RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Col11a1Q61245 1804 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 Q4KKZ1 196 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 P01792 123 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 IappP12968 93 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 ElaneQ3UP87 265 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 Cox6a1P43024 111 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 NdpP48744 131 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 Mustn1Q99JI1 82 aa11.78□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 Ighv14-1A0A075B5R4 117 aa11.77□□□□□ -0.52
Pcdha1-201ENSMUST00000070797 Ighv8-4A0A0A6YW26 117 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Ighv1-37A0A0A6YW32 117 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Fam168aQ8BGZ2 244 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Igkv19-93A0A0G2JFZ3 115 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Socs3O35718 225 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Trbv31A0A075B5J5 111 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Trbv14A0A140T8L9 115 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 H1fxQ80ZM5 188 aa11.77□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 A0A1L1SR50 188 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Trav9-1A0A075B601 112 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Klk1b4P00757 256 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Rasl10aQ8K5A4 203 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Ighv8-8A0A0A6YXQ0 119 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Spata46Q4FZF2 204 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Il1f10Q8R459 152 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Cxcl14Q9WUQ5 99 aa11.76□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Gm28038F7BCN9 126 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 OtosQ8R448 89 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Clec5aQ9R007 190 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Rspo1Q9Z132 265 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Kntc1Q8C3Y4 2207 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Col4a5Q63ZW6 1691 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Sfta2E9PXB6 77 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Thap8E9Q695 213 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Runx1Q03347 451 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Ankrd39Q9D2X0 183 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Ighv1-23A0A0A6YVW3 117 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 P01793 123 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Cdk2ap2Q9CPY4 127 aa11.75□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 GhrhP16043 103 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Fam241bQ9D882 120 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Lrrk1Q3UHC2 2014 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 PspnO70300 156 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Gm7489Q3UT34 171 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Olfr317Q5NCD6 327 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Il22ra2Q80XF5 230 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Gm5105Q8C6Y9 112 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Gm8251F6VUT6 1994 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 KprpB2RUR4 657 aa11.74□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Spink10Q8CAC8 162 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Prok2Q9QXU7 128 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Defb3Q9WTL0 63 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Igkv13-84A0A140T8N3 115 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 ApomQ9Z1R3 190 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Plxna2P70207 1894 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Trdv5A0A075B661 115 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Smim20D3Z7Q2 69 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 P0C913 63 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Pygo1Q9D0P5 417 aa11.73□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Igsf23B2RTN2 239 aa11.72□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Ralgapa1Q6GYP7 2035 aa11.72□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Olfr312Q7TRZ9 308 aa11.72□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Igkv4-80A0A075B5L7 116 aa11.71□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 eef1akmt3D3YWP0 232 aa11.71□□□□□ -0.53
Pcdha1-201ENSMUST00000070797 Ighv1-39A0A075B5V5 117 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Fam216aQ9DB54 251 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Fer1l5P0DM40 2038 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm6871L7N248 545 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 LeprotO89013 131 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Prdm6Q3UZD5 596 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Smim26Q3V460 107 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Defa21Q8C1P2 93 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Klk13Q8CGR6 276 aa11.71□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Nup210lQ9D2F7 1881 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Igkv4-90A0A075B5L3 117 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01724 129 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01727 129 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 A530064D06RikQ8BNV8 229 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Tmem14cQ9CQN6 114 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Cryba4Q9JJV0 196 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Iglc1A0A0G2JE99 106 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Defa27F2Z403 93 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm7102J3QQ10 178 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01843 105 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 A730015C16RikQ8C992 119 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01680 129 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 AmelxP63277 210 aa11.7□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 1700067P10RikG3X8U2 183 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01794 123 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Myod1P10085 318 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Cd99Q8VCN6 175 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Urb1Q571H0 2274 aaKnown RBP11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Cep295Q8BQ48 2412 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Trav9d-1A0A075B699 112 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 P01791 123 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Tcl1b4P56844 120 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Gm9936Q8C864 160 aa11.69□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 NpyP57774 97 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Defb33Q30KN3 62 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Tmem88bQ3TYP4 173 aa11.68□□□□□ -0.54
Pcdha1-201ENSMUST00000070797 Q8R092 253 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms