RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 NSD1Q96L73 2696 aaPredicted RBP9.3□□□□□ -0.92
EXTL3-201ENST00000220562 STAB2Q8WWQ8 2551 aa9.28□□□□□ -0.92
EXTL3-201ENST00000220562 SZT2Q5T011 3432 aa9.28□□□□□ -0.92
EXTL3-201ENST00000220562 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
EXTL3-201ENST00000220562 LRBAP50851 2863 aa9.27□□□□□ -0.93
EXTL3-201ENST00000220562 VCANP13611 3396 aa9.26□□□□□ -0.93
EXTL3-201ENST00000220562 MAP1AP78559 2803 aaPredicted RBP9.25□□□□□ -0.93
EXTL3-201ENST00000220562 APCP25054 2843 aa9.23□□□□□ -0.93
EXTL3-201ENST00000220562 ITPR1Q14643 2758 aa9.22□□□□□ -0.93
EXTL3-201ENST00000220562 KRTAP10-10P60014 251 aa9.21□□□□□ -0.93
EXTL3-201ENST00000220562 P0C880 135 aa9.2□□□□□ -0.94
EXTL3-201ENST00000220562 LAMA1P25391 3075 aa9.19□□□□□ -0.94
EXTL3-201ENST00000220562 UTP20O75691 2785 aaKnown RBP9.16□□□□□ -0.94
EXTL3-201ENST00000220562 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
EXTL3-201ENST00000220562 ATMQ13315 3056 aa9.15□□□□□ -0.95
EXTL3-201ENST00000220562 HIVEP1P15822 2718 aa9.08□□□□□ -0.96
EXTL3-201ENST00000220562 SPTBN5Q9NRC6 3674 aaKnown RBP9.08□□□□□ -0.96
EXTL3-201ENST00000220562 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
EXTL3-201ENST00000220562 TACC2O95359 2948 aa9.07□□□□□ -0.96
EXTL3-201ENST00000220562 CRYBG3Q68DQ2 2970 aa9.05□□□□□ -0.96
EXTL3-201ENST00000220562 COL12A1Q99715 3063 aa9.05□□□□□ -0.96
EXTL3-201ENST00000220562 BOD1L1Q8NFC6 3051 aa9.05□□□□□ -0.96
EXTL3-201ENST00000220562 CFAP47Q6ZTR5 3102 aa9.04□□□□□ -0.96
EXTL3-201ENST00000220562 ADGRG4Q8IZF6 3080 aa9.04□□□□□ -0.96
EXTL3-201ENST00000220562 DMXL2Q8TDJ6 3036 aa9.03□□□□□ -0.96
EXTL3-201ENST00000220562 ASH1LQ9NR48 2969 aaKnown RBP9□□□□□ -0.97
EXTL3-201ENST00000220562 USP34Q70CQ2 3546 aa8.97□□□□□ -0.97
EXTL3-201ENST00000220562 REV3LO60673 3130 aa8.96□□□□□ -0.97
EXTL3-201ENST00000220562 EYSQ5T1H1 3165 aa8.96□□□□□ -0.98
EXTL3-201ENST00000220562 NBEAQ8NFP9 2946 aa8.95□□□□□ -0.98
EXTL3-201ENST00000220562 FRYLO94915 3013 aa8.94□□□□□ -0.98
EXTL3-201ENST00000220562 ZZEF1O43149 2961 aa8.92□□□□□ -0.98
EXTL3-201ENST00000220562 KRTAP12-2P59991 146 aa8.89□□□□□ -0.99
EXTL3-201ENST00000220562 FLNCQ14315 2725 aa8.87□□□□□ -0.99
EXTL3-201ENST00000220562 SPEGQ15772 3267 aa8.85□□□□□ -0.99
EXTL3-201ENST00000220562 CELSR2Q9HCU4 2923 aa8.77□□□□□ -1.01
EXTL3-201ENST00000220562 TENM4Q6N022 2769 aa8.74□□□□□ -1.01
EXTL3-201ENST00000220562 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
EXTL3-201ENST00000220562 NIPBLQ6KC79 2804 aaeCLIP8.71□□□□□ -1.01
EXTL3-201ENST00000220562 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
EXTL3-201ENST00000220562 DCHS2Q6V1P9 2916 aa8.69□□□□□ -1.02
EXTL3-201ENST00000220562 TNRC18O15417 2968 aaPredicted RBP8.68□□□□□ -1.02
EXTL3-201ENST00000220562 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
EXTL3-201ENST00000220562 DMXL1Q9Y485 3027 aa8.58□□□□□ -1.04
EXTL3-201ENST00000220562 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
EXTL3-201ENST00000220562 ZANQ9Y493 2812 aa8.54□□□□□ -1.04
EXTL3-201ENST00000220562 TENM2Q9NT68 2774 aa8.52□□□□□ -1.05
EXTL3-201ENST00000220562 TGP01266 2768 aa8.51□□□□□ -1.05
EXTL3-201ENST00000220562 MYO15AQ9UKN7 3530 aa8.49□□□□□ -1.05
EXTL3-201ENST00000220562 LOC400499M0QZD8 3231 aa8.47□□□□□ -1.05
EXTL3-201ENST00000220562 CELSR1Q9NYQ6 3014 aa8.47□□□□□ -1.05
EXTL3-201ENST00000220562 FBN2P35556 2912 aa8.47□□□□□ -1.05
EXTL3-201ENST00000220562 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.06
EXTL3-201ENST00000220562 WDFY3Q8IZQ1 3526 aa8.44□□□□□ -1.06
EXTL3-201ENST00000220562 TENM1Q9UKZ4 2725 aa8.43□□□□□ -1.06
EXTL3-201ENST00000220562 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
EXTL3-201ENST00000220562 NF1P21359 2839 aa8.42□□□□□ -1.06
EXTL3-201ENST00000220562 NBPF19A0A087WUL8 3843 aa8.32□□□□□ -1.08
EXTL3-201ENST00000220562 KRTAP10-6P60371 365 aaPredicted RBP8.32□□□□□ -1.08
EXTL3-201ENST00000220562 DCHS1Q96JQ0 3298 aa8.31□□□□□ -1.08
EXTL3-201ENST00000220562 RELNP78509 3460 aa8.29□□□□□ -1.08
EXTL3-201ENST00000220562 ZFHX4Q86UP3 3567 aa8.25□□□□□ -1.09
EXTL3-201ENST00000220562 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
EXTL3-201ENST00000220562 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
EXTL3-201ENST00000220562 CSMD1Q96PZ7 3565 aa8.19□□□□□ -1.1
EXTL3-201ENST00000220562 MXRA5Q9NR99 2828 aa8.16□□□□□ -1.1
EXTL3-201ENST00000220562 PDZD2O15018 2839 aa8.06□□□□□ -1.12
EXTL3-201ENST00000220562 MT1HL1P0DM35 61 aa8.06□□□□□ -1.12
EXTL3-201ENST00000220562 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
EXTL3-201ENST00000220562 LAMA5O15230 3695 aa8.01□□□□□ -1.13
EXTL3-201ENST00000220562 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
EXTL3-201ENST00000220562 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
EXTL3-201ENST00000220562 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
EXTL3-201ENST00000220562 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
EXTL3-201ENST00000220562 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.14
EXTL3-201ENST00000220562 VWFP04275 2813 aa7.95□□□□□ -1.14
EXTL3-201ENST00000220562 INE1O15225 51 aa7.89□□□□□ -1.15
EXTL3-201ENST00000220562 HUWE1Q7Z6Z7 4374 aaKnown RBP7.88□□□□□ -1.15
EXTL3-201ENST00000220562 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.16
EXTL3-201ENST00000220562 DMDP11532 3685 aa7.83□□□□□ -1.16
EXTL3-201ENST00000220562 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
EXTL3-201ENST00000220562 ALMS1Q8TCU4 4167 aa7.8□□□□□ -1.16
EXTL3-201ENST00000220562 SVEP1Q4LDE5 3571 aa7.77□□□□□ -1.17
EXTL3-201ENST00000220562 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
EXTL3-201ENST00000220562 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
EXTL3-201ENST00000220562 ZFHX3Q15911 3703 aa7.72□□□□□ -1.17
EXTL3-201ENST00000220562 OTOGQ6ZRI0 2925 aa7.72□□□□□ -1.17
EXTL3-201ENST00000220562 FBN1P35555 2871 aaKnown RBP7.71□□□□□ -1.17
EXTL3-201ENST00000220562 FBN3Q75N90 2809 aa7.67□□□□□ -1.18
EXTL3-201ENST00000220562 SPENQ96T58 3664 aaKnown RBP7.66□□□□□ -1.18
EXTL3-201ENST00000220562 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
EXTL3-201ENST00000220562 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.18
EXTL3-201ENST00000220562 LORP23490 312 aaPredicted RBP7.62□□□□□ -1.19
EXTL3-201ENST00000220562 CSMD2Q7Z408 3487 aa7.61□□□□□ -1.19
EXTL3-201ENST00000220562 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.2
EXTL3-201ENST00000220562 BSNQ9UPA5 3926 aa7.55□□□□□ -1.2
EXTL3-201ENST00000220562 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
EXTL3-201ENST00000220562 CUBNO60494 3623 aa7.42□□□□□ -1.22
EXTL3-201ENST00000220562 MUC3AQ02505 3323 aa7.39□□□□□ -1.23
EXTL3-201ENST00000220562 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms