RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Psg25Q497W1 475 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm26566Q8CAC1 153 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Higd1bQ99JY6 98 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Lama5Q61001 3718 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 P01792 123 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Reg1P43137 165 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Defa26Q3L180 93 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Tmem136Q3TYE7 245 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gng5Q80SZ7 68 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Hint1P70349 126 aaKnown RBP7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm10447Q3UQ92 135 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Mrpl16Q99N93 251 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Atp6v0e1Q9CQD8 81 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Q9D8L0 127 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Pgpep1Q9ESW8 209 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm17727E9Q4V7 109 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm10203F6QJ09 66 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Defb18Q30KP5 85 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 P04944 107 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 P0C1Z5 52 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Tmem189Q99LQ7 271 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Q9CR34 168 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm6525A0A0A6YW33 106 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm16442D3YZG3 307 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Scgb2a2J3KMP9 96 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Mtatp8P03930 67 aa7.55□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Trbv1A0A0B4J1G7 116 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm13030A2APQ6 143 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm15056F6ZR08 88 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm6970F7DCP6 221 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Olfr433Q7TRV9 314 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Klk7Q91VE3 249 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Rasl11bQ922H7 247 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 MrapQ9D159 127 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Crybb3Q9JJU9 211 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Trav16A0A075B653 116 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Trav7-5A0A0G2JFX6 112 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Olfr1369-ps1A0A140T8K7 317 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Pfn1P62962 140 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 SelplgQ62170 397 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ighv7-4A0A0A6YXL5 121 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Tm4sf19E9Q9H8 206 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Smad7O35253 426 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Adrb3P25962 400 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Oosp2Q4FZG8 168 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Srsf2Q62093 221 aaKnown RBP7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ypel4Q65Z93 127 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Rbfox2Q8BP71 449 aaKnown RBP7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Mcrip2Q9CQB2 160 aaKnown RBP7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 DysfQ9ESD7 2090 aa7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Hcfc1Q61191 2045 aaKnown RBP7.54□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Trav8-1A0A075B641 109 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ighv9-1A0A0B4J1P3 117 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Cela2aP05208 271 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Atp6v0cP63082 155 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 RhogP84096 191 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 OstcQ78XF5 149 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Fam24aQ8CF27 98 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Scnm1Q8K136 229 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Vmn1r70Q8R254 298 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Pla2g2dQ9WVF6 144 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 P01674 108 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Slc17a2Q5SZA1 478 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Mob4Q6PEB6 225 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Duxbl2Q7TNE6 350 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Hrct1Q9D6B9 109 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Slc25a39Q9D8K8 359 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ttc28Q80XJ3 2450 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Map1aQ9QYR6 2776 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Prpf8Q99PV0 2335 aaKnown RBP7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Lgals6O54891 301 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 P04219 140 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm21370Q3T9V6 190 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Saxo2Q8BQB6 394 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Trank1Q8BV79 2999 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Olfr1323Q8VF35 309 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Mrpl33Q9CQP0 65 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Fxyd4Q9D2W0 88 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm7849D3YX03 116 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm20604F8WIA3 75 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm21060J3KMU4 56 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 NrepQ07475 68 aa7.53□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Nat8b-psE0CYC6 232 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Myod1P10085 318 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Ypel3P61237 119 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Prok1Q14A28 105 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Gm10803Q3TZS6 135 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Slc25a48Q8BW66 306 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Rbmxl2Q9DAE2 385 aaKnown RBP7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 MNCb-2875Q9DCB3 74 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Zfp983E9PUT0 460 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Vmn1r119E9Q4H3 307 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Gm3512L7N206 146 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Ascl2O35885 263 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Ins2P01326 110 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Lcn2P11672 200 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 NdpP48744 131 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Zfand3Q497H0 227 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Minos1Q7TNS2 76 aa7.52□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 TcraP01849 138 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms