RNA–Protein interactions for RNA: ENST00000219476.7

TSC2-201, Transcript of TSC complex subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TSC2, Length 6,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-201ENST00000219476 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
TSC2-201ENST00000219476 FREM2Q5SZK8 3169 aa8.2□□□□□ -1.1
TSC2-201ENST00000219476 GCN1Q92616 2671 aaKnown RBP8.18□□□□□ -1.1
TSC2-201ENST00000219476 MGAQ8IWI9 3026 aa8.17□□□□□ -1.1
TSC2-201ENST00000219476 COL6A3P12111 3177 aa8.15□□□□□ -1.1
TSC2-201ENST00000219476 BAHCC1Q9P281 2608 aa8.12□□□□□ -1.11
TSC2-201ENST00000219476 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
TSC2-201ENST00000219476 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.12
TSC2-201ENST00000219476 EYSQ5T1H1 3165 aa8.08□□□□□ -1.12
TSC2-201ENST00000219476 NBEAL2Q6ZNJ1 2754 aa8.06□□□□□ -1.12
TSC2-201ENST00000219476 NOTCH1P46531 2555 aa8.06□□□□□ -1.12
TSC2-201ENST00000219476 IGSF10Q6WRI0 2623 aa8.03□□□□□ -1.12
TSC2-201ENST00000219476 REV3LO60673 3130 aa8.03□□□□□ -1.12
TSC2-201ENST00000219476 FRYQ5TBA9 3013 aa8.02□□□□□ -1.13
TSC2-201ENST00000219476 FRYLO94915 3013 aa8.01□□□□□ -1.13
TSC2-201ENST00000219476 DSPP15924 2871 aaKnown RBP7.95□□□□□ -1.14
TSC2-201ENST00000219476 BOD1L1Q8NFC6 3051 aa7.89□□□□□ -1.15
TSC2-201ENST00000219476 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
TSC2-201ENST00000219476 NSD1Q96L73 2696 aaPredicted RBP7.88□□□□□ -1.15
TSC2-201ENST00000219476 NBEAQ8NFP9 2946 aa7.88□□□□□ -1.15
TSC2-201ENST00000219476 KALRNO60229 2985 aa7.85□□□□□ -1.15
TSC2-201ENST00000219476 MAP1AP78559 2803 aaPredicted RBP7.84□□□□□ -1.15
TSC2-201ENST00000219476 KMT2BQ9UMN6 2715 aaPredicted RBP7.82□□□□□ -1.16
TSC2-201ENST00000219476 CFAP47Q6ZTR5 3102 aa7.82□□□□□ -1.16
TSC2-201ENST00000219476 LRBAP50851 2863 aa7.79□□□□□ -1.16
TSC2-201ENST00000219476 ITPR2Q14571 2701 aa7.79□□□□□ -1.16
TSC2-201ENST00000219476 ZFHX4Q86UP3 3567 aa7.78□□□□□ -1.16
TSC2-201ENST00000219476 DMDP11532 3685 aa7.77□□□□□ -1.17
TSC2-201ENST00000219476 ZNF292O60281 2723 aa7.75□□□□□ -1.17
TSC2-201ENST00000219476 APCP25054 2843 aa7.74□□□□□ -1.17
TSC2-201ENST00000219476 INE1O15225 51 aa7.73□□□□□ -1.17
TSC2-201ENST00000219476 ADGRG4Q8IZF6 3080 aa7.72□□□□□ -1.17
TSC2-201ENST00000219476 ASPMQ8IZT6 3477 aa7.71□□□□□ -1.17
TSC2-201ENST00000219476 DCHS1Q96JQ0 3298 aa7.71□□□□□ -1.17
TSC2-201ENST00000219476 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
TSC2-201ENST00000219476 UBR5O95071 2799 aaPredicted RBP7.64□□□□□ -1.19
TSC2-201ENST00000219476 SMG1Q96Q15 3661 aaKnown RBP7.63□□□□□ -1.19
TSC2-201ENST00000219476 LOC400499M0QZD8 3231 aa7.63□□□□□ -1.19
TSC2-201ENST00000219476 ATMQ13315 3056 aa7.63□□□□□ -1.19
TSC2-201ENST00000219476 ITPR1Q14643 2758 aa7.59□□□□□ -1.19
TSC2-201ENST00000219476 ZZEF1O43149 2961 aa7.59□□□□□ -1.19
TSC2-201ENST00000219476 DMXL2Q8TDJ6 3036 aa7.58□□□□□ -1.2
TSC2-201ENST00000219476 TACC2O95359 2948 aa7.57□□□□□ -1.2
TSC2-201ENST00000219476 SPENQ96T58 3664 aaKnown RBP7.57□□□□□ -1.2
TSC2-201ENST00000219476 CSMD1Q96PZ7 3565 aa7.57□□□□□ -1.2
TSC2-201ENST00000219476 HIVEP1P15822 2718 aa7.52□□□□□ -1.21
TSC2-201ENST00000219476 ASH1LQ9NR48 2969 aaKnown RBP7.51□□□□□ -1.21
TSC2-201ENST00000219476 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
TSC2-201ENST00000219476 COL12A1Q99715 3063 aa7.49□□□□□ -1.21
TSC2-201ENST00000219476 DMXL1Q9Y485 3027 aa7.48□□□□□ -1.21
TSC2-201ENST00000219476 UTP20O75691 2785 aaKnown RBP7.46□□□□□ -1.21
TSC2-201ENST00000219476 TNRC18O15417 2968 aaPredicted RBP7.46□□□□□ -1.22
TSC2-201ENST00000219476 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
TSC2-201ENST00000219476 TENM4Q6N022 2769 aa7.44□□□□□ -1.22
TSC2-201ENST00000219476 CRYBG3Q68DQ2 2970 aa7.43□□□□□ -1.22
TSC2-201ENST00000219476 LAMA5O15230 3695 aa7.42□□□□□ -1.22
TSC2-201ENST00000219476 RELNP78509 3460 aa7.42□□□□□ -1.22
TSC2-201ENST00000219476 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
TSC2-201ENST00000219476 SVEP1Q4LDE5 3571 aa7.38□□□□□ -1.23
TSC2-201ENST00000219476 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
TSC2-201ENST00000219476 MUC3AQ02505 3323 aa7.34□□□□□ -1.23
TSC2-201ENST00000219476 TGP01266 2768 aa7.31□□□□□ -1.24
TSC2-201ENST00000219476 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
TSC2-201ENST00000219476 HRNRQ86YZ3 2850 aaPredicted RBP7.25□□□□□ -1.25
TSC2-201ENST00000219476 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
TSC2-201ENST00000219476 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
TSC2-201ENST00000219476 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
TSC2-201ENST00000219476 TENM2Q9NT68 2774 aa7.23□□□□□ -1.25
TSC2-201ENST00000219476 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
TSC2-201ENST00000219476 FLNCQ14315 2725 aa7.19□□□□□ -1.26
TSC2-201ENST00000219476 CELSR2Q9HCU4 2923 aa7.14□□□□□ -1.27
TSC2-201ENST00000219476 TENM1Q9UKZ4 2725 aa7.14□□□□□ -1.27
TSC2-201ENST00000219476 ZANQ9Y493 2812 aa7.11□□□□□ -1.27
TSC2-201ENST00000219476 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
TSC2-201ENST00000219476 CUBNO60494 3623 aa7.08□□□□□ -1.28
TSC2-201ENST00000219476 FBN2P35556 2912 aa7.08□□□□□ -1.28
TSC2-201ENST00000219476 DCHS2Q6V1P9 2916 aa7.03□□□□□ -1.28
TSC2-201ENST00000219476 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
TSC2-201ENST00000219476 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
TSC2-201ENST00000219476 BSNQ9UPA5 3926 aa7.02□□□□□ -1.29
TSC2-201ENST00000219476 NBPF19A0A087WUL8 3843 aa7□□□□□ -1.29
TSC2-201ENST00000219476 VPS13CQ709C8 3753 aa6.96□□□□□ -1.29
TSC2-201ENST00000219476 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
TSC2-201ENST00000219476 CELSR1Q9NYQ6 3014 aa6.94□□□□□ -1.3
TSC2-201ENST00000219476 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
TSC2-201ENST00000219476 CSMD2Q7Z408 3487 aa6.9□□□□□ -1.3
TSC2-201ENST00000219476 KRTAP3-3Q9BYR6 98 aa6.9□□□□□ -1.31
TSC2-201ENST00000219476 NF1P21359 2839 aa6.87□□□□□ -1.31
TSC2-201ENST00000219476 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
TSC2-201ENST00000219476 PDZD2O15018 2839 aa6.8□□□□□ -1.32
TSC2-201ENST00000219476 MXRA5Q9NR99 2828 aa6.77□□□□□ -1.33
TSC2-201ENST00000219476 SPRR2FQ96RM1 72 aa6.73□□□□□ -1.33
TSC2-201ENST00000219476 AKAP9Q99996 3911 aa6.71□□□□□ -1.34
TSC2-201ENST00000219476 ANK3Q12955 4377 aaKnown RBP6.66□□□□□ -1.34
TSC2-201ENST00000219476 FBN3Q75N90 2809 aa6.61□□□□□ -1.35
TSC2-201ENST00000219476 VWFP04275 2813 aa6.57□□□□□ -1.36
TSC2-201ENST00000219476 PKD1L1Q8TDX9 2849 aa6.54□□□□□ -1.36
TSC2-201ENST00000219476 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
TSC2-201ENST00000219476 TRRAPQ9Y4A5 3859 aa6.51□□□□□ -1.37
TSC2-201ENST00000219476 ALMS1Q8TCU4 4167 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms