.95□□□□□ -1.62
TRPS1-201ENST00000220888 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
TRPS1-201ENST00000220888 CELSR3Q9NYQ7 3312 aa4.91□□□□□ -1.62
TRPS1-201ENST00000220888 MXRA5Q9NR99 2828 aa4.91□□□□□ -1.62
TRPS1-201ENST00000220888 CFAP47Q6ZTR5 3102 aa4.9□□□□□ -1.62
TRPS1-201ENST00000220888 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
TRPS1-201ENST00000220888 DMXL1Q9Y485 3027 aa4.87□□□□□ -1.63
TRPS1-201ENST00000220888 CELSR1Q9NYQ6 3014 aa4.87□□□□□ -1.63
TRPS1-201ENST00000220888 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
TRPS1-201ENST00000220888 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
TRPS1-201ENST00000220888 FBN2P35556 2912 aa4.82□□□□□ -1.64
TRPS1-201ENST00000220888 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
TRPS1-201ENST00000220888 COL6A3P12111 3177 aa4.8□□□□□ -1.64
TRPS1-201ENST00000220888 CDH23Q9H251 3354 aa4.75□□□□□ -1.65
TRPS1-201ENST00000220888 SZT2Q5T011 3432 aa4.73□□□□□ -1.65
TRPS1-201ENST00000220888 HRNRQ86YZ3 2850 aaPredicted RBP4.72□□□□□ -1.65
TRPS1-201ENST00000220888 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
TRPS1-201ENST00000220888 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.66
TRPS1-201ENST00000220888 SPEGQ15772 3267 aa4.68□□□□□ -1.66
TRPS1-201ENST00000220888 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
TRPS1-201ENST00000220888 USP34Q70CQ2 3546 aa4.62□□□□□ -1.67
TRPS1-201ENST00000220888 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
TRPS1-201ENST00000220888 INE1O15225 51 aa4.59□□□□□ -1.67
TRPS1-201ENST00000220888 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
TRPS1-201ENST00000220888 COL7A1Q02388 2944 aa4.53□□□□□ -1.68
TRPS1-201ENST00000220888 FBN1P35555 2871 aaKnown RBP4.52□□□□□ -1.69
TRPS1-201ENST00000220888 MEGF8Q7Z7M0 2845 aa4.52□□□□□ -1.69
TRPS1-201ENST00000220888 KRTAP10-4P60372 401 aaPredicted RBP4.51□□□□□ -1.69
TRPS1-201ENST00000220888 KRTAP3-2Q9BYR7 98 aa4.51□□□□□ -1.69
TRPS1-201ENST00000220888 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
TRPS1-201ENST00000220888 KRTAP3-3Q9BYR6 98 aa4.5□□□□□ -1.69
TRPS1-201ENST00000220888 DNAH14Q0VDD8 3507 aa4.5□□□□□ -1.69
TRPS1-201ENST00000220888 DCHS1Q96JQ0 3298 aa4.5□□□□□ -1.69
TRPS1-201ENST00000220888 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
TRPS1-201ENST00000220888 OTOGQ6ZRI0 2925 aa4.46□□□□□ -1.7
TRPS1-201ENST00000220888 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
TRPS1-201ENST00000220888 MYO15AQ9UKN7 3530 aa4.42□□□□□ -1.7
TRPS1-201ENST00000220888 ZFHX4Q86UP3 3567 aa4.42□□□□□ -1.7
TRPS1-201ENST00000220888 NBPF19A0A087WUL8 3843 aa4.38□□□□□ -1.71
TRPS1-201ENST00000220888 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
TRPS1-201ENST00000220888 LOC400499M0QZD8 3231 aa4.33□□□□□ -1.72
TRPS1-201ENST00000220888 WDFY3Q8IZQ1 3526 aa4.3□□□□□ -1.72
TRPS1-201ENST00000220888 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
TRPS1-201ENST00000220888 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
TRPS1-201ENST00000220888 MT1HP80294 61 aa4.27□□□□□ -1.73
TRPS1-201ENST00000220888 SPTBN5Q9NRC6 3674 aaKnown RBP4.25□□□□□ -1.73
TRPS1-201ENST00000220888 ANK3Q12955 4377 aaKnown RBP4.24□□□□□ -1.73
TRPS1-201ENST00000220888 RELNP78509 3460 aa4.23□□□□□ -1.73
TRPS1-201ENST00000220888 ALMS1Q8TCU4 4167 aa4.21□□□□□ -1.73
TRPS1-201ENST00000220888 MT2AP02795 61 aa4.2□□□□□ -1.74
TRPS1-201ENST00000220888 HUWE1Q7Z6Z7 4374 aaKnown RBP4.19□□□□□ -1.74
TRPS1-201ENST00000220888 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
TRPS1-201ENST00000220888 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
TRPS1-201ENST00000220888 SPRR2EP22531 72 aa4.08□□□□□ -1.76
TRPS1-201ENST00000220888 SPRR2BP35325 72 aa4.08□□□□□ -1.76
TRPS1-201ENST00000220888 SPRR2AP35326 72 aa4.08□□□□□ -1.76
TRPS1-201ENST00000220888 MT1FP04733 61 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms