RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Fmc1Q9CR13 113 aa9.73□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Ighv1-54A0A075B5W5 117 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 2310009B15RikA0A0A6YWI4 143 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Igkv6-25A0A140T8N7 115 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 P01794 123 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Q9DAQ5 155 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Spry4Q9WTP2 300 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 LenepQ9WVB6 61 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Col6a3E9PWQ3 3284 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Pnrc2Q9CR73 140 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Tln2Q71LX4 2375 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Gm3618D3Z4P5 127 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Clpsl2Q3UW21 102 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Prdm6Q3UZD5 596 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Gm2916Q9D9B9 127 aa9.72□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Pcnx1Q9QYC1 2344 aa9.71□□□□□ -0.85
Bdnf-205ENSMUST00000111045 Trav14-3A0A075B607 120 aa9.71□□□□□ -0.85
Bdnf-205ENSMUST00000111045 CampP51437 172 aa9.71□□□□□ -0.85
Bdnf-205ENSMUST00000111045 2210407C18RikQ6YI28 220 aa9.71□□□□□ -0.85
Bdnf-205ENSMUST00000111045 D430019H16RikJ3QPM6 83 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 MscO88940 201 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm10277Q6R5C6 214 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Ifitm2Q99J93 144 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Timm8a1Q9WVA2 97 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Tanc2A2A690 1994 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 MetrnQ8C1Q4 291 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Olfr1242Q8VGM6 306 aa9.71□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Brd3osA0A1B0GRB6 84 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 P01791 123 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Chchd5Q9CQP3 110 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Wdr38Q9D994 303 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Cdip1Q9DB75 208 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Chd7A2AJK6 2986 aaKnown RBP9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Ins2P01326 110 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rnf182Q8C432 247 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Ovol2Q8CIV7 274 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 OtorQ9JIE3 128 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Dchs2A0A0A6YW72 3346 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Vma21-psA0A140T8R2 101 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 P01729 129 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 C2cd4dP0CG09 341 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Pate2Q3UW31 111 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rbfox3Q8BIF2 374 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 D730048I06RikQ9CQB8 106 aa9.7□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Ighv14-3A0A075B5R9 117 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 9230102O04RikA2ASX7 82 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 1700003H04RikE9PXM2 192 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm43517E9PYS1 339 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rpl35aO55142 110 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Vpreb1P13372 142 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Q0VG49 157 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm12888Q3UW77 119 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 AtmQ62388 3066 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 CenpfE9Q3P4 2997 aaKnown RBP9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Dock9Q8BIK4 2055 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 E030025P04RikA2A6V5 185 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm5294J3QP53 216 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 CrygsO35486 178 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Lyz1P17897 148 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Dnal4Q9DCM4 105 aa9.69□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Trav21-dv12A0A075B6C4 109 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm20481G3UXK4 153 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Defb47Q30KN1 79 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Cep250Q60952 2414 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Trip12G5E870 2025 aaKnown RBP9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rev3lQ61493 3122 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Igkv4-51A0N8I8 119 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 P01811 117 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Cox6a1P43024 111 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Klk5Q9D140 293 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Ncoa6Q9JL19 2067 aa9.68□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Smr2O09133 150 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Igkv6-32A0A140T8N9 115 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 CrygbP04344 175 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Sod1P08228 154 aaKnown RBP9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Cops9Q3U898 57 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rpp25lQ99JH1 163 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rchy1Q9CR50 261 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Dennd4cA6H8H2 1906 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Trav14n-2A0A0G2JDF5 121 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rbm3O89086 153 aaKnown RBP9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Snrnp40Q6PE01 358 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Znf146Q8BQN6 292 aa9.67□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Inafm1E9PV59 130 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm10337F7DEP7 55 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 A630023A22RikJ3QP60 199 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 P01674 108 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Fxyd3Q61835 88 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Ucn2Q99ML8 113 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rnf138Q9CQE0 245 aaKnown RBP9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm26938S4R185 226 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Fer1l4A3KGK3 1992 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 A0A1Y7VLU2 103 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 S100a4P07091 101 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Myod1P10085 318 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Vwc2lQ505H4 222 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Tmem89Q9DA04 169 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Nup210Q9QY81 1886 aaKnown RBP9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Gm21983D6RFS9 131 aa9.66□□□□□ -0.86
Bdnf-205ENSMUST00000111045 Rpl32-psP17932 135 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms