RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Gm4792Q569Q2 183 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Taf15Q8BQ46 557 aaKnown RBP11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 E030025P04RikA2A6V5 185 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tm4sf19E9Q9H8 206 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Rnf5O35445 180 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Klf11Q8K1S5 502 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tex36Q9D5N9 219 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Q9D8L0 127 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm9881Q8BR56 211 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm10203F6QJ09 66 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 KncnQ307W7 124 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Wdr83osQ6ZWX0 106 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Foxi3E0CZH3 425 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv9-124A0A0G2JDR3 117 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 B1ARW8 110 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm4894Q8CA09 118 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Timm23Q9WTQ8 209 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Pax1P09084 446 aa11.46□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Mpv17l2Q8VIK2 200 aa11.46□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Timm10bQ9WV96 100 aa11.46□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ighv1-58A0A075B5W9 117 aa11.46□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Shisa3Q3UPR0 238 aa11.46□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ndufc2Q9CQ54 120 aa11.46□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Spsb3Q571F5 354 aa11.46□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Gvin1Q80SU7 2427 aa11.46□□□□□ -0.58
Col5a1-201ENSMUST00000028280 6430628N08RikA0A0U1RQ45 177 aa11.46□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Spink10Q8CAC8 162 aa11.46□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Rnf183Q8QZS5 190 aa11.46□□□□□ -0.58
Col5a1-201ENSMUST00000028280 ApohQ01339 345 aa11.46□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Defb33Q30KN3 62 aa11.46□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Trbv12-1A0A0B4J1H0 124 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Prss22Q9ER10 306 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 1700031F05RikB1AX30 191 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Wbp2nlQ9D529 359 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Cd5lQ9QWK4 352 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ighv1-34A0A075B5V2 117 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 AgerQ62151 402 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Rita1Q9D1H0 253 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Siglec15A7E1W8 342 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Timm21Q8CCM6 249 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 1700001C19RikQ8K168 210 aa11.45□□□□□ -0.58
Col5a1-201ENSMUST00000028280 C330021F23RikQ8C7T0 141 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Lage3Q9CR70 148 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Lime1Q9EQR5 269 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Pfn2Q9JJV2 140 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Igkv6-13A0A0G2JGY3 119 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Rnf166Q3U9F6 237 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Trdv4Q5R1A3 115 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Brk1Q91VR8 75 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Igkv6-32A0A140T8N9 115 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 P01657 111 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Igkv4-57A0A0A6YYE7 117 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 P04219 140 aa11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Nup210Q9QY81 1886 aaKnown RBP11.44□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ighv1-26A0A075B5V0 117 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ighv8-6A0A0A6YXA3 118 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Wnt2P21552 360 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Vmo1Q5SXG7 201 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 AcanQ61282 2132 aaKnown RBP11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ighv14-1A0A075B5R4 117 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Pcnx3Q8VI59 2028 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 DnlzQ9D113 177 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 CrygbP04344 175 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Crlf1Q9JM58 425 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ighv1-7A0A075B5T7 117 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ighv1-37A0A0A6YW32 117 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 4931422A03RikA2BHN9 113 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Sap30O88574 220 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Usmg5Q78IK2 58 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Chchd5Q9CQP3 110 aa11.43□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Foxl2O88470 375 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Zg16Q8K0C5 167 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 CtsbP10605 339 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Runx1Q03347 451 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ccpg1osV9GXK1 122 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Lynx1P0DP60 116 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Tmem52Q9D702 196 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Foxi1Q922I5 372 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Pate2Q3UW31 111 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Lypd1Q8BLC3 141 aa11.42□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Ndufs7Q9DC70 224 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 ApomQ9Z1R3 190 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 F930015N05RikQ8C3A3 210 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Rasl10aQ8K5A4 203 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Leap2Q91V13 76 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Rpl35aO55142 110 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Igkv8-16A0A0G2JDG9 121 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 P01741 114 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Klhdc3Q8VEM9 382 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Spata25Q9DA57 226 aa11.41□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Reg1P43137 165 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Zfp36l2P23949 484 aaKnown RBP11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Gm10447Q3UQ92 135 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 H1fxQ80ZM5 188 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Card19Q9D1I2 183 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Spaca3Q9D9X8 221 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Myod1P10085 318 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Fam24aQ8CF27 98 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Cxcl14Q9WUQ5 99 aa11.4□□□□□ -0.58
Col5a1-201ENSMUST00000028280 Pate4Q09098 99 aa11.4□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms