RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Med12lQ8BQM9 2157 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 FlnbQ80X90 2602 aaKnown RBP9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm45753A0A1C7CYU8 86 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 PlnP61014 52 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Cks1bP61025 79 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Tmem88bQ3TYP4 173 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 MycbQ6P8Z1 170 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ttc9cQ810A3 171 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Lypd1Q8BLC3 141 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 GaptQ8CB93 157 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Tctex1d1Q9D5I4 173 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 4930412O13RikQ9D5M9 106 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Crybb3Q9JJU9 211 aa9.52□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Abca12E9Q876 2595 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Pcnx1Q9QYC1 2344 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 DysfQ9ESD7 2090 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ash1lQ99MY8 2958 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Trav16d-dv11A0A075B617 117 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Trav16nA0A075B634 117 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ighv1-37A0A0A6YW32 117 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Vmn1r60G3UY47 300 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gng4P50153 75 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 KncnQ307W7 124 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 YrdcQ3U5F4 280 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 QrfpQ8CE23 124 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Rnase2aQ8K196 155 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Hrct1Q9D6B9 109 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Tspan13Q9D8C2 204 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr19Q9JHB2 309 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Akap13E9Q394 2776 aa9.51□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ighv6-7A0A0A6YWU3 119 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ighv1-20A0A0A6YX66 117 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Igkv1-133A0A0B4J1H8 120 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr1192-ps1A0A1L1SRD7 309 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ebi3O35228 228 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm10645Q3UPY1 145 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr311Q5NC59 308 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 AdipoqQ60994 247 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Srsf2Q62093 221 aaKnown RBP9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Tal2Q62282 108 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Eda2rQ8BX35 297 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Scnm1Q8K136 229 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Tmem52Q9D702 196 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Erg28Q9ERY9 140 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Rif1Q6PR54 2419 aaKnown RBP9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Cacna1iE9Q7P2 2199 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Cep250Q60952 2414 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ighv1-7A0A075B5T7 117 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm21983D6RFS9 131 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm26965M0QWH4 86 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Saa3P04918 122 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Pde6hP61249 83 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Timm8bP62077 83 aaKnown RBP9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr1431Q8VF59 312 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Odf3Q920N1 254 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Trappc2lQ9JME7 139 aa9.5□□□□□ -0.89
Ufd1-201ENSMUST00000005394 F5O88783 2183 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm45623A0A1B0GSF6 103 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm17660B9UIU9 90 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr898L7N1Z5 316 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Sap30O88574 220 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Rpl24Q8BP67 157 aaKnown RBP9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Muc15Q8C6Z1 331 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 OtosQ8R448 89 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr1242Q8VGM6 306 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Lyzl1Q9CPX3 148 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Clec5aQ9R007 190 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Itpr3P70227 2670 aa9.49□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm33815A0A087WNV3 176 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gm29644A0A087WPG2 191 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 P01791 123 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Prop1P97458 223 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Defb33Q30KN3 62 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr211Q8VGH2 309 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ppp1r14aQ91VC7 147 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Mcrip2Q9CQB2 160 aaKnown RBP9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ovol1Q9WTJ2 267 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Sptan1P16546 2472 aaKnown RBP9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Ighv9-1A0A0B4J1P3 117 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 NgfP01139 241 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Fgf6P21658 208 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Dynlrb1P62627 96 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Dlx6P70397 175 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Msrb2Q78J03 175 aa9.48□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Hbb-bsA8DUK4 147 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Vsig4F6TUL9 280 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Hbb-b1P02088 147 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Prrx2Q06348 247 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Olfr317Q5NCD6 327 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Fmc1Q9CR13 113 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Slamf6Q9ET39 351 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Rnase4Q9JJH1 148 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 NacaP70670 2187 aaKnown RBP9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Flg2Q2VIS4 2362 aa9.47□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Trav14-2A0A075B694 121 aa9.46□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Trbv26A0A0B4J1P5 115 aa9.46□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Gimap1P70224 277 aa9.46□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Tmem136Q3TYE7 245 aa9.46□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Fxyd3Q61835 88 aa9.46□□□□□ -0.89
Ufd1-201ENSMUST00000005394 Aqp6Q8C4A0 293 aa9.46□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 86.8 ms