RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 FLNCQ14315 2725 aa8.44□□□□□ -1.06
RB1CC1-201ENST00000025008 TACC2O95359 2948 aa8.43□□□□□ -1.06
RB1CC1-201ENST00000025008 DMXL2Q8TDJ6 3036 aa8.39□□□□□ -1.07
RB1CC1-201ENST00000025008 XP32Q5T750 250 aa8.35□□□□□ -1.07
RB1CC1-201ENST00000025008 ATMQ13315 3056 aa8.33□□□□□ -1.08
RB1CC1-201ENST00000025008 LRBAP50851 2863 aa8.32□□□□□ -1.08
RB1CC1-201ENST00000025008 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
RB1CC1-201ENST00000025008 XIRP2A4UGR9 3374 aa8.28□□□□□ -1.08
RB1CC1-201ENST00000025008 UNC80Q8N2C7 3258 aa8.27□□□□□ -1.09
RB1CC1-201ENST00000025008 A0A1B0GVY2 172 aa8.27□□□□□ -1.09
RB1CC1-201ENST00000025008 ADGRG4Q8IZF6 3080 aa8.27□□□□□ -1.09
RB1CC1-201ENST00000025008 BRCA2P51587 3418 aa8.26□□□□□ -1.09
RB1CC1-201ENST00000025008 CELSR2Q9HCU4 2923 aa8.26□□□□□ -1.09
RB1CC1-201ENST00000025008 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
RB1CC1-201ENST00000025008 COL12A1Q99715 3063 aa8.24□□□□□ -1.09
RB1CC1-201ENST00000025008 TENM4Q6N022 2769 aa8.19□□□□□ -1.1
RB1CC1-201ENST00000025008 FRYLO94915 3013 aa8.19□□□□□ -1.1
RB1CC1-201ENST00000025008 CELSR3Q9NYQ7 3312 aa8.18□□□□□ -1.1
RB1CC1-201ENST00000025008 DCHS2Q6V1P9 2916 aa8.14□□□□□ -1.11
RB1CC1-201ENST00000025008 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
RB1CC1-201ENST00000025008 ZZEF1O43149 2961 aa8.1□□□□□ -1.11
RB1CC1-201ENST00000025008 LAMA1P25391 3075 aa8.07□□□□□ -1.12
RB1CC1-201ENST00000025008 ZANQ9Y493 2812 aa8.07□□□□□ -1.12
RB1CC1-201ENST00000025008 TENM3Q9P273 2699 aa8.06□□□□□ -1.12
RB1CC1-201ENST00000025008 TGP01266 2768 aa8.06□□□□□ -1.12
RB1CC1-201ENST00000025008 REV3LO60673 3130 aa8.06□□□□□ -1.12
RB1CC1-201ENST00000025008 BOD1L1Q8NFC6 3051 aa8.05□□□□□ -1.12
RB1CC1-201ENST00000025008 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
RB1CC1-201ENST00000025008 KRTAP21-3Q3LHN1 58 aa8□□□□□ -1.13
RB1CC1-201ENST00000025008 VCANP13611 3396 aa7.97□□□□□ -1.13
RB1CC1-201ENST00000025008 KRTAP12-2P59991 146 aa7.97□□□□□ -1.13
RB1CC1-201ENST00000025008 CDH23Q9H251 3354 aa7.95□□□□□ -1.14
RB1CC1-201ENST00000025008 CRYBG3Q68DQ2 2970 aa7.93□□□□□ -1.14
RB1CC1-201ENST00000025008 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
RB1CC1-201ENST00000025008 HRNRQ86YZ3 2850 aaPredicted RBP7.9□□□□□ -1.14
RB1CC1-201ENST00000025008 COL6A3P12111 3177 aa7.89□□□□□ -1.15
RB1CC1-201ENST00000025008 NF1P21359 2839 aa7.89□□□□□ -1.15
RB1CC1-201ENST00000025008 TENM1Q9UKZ4 2725 aa7.88□□□□□ -1.15
RB1CC1-201ENST00000025008 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
RB1CC1-201ENST00000025008 FBN2P35556 2912 aa7.87□□□□□ -1.15
RB1CC1-201ENST00000025008 CFAP47Q6ZTR5 3102 aa7.87□□□□□ -1.15
RB1CC1-201ENST00000025008 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
RB1CC1-201ENST00000025008 TNRC18O15417 2968 aaPredicted RBP7.85□□□□□ -1.15
RB1CC1-201ENST00000025008 EYSQ5T1H1 3165 aa7.82□□□□□ -1.16
RB1CC1-201ENST00000025008 DNAH14Q0VDD8 3507 aa7.8□□□□□ -1.16
RB1CC1-201ENST00000025008 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
RB1CC1-201ENST00000025008 SZT2Q5T011 3432 aa7.75□□□□□ -1.17
RB1CC1-201ENST00000025008 TENM2Q9NT68 2774 aa7.67□□□□□ -1.18
RB1CC1-201ENST00000025008 CELSR1Q9NYQ6 3014 aa7.66□□□□□ -1.18
RB1CC1-201ENST00000025008 DMXL1Q9Y485 3027 aa7.63□□□□□ -1.19
RB1CC1-201ENST00000025008 KRTAP10-6P60371 365 aaPredicted RBP7.63□□□□□ -1.19
RB1CC1-201ENST00000025008 PDZD2O15018 2839 aa7.63□□□□□ -1.19
RB1CC1-201ENST00000025008 MXRA5Q9NR99 2828 aa7.6□□□□□ -1.19
RB1CC1-201ENST00000025008 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
RB1CC1-201ENST00000025008 SPEGQ15772 3267 aa7.49□□□□□ -1.21
RB1CC1-201ENST00000025008 PKD1L1Q8TDX9 2849 aa7.47□□□□□ -1.21
RB1CC1-201ENST00000025008 USP34Q70CQ2 3546 aa7.46□□□□□ -1.22
RB1CC1-201ENST00000025008 INE1O15225 51 aa7.42□□□□□ -1.22
RB1CC1-201ENST00000025008 VWFP04275 2813 aa7.4□□□□□ -1.22
RB1CC1-201ENST00000025008 LOC400499M0QZD8 3231 aa7.38□□□□□ -1.23
RB1CC1-201ENST00000025008 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
RB1CC1-201ENST00000025008 MYO15AQ9UKN7 3530 aa7.28□□□□□ -1.24
RB1CC1-201ENST00000025008 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
RB1CC1-201ENST00000025008 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
RB1CC1-201ENST00000025008 FBN3Q75N90 2809 aa7.21□□□□□ -1.26
RB1CC1-201ENST00000025008 SPTBN5Q9NRC6 3674 aaKnown RBP7.2□□□□□ -1.26
RB1CC1-201ENST00000025008 MEGF8Q7Z7M0 2845 aa7.17□□□□□ -1.26
RB1CC1-201ENST00000025008 SRRM2Q9UQ35 2752 aaKnown RBP7.15□□□□□ -1.27
RB1CC1-201ENST00000025008 DCHS1Q96JQ0 3298 aa7.14□□□□□ -1.27
RB1CC1-201ENST00000025008 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
RB1CC1-201ENST00000025008 WDFY3Q8IZQ1 3526 aa7.12□□□□□ -1.27
RB1CC1-201ENST00000025008 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
RB1CC1-201ENST00000025008 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
RB1CC1-201ENST00000025008 RELNP78509 3460 aa7.02□□□□□ -1.29
RB1CC1-201ENST00000025008 MT1HL1P0DM35 61 aa7.02□□□□□ -1.29
RB1CC1-201ENST00000025008 COL7A1Q02388 2944 aa6.96□□□□□ -1.3
RB1CC1-201ENST00000025008 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
RB1CC1-201ENST00000025008 OTOGQ6ZRI0 2925 aa6.9□□□□□ -1.3
RB1CC1-201ENST00000025008 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
RB1CC1-201ENST00000025008 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
RB1CC1-201ENST00000025008 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
RB1CC1-201ENST00000025008 CSMD1Q96PZ7 3565 aa6.8□□□□□ -1.32
RB1CC1-201ENST00000025008 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
RB1CC1-201ENST00000025008 ANK3Q12955 4377 aaKnown RBP6.71□□□□□ -1.33
RB1CC1-201ENST00000025008 ASPMQ8IZT6 3477 aa6.66□□□□□ -1.34
RB1CC1-201ENST00000025008 NBPF19A0A087WUL8 3843 aa6.64□□□□□ -1.35
RB1CC1-201ENST00000025008 LAMA5O15230 3695 aa6.58□□□□□ -1.36
RB1CC1-201ENST00000025008 SMG1Q96Q15 3661 aaKnown RBP6.57□□□□□ -1.36
RB1CC1-201ENST00000025008 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
RB1CC1-201ENST00000025008 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
RB1CC1-201ENST00000025008 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
RB1CC1-201ENST00000025008 KRTAP4-5Q9BYR2 181 aa6.49□□□□□ -1.37
RB1CC1-201ENST00000025008 MUC3AQ02505 3323 aa6.46□□□□□ -1.38
RB1CC1-201ENST00000025008 HUWE1Q7Z6Z7 4374 aaKnown RBP6.44□□□□□ -1.38
RB1CC1-201ENST00000025008 SVEP1Q4LDE5 3571 aa6.44□□□□□ -1.38
RB1CC1-201ENST00000025008 CUBNO60494 3623 aa6.41□□□□□ -1.38
RB1CC1-201ENST00000025008 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
RB1CC1-201ENST00000025008 CSMD2Q7Z408 3487 aa6.34□□□□□ -1.39
RB1CC1-201ENST00000025008 SPENQ96T58 3664 aaKnown RBP6.34□□□□□ -1.39
RB1CC1-201ENST00000025008 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms