RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 DCHS2Q6V1P9 2916 aa7.25□□□□□ -1.25
LMCD1-201ENST00000157600 ADM2Q7Z4H4 148 aa7.24□□□□□ -1.25
LMCD1-201ENST00000157600 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
LMCD1-201ENST00000157600 UNC80Q8N2C7 3258 aa7.22□□□□□ -1.25
LMCD1-201ENST00000157600 Q6ZRN7 208 aaPredicted RBP7.21□□□□□ -1.26
LMCD1-201ENST00000157600 CRYBG3Q68DQ2 2970 aa7.2□□□□□ -1.26
LMCD1-201ENST00000157600 TENM4Q6N022 2769 aa7.2□□□□□ -1.26
LMCD1-201ENST00000157600 TNRC18O15417 2968 aaPredicted RBP7.19□□□□□ -1.26
LMCD1-201ENST00000157600 KRTAP13-1Q8IUC0 172 aa7.18□□□□□ -1.26
LMCD1-201ENST00000157600 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
LMCD1-201ENST00000157600 DNAH14Q0VDD8 3507 aa7.16□□□□□ -1.26
LMCD1-201ENST00000157600 VCANP13611 3396 aa7.15□□□□□ -1.26
LMCD1-201ENST00000157600 COL6A3P12111 3177 aa7.15□□□□□ -1.27
LMCD1-201ENST00000157600 HRNRQ86YZ3 2850 aaPredicted RBP7.15□□□□□ -1.27
LMCD1-201ENST00000157600 A6NN06 94 aa7.13□□□□□ -1.27
LMCD1-201ENST00000157600 FBN2P35556 2912 aa7.12□□□□□ -1.27
LMCD1-201ENST00000157600 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
LMCD1-201ENST00000157600 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
LMCD1-201ENST00000157600 A8MUU9 505 aa7.08□□□□□ -1.28
LMCD1-201ENST00000157600 REV3LO60673 3130 aa7.07□□□□□ -1.28
LMCD1-201ENST00000157600 MXRA5Q9NR99 2828 aa7.03□□□□□ -1.28
LMCD1-201ENST00000157600 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
LMCD1-201ENST00000157600 KRTAP16-1A8MUX0 517 aa7.02□□□□□ -1.29
LMCD1-201ENST00000157600 KRTAP11-1Q8IUC1 163 aa7.02□□□□□ -1.29
LMCD1-201ENST00000157600 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
LMCD1-201ENST00000157600 C20orf166-AS1Q96NR2 134 aa7.01□□□□□ -1.29
LMCD1-201ENST00000157600 TGP01266 2768 aa7.01□□□□□ -1.29
LMCD1-201ENST00000157600 SZT2Q5T011 3432 aa6.99□□□□□ -1.29
LMCD1-201ENST00000157600 CELSR1Q9NYQ6 3014 aa6.98□□□□□ -1.29
LMCD1-201ENST00000157600 PDZD2O15018 2839 aa6.98□□□□□ -1.29
LMCD1-201ENST00000157600 PP632Q6XCG6 107 aa6.97□□□□□ -1.29
LMCD1-201ENST00000157600 DMXL1Q9Y485 3027 aa6.97□□□□□ -1.29
LMCD1-201ENST00000157600 CFAP47Q6ZTR5 3102 aa6.93□□□□□ -1.3
LMCD1-201ENST00000157600 TNP1P09430 55 aa6.92□□□□□ -1.3
LMCD1-201ENST00000157600 SPTBN5Q9NRC6 3674 aaKnown RBP6.91□□□□□ -1.3
LMCD1-201ENST00000157600 EYSQ5T1H1 3165 aa6.88□□□□□ -1.31
LMCD1-201ENST00000157600 A8MU10 97 aa6.86□□□□□ -1.31
LMCD1-201ENST00000157600 PKD1L1Q8TDX9 2849 aa6.82□□□□□ -1.32
LMCD1-201ENST00000157600 SPEGQ15772 3267 aa6.8□□□□□ -1.32
LMCD1-201ENST00000157600 VWFP04275 2813 aa6.78□□□□□ -1.32
LMCD1-201ENST00000157600 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
LMCD1-201ENST00000157600 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
LMCD1-201ENST00000157600 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
LMCD1-201ENST00000157600 LOC400499M0QZD8 3231 aa6.71□□□□□ -1.34
LMCD1-201ENST00000157600 XP32Q5T750 250 aa6.7□□□□□ -1.34
LMCD1-201ENST00000157600 TENM2Q9NT68 2774 aa6.67□□□□□ -1.34
LMCD1-201ENST00000157600 MYO15AQ9UKN7 3530 aa6.64□□□□□ -1.35
LMCD1-201ENST00000157600 C10orf95Q9H7T3 257 aa6.63□□□□□ -1.35
LMCD1-201ENST00000157600 H0YAA0 97 aa6.63□□□□□ -1.35
LMCD1-201ENST00000157600 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
LMCD1-201ENST00000157600 P0C880 135 aa6.57□□□□□ -1.36
LMCD1-201ENST00000157600 NBPF19A0A087WUL8 3843 aa6.53□□□□□ -1.36
LMCD1-201ENST00000157600 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
LMCD1-201ENST00000157600 KRTAP13-3Q3SY46 172 aa6.51□□□□□ -1.37
LMCD1-201ENST00000157600 COL7A1Q02388 2944 aa6.5□□□□□ -1.37
LMCD1-201ENST00000157600 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
LMCD1-201ENST00000157600 WDFY3Q8IZQ1 3526 aa6.5□□□□□ -1.37
LMCD1-201ENST00000157600 FBN1P35555 2871 aaKnown RBP6.49□□□□□ -1.37
LMCD1-201ENST00000157600 ZFHX3Q15911 3703 aa6.39□□□□□ -1.39
LMCD1-201ENST00000157600 MEGF8Q7Z7M0 2845 aa6.39□□□□□ -1.39
LMCD1-201ENST00000157600 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
LMCD1-201ENST00000157600 DCHS1Q96JQ0 3298 aa6.34□□□□□ -1.39
LMCD1-201ENST00000157600 FBN3Q75N90 2809 aa6.34□□□□□ -1.39
LMCD1-201ENST00000157600 LAMA5O15230 3695 aa6.33□□□□□ -1.4
LMCD1-201ENST00000157600 ASPMQ8IZT6 3477 aa6.31□□□□□ -1.4
LMCD1-201ENST00000157600 RELNP78509 3460 aa6.28□□□□□ -1.4
LMCD1-201ENST00000157600 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
LMCD1-201ENST00000157600 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
LMCD1-201ENST00000157600 SPENQ96T58 3664 aaKnown RBP6.24□□□□□ -1.41
LMCD1-201ENST00000157600 ZFHX4Q86UP3 3567 aa6.23□□□□□ -1.41
LMCD1-201ENST00000157600 OTOGQ6ZRI0 2925 aa6.2□□□□□ -1.42
LMCD1-201ENST00000157600 KRTAP12-2P59991 146 aa6.15□□□□□ -1.43
LMCD1-201ENST00000157600 TRRAPQ9Y4A5 3859 aa6.14□□□□□ -1.43
LMCD1-201ENST00000157600 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
LMCD1-201ENST00000157600 CSMD1Q96PZ7 3565 aa6.1□□□□□ -1.43
LMCD1-201ENST00000157600 SMG1Q96Q15 3661 aaKnown RBP6.09□□□□□ -1.43
LMCD1-201ENST00000157600 DMDP11532 3685 aa6.09□□□□□ -1.43
LMCD1-201ENST00000157600 KRTAP3-1Q9BYR8 98 aa5.96□□□□□ -1.46
LMCD1-201ENST00000157600 VPS13CQ709C8 3753 aa5.96□□□□□ -1.46
LMCD1-201ENST00000157600 SVEP1Q4LDE5 3571 aa5.91□□□□□ -1.46
LMCD1-201ENST00000157600 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
LMCD1-201ENST00000157600 BSNQ9UPA5 3926 aa5.88□□□□□ -1.47
LMCD1-201ENST00000157600 INE1O15225 51 aa5.86□□□□□ -1.47
LMCD1-201ENST00000157600 MUC3AQ02505 3323 aa5.85□□□□□ -1.47
LMCD1-201ENST00000157600 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
LMCD1-201ENST00000157600 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
LMCD1-201ENST00000157600 AKAP9Q99996 3911 aa5.82□□□□□ -1.48
LMCD1-201ENST00000157600 CUBNO60494 3623 aa5.78□□□□□ -1.48
LMCD1-201ENST00000157600 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
LMCD1-201ENST00000157600 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
LMCD1-201ENST00000157600 CSMD2Q7Z408 3487 aa5.65□□□□□ -1.5
LMCD1-201ENST00000157600 MT1HL1P0DM35 61 aa5.65□□□□□ -1.5
LMCD1-201ENST00000157600 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.51
LMCD1-201ENST00000157600 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
LMCD1-201ENST00000157600 ALMS1Q8TCU4 4167 aa5.61□□□□□ -1.51
LMCD1-201ENST00000157600 CSMD3Q7Z407 3707 aa5.56□□□□□ -1.52
LMCD1-201ENST00000157600 KRTAP10-4P60372 401 aaPredicted RBP5.54□□□□□ -1.52
LMCD1-201ENST00000157600 ZNF469Q96JG9 3925 aaPredicted RBP5.5□□□□□ -1.53
LMCD1-201ENST00000157600 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
LMCD1-201ENST00000157600 HUWE1Q7Z6Z7 4374 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms