RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 FRYLO94915 3013 aa12.94□□□□□ -0.34
TARBP1-201ENST00000040877 KALRNO60229 2985 aa12.92□□□□□ -0.34
TARBP1-201ENST00000040877 APCP25054 2843 aa12.91□□□□□ -0.34
TARBP1-201ENST00000040877 KRTAP25-1Q3LHN0 102 aa12.91□□□□□ -0.34
TARBP1-201ENST00000040877 FREM2Q5SZK8 3169 aa12.91□□□□□ -0.34
TARBP1-201ENST00000040877 A8MUU9 505 aa12.84□□□□□ -0.35
TARBP1-201ENST00000040877 LRBAP50851 2863 aa12.83□□□□□ -0.36
TARBP1-201ENST00000040877 KRTAP16-1A8MUX0 517 aa12.8□□□□□ -0.36
TARBP1-201ENST00000040877 DNAH14Q0VDD8 3507 aa12.8□□□□□ -0.36
TARBP1-201ENST00000040877 BOD1L1Q8NFC6 3051 aa12.79□□□□□ -0.36
TARBP1-201ENST00000040877 ADGRG4Q8IZF6 3080 aa12.78□□□□□ -0.36
TARBP1-201ENST00000040877 C20orf166-AS1Q96NR2 134 aa12.77□□□□□ -0.36
TARBP1-201ENST00000040877 DMXL2Q8TDJ6 3036 aa12.75□□□□□ -0.37
TARBP1-201ENST00000040877 ZZEF1O43149 2961 aa12.69□□□□□ -0.38
TARBP1-201ENST00000040877 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
TARBP1-201ENST00000040877 NBEAQ8NFP9 2946 aa12.63□□□□□ -0.39
TARBP1-201ENST00000040877 ASH1LQ9NR48 2969 aaKnown RBP12.62□□□□□ -0.39
TARBP1-201ENST00000040877 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
TARBP1-201ENST00000040877 KRTAP1-4P0C5Y4 121 aa12.62□□□□□ -0.39
TARBP1-201ENST00000040877 NDUFAF8A1L188 74 aa12.59□□□□□ -0.39
TARBP1-201ENST00000040877 SPEGQ15772 3267 aa12.56□□□□□ -0.4
TARBP1-201ENST00000040877 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
TARBP1-201ENST00000040877 DCHS2Q6V1P9 2916 aa12.52□□□□□ -0.4
TARBP1-201ENST00000040877 CRYBG3Q68DQ2 2970 aa12.52□□□□□ -0.41
TARBP1-201ENST00000040877 XP32Q5T750 250 aa12.46□□□□□ -0.41
TARBP1-201ENST00000040877 CFAP47Q6ZTR5 3102 aa12.45□□□□□ -0.42
TARBP1-201ENST00000040877 TNRC18O15417 2968 aaPredicted RBP12.43□□□□□ -0.42
TARBP1-201ENST00000040877 TNP1P09430 55 aa12.38□□□□□ -0.43
TARBP1-201ENST00000040877 DMXL1Q9Y485 3027 aa12.37□□□□□ -0.43
TARBP1-201ENST00000040877 TPRXLQ17RH7 258 aa12.37□□□□□ -0.43
TARBP1-201ENST00000040877 HRNRQ86YZ3 2850 aaPredicted RBP12.34□□□□□ -0.43
TARBP1-201ENST00000040877 SPTBN5Q9NRC6 3674 aaKnown RBP12.32□□□□□ -0.44
TARBP1-201ENST00000040877 NF1P21359 2839 aa12.26□□□□□ -0.45
TARBP1-201ENST00000040877 TENM3Q9P273 2699 aa12.25□□□□□ -0.45
TARBP1-201ENST00000040877 TENM1Q9UKZ4 2725 aa12.18□□□□□ -0.46
TARBP1-201ENST00000040877 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
TARBP1-201ENST00000040877 PP632Q6XCG6 107 aa12.12□□□□□ -0.47
TARBP1-201ENST00000040877 KRTAP13-3Q3SY46 172 aa12.11□□□□□ -0.47
TARBP1-201ENST00000040877 FBN2P35556 2912 aa12.11□□□□□ -0.47
TARBP1-201ENST00000040877 USP34Q70CQ2 3546 aa12.1□□□□□ -0.47
TARBP1-201ENST00000040877 MYO15AQ9UKN7 3530 aa12.05□□□□□ -0.48
TARBP1-201ENST00000040877 H0YAA0 97 aa12.04□□□□□ -0.48
TARBP1-201ENST00000040877 C10orf95Q9H7T3 257 aa12.04□□□□□ -0.48
TARBP1-201ENST00000040877 MXRA5Q9NR99 2828 aa12.03□□□□□ -0.48
TARBP1-201ENST00000040877 TENM2Q9NT68 2774 aa12.02□□□□□ -0.49
TARBP1-201ENST00000040877 A0A1B0GVY2 172 aa12.01□□□□□ -0.49
TARBP1-201ENST00000040877 KRTAP10-8P60410 259 aa11.98□□□□□ -0.49
TARBP1-201ENST00000040877 CELSR1Q9NYQ6 3014 aa11.85□□□□□ -0.51
TARBP1-201ENST00000040877 KRTAP10-10P60014 251 aa11.85□□□□□ -0.51
TARBP1-201ENST00000040877 P0C880 135 aa11.8□□□□□ -0.52
TARBP1-201ENST00000040877 PRO2289Q9P1D8 64 aa11.78□□□□□ -0.52
TARBP1-201ENST00000040877 DCHS1Q96JQ0 3298 aa11.74□□□□□ -0.53
TARBP1-201ENST00000040877 TGP01266 2768 aa11.7□□□□□ -0.54
TARBP1-201ENST00000040877 RELNP78509 3460 aa11.67□□□□□ -0.54
TARBP1-201ENST00000040877 PKD1L1Q8TDX9 2849 aa11.66□□□□□ -0.54
TARBP1-201ENST00000040877 PDZD2O15018 2839 aa11.62□□□□□ -0.55
TARBP1-201ENST00000040877 MUC3AQ02505 3323 aa11.62□□□□□ -0.55
TARBP1-201ENST00000040877 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
TARBP1-201ENST00000040877 LAMA5O15230 3695 aa11.5□□□□□ -0.57
TARBP1-201ENST00000040877 ASPMQ8IZT6 3477 aa11.46□□□□□ -0.58
TARBP1-201ENST00000040877 VWFP04275 2813 aa11.42□□□□□ -0.58
TARBP1-201ENST00000040877 OTOGQ6ZRI0 2925 aa11.31□□□□□ -0.6
TARBP1-201ENST00000040877 DMDP11532 3685 aa11.24□□□□□ -0.61
TARBP1-201ENST00000040877 ZFHX4Q86UP3 3567 aa11.22□□□□□ -0.61
TARBP1-201ENST00000040877 KRTAP12-2P59991 146 aa11.19□□□□□ -0.62
TARBP1-201ENST00000040877 FBN1P35555 2871 aaKnown RBP11.17□□□□□ -0.62
TARBP1-201ENST00000040877 KRTAP13-4Q3LI77 160 aa11.16□□□□□ -0.62
TARBP1-201ENST00000040877 KRTAP3-1Q9BYR8 98 aa11.15□□□□□ -0.62
TARBP1-201ENST00000040877 KRTAP12-1P59990 96 aa11.1□□□□□ -0.63
TARBP1-201ENST00000040877 SRRM2Q9UQ35 2752 aaKnown RBP11.04□□□□□ -0.64
TARBP1-201ENST00000040877 ZFHX3Q15911 3703 aa10.99□□□□□ -0.65
TARBP1-201ENST00000040877 SMG1Q96Q15 3661 aaKnown RBP10.93□□□□□ -0.66
TARBP1-201ENST00000040877 MT1HL1P0DM35 61 aa10.92□□□□□ -0.66
TARBP1-201ENST00000040877 NBPF19A0A087WUL8 3843 aa10.9□□□□□ -0.66
TARBP1-201ENST00000040877 FBN3Q75N90 2809 aa10.9□□□□□ -0.67
TARBP1-201ENST00000040877 KRTAP10-6P60371 365 aaPredicted RBP10.83□□□□□ -0.68
TARBP1-201ENST00000040877 ANK3Q12955 4377 aaKnown RBP10.83□□□□□ -0.68
TARBP1-201ENST00000040877 MEGF8Q7Z7M0 2845 aa10.75□□□□□ -0.69
TARBP1-201ENST00000040877 CSMD1Q96PZ7 3565 aa10.75□□□□□ -0.69
TARBP1-201ENST00000040877 CUBNO60494 3623 aa10.73□□□□□ -0.69
TARBP1-201ENST00000040877 CSMD2Q7Z408 3487 aa10.7□□□□□ -0.7
TARBP1-201ENST00000040877 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
TARBP1-201ENST00000040877 SVEP1Q4LDE5 3571 aa10.66□□□□□ -0.7
TARBP1-201ENST00000040877 COL7A1Q02388 2944 aa10.6□□□□□ -0.71
TARBP1-201ENST00000040877 KRTAP15-1Q3LI76 137 aa10.58□□□□□ -0.72
TARBP1-201ENST00000040877 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
TARBP1-201ENST00000040877 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.74
TARBP1-201ENST00000040877 SPENQ96T58 3664 aaKnown RBP10.42□□□□□ -0.74
TARBP1-201ENST00000040877 KRTAP4-5Q9BYR2 181 aa10.4□□□□□ -0.74
TARBP1-201ENST00000040877 TRRAPQ9Y4A5 3859 aa10.34□□□□□ -0.75
TARBP1-201ENST00000040877 KRTAP10-12P60413 245 aa10.27□□□□□ -0.77
TARBP1-201ENST00000040877 HUWE1Q7Z6Z7 4374 aaKnown RBP10.22□□□□□ -0.77
TARBP1-201ENST00000040877 INE1O15225 51 aa10.18□□□□□ -0.78
TARBP1-201ENST00000040877 ALMS1Q8TCU4 4167 aa10.13□□□□□ -0.79
TARBP1-201ENST00000040877 KRTAP23-1A1A580 65 aa10.1□□□□□ -0.79
TARBP1-201ENST00000040877 BSNQ9UPA5 3926 aa10.01□□□□□ -0.81
TARBP1-201ENST00000040877 KRTAP12-3P60328 96 aa9.96□□□□□ -0.81
TARBP1-201ENST00000040877 LCE3AQ5TA76 89 aa9.77□□□□□ -0.85
TARBP1-201ENST00000040877 LORP23490 312 aaPredicted RBP9.77□□□□□ -0.85
TARBP1-201ENST00000040877 DNAH9Q9NYC9 4486 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms