RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 GIG44P09565 113 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-247ENST00000637769 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-247ENST00000637769 APCP25054 2843 aa11.41□□□□□ -0.58
CACNA1A-247ENST00000637769 LINC01558Q9Y6Z2 57 aa11.41□□□□□ -0.58
CACNA1A-247ENST00000637769 A0A0G2JQZ4 141 aa11.4□□□□□ -0.58
CACNA1A-247ENST00000637769 PCNTO95613 3336 aa11.38□□□□□ -0.59
CACNA1A-247ENST00000637769 R4GN34 69 aa11.37□□□□□ -0.59
CACNA1A-247ENST00000637769 ZCCHC13Q8WW36 166 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-247ENST00000637769 ASB16-AS1Q495Z4 193 aa11.34□□□□□ -0.59
CACNA1A-247ENST00000637769 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-247ENST00000637769 SPINK7P58062 85 aa11.33□□□□□ -0.6
CACNA1A-247ENST00000637769 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
CACNA1A-247ENST00000637769 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-247ENST00000637769 UTP20O75691 2785 aaKnown RBP11.27□□□□□ -0.6
CACNA1A-247ENST00000637769 ROMO1P60602 79 aa11.27□□□□□ -0.61
CACNA1A-247ENST00000637769 C5orf42Q9H799 3197 aa11.26□□□□□ -0.61
CACNA1A-247ENST00000637769 SEC61BP60468 96 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-247ENST00000637769 NSD1Q96L73 2696 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-247ENST00000637769 RPL37P61927 97 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-247ENST00000637769 IGSF10Q6WRI0 2623 aa11.21□□□□□ -0.62
CACNA1A-247ENST00000637769 KRTAP16-1A8MUX0 517 aa11.2□□□□□ -0.62
CACNA1A-247ENST00000637769 UTRNP46939 3433 aa11.19□□□□□ -0.62
CACNA1A-247ENST00000637769 MMP24-AS1A0A0U1RRL7 71 aa11.18□□□□□ -0.62
CACNA1A-247ENST00000637769 Q5VV11 94 aa11.18□□□□□ -0.62
CACNA1A-247ENST00000637769 A0A096LNT2 108 aa11.17□□□□□ -0.62
CACNA1A-247ENST00000637769 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
CACNA1A-247ENST00000637769 Q5W150 140 aa11.14□□□□□ -0.63
CACNA1A-247ENST00000637769 NBEAL2Q6ZNJ1 2754 aa11.13□□□□□ -0.63
CACNA1A-247ENST00000637769 CASC10Q5T4H9 136 aa11.13□□□□□ -0.63
CACNA1A-247ENST00000637769 Q5XG85 94 aa11.11□□□□□ -0.63
CACNA1A-247ENST00000637769 PLAC4Q8WY50 150 aa11.11□□□□□ -0.63
CACNA1A-247ENST00000637769 A0A0C4DFX4 3053 aa11.1□□□□□ -0.63
CACNA1A-247ENST00000637769 PRAC1Q96KF2 57 aa11.09□□□□□ -0.63
CACNA1A-247ENST00000637769 LINC00472Q9H8W2 130 aa11.09□□□□□ -0.63
CACNA1A-247ENST00000637769 SPRR1AP35321 89 aa11.08□□□□□ -0.64
CACNA1A-247ENST00000637769 H1FX-AS1Q4G0G2 97 aa11.08□□□□□ -0.64
CACNA1A-247ENST00000637769 FP248Q71RG6 208 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-247ENST00000637769 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
CACNA1A-247ENST00000637769 SPRR1BP22528 89 aa11.05□□□□□ -0.64
CACNA1A-247ENST00000637769 ITPR1Q14643 2758 aa11.04□□□□□ -0.64
CACNA1A-247ENST00000637769 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-247ENST00000637769 M0QZ58 72 aa10.99□□□□□ -0.65
CACNA1A-247ENST00000637769 UBR5O95071 2799 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-247ENST00000637769 Q6ZR54 194 aa10.93□□□□□ -0.66
CACNA1A-247ENST00000637769 TRANK1O15050 2925 aa10.92□□□□□ -0.66
CACNA1A-247ENST00000637769 MGAQ8IWI9 3026 aa10.89□□□□□ -0.67
CACNA1A-247ENST00000637769 PANO1I0J062 215 aa10.84□□□□□ -0.67
CACNA1A-247ENST00000637769 OXTP01178 125 aa10.83□□□□□ -0.68
CACNA1A-247ENST00000637769 FRYLO94915 3013 aa10.8□□□□□ -0.68
CACNA1A-247ENST00000637769 KRTAP1-3Q8IUG1 177 aa10.8□□□□□ -0.68
CACNA1A-247ENST00000637769 ADM2Q7Z4H4 148 aa10.8□□□□□ -0.68
CACNA1A-247ENST00000637769 KRTAP26-1Q6PEX3 210 aa10.77□□□□□ -0.69
CACNA1A-247ENST00000637769 DSPP15924 2871 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-247ENST00000637769 Q5VSD8 79 aa10.75□□□□□ -0.69
CACNA1A-247ENST00000637769 FRYQ5TBA9 3013 aa10.74□□□□□ -0.69
CACNA1A-247ENST00000637769 KRTAP1-1Q07627 177 aa10.74□□□□□ -0.69
CACNA1A-247ENST00000637769 SPATA8Q6RVD6 105 aa10.74□□□□□ -0.69
CACNA1A-247ENST00000637769 CYSTM1Q9H1C7 97 aa10.73□□□□□ -0.69
CACNA1A-247ENST00000637769 LRBAP50851 2863 aa10.7□□□□□ -0.7
CACNA1A-247ENST00000637769 XIRP2A4UGR9 3374 aa10.7□□□□□ -0.7
CACNA1A-247ENST00000637769 TRIOO75962 3097 aa10.69□□□□□ -0.7
CACNA1A-247ENST00000637769 VPS13AQ96RL7 3174 aa10.69□□□□□ -0.7
CACNA1A-247ENST00000637769 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-247ENST00000637769 Q8NDZ9 215 aa10.66□□□□□ -0.7
CACNA1A-247ENST00000637769 FLNCQ14315 2725 aa10.64□□□□□ -0.71
CACNA1A-247ENST00000637769 KRTAP25-1Q3LHN0 102 aa10.63□□□□□ -0.71
CACNA1A-247ENST00000637769 C20orf166-AS1Q96NR2 134 aa10.62□□□□□ -0.71
CACNA1A-247ENST00000637769 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
CACNA1A-247ENST00000637769 REV3LO60673 3130 aa10.58□□□□□ -0.72
CACNA1A-247ENST00000637769 A0A087X002 238 aa10.57□□□□□ -0.72
CACNA1A-247ENST00000637769 KALRNO60229 2985 aa10.56□□□□□ -0.72
CACNA1A-247ENST00000637769 TENM1Q9UKZ4 2725 aa10.56□□□□□ -0.72
CACNA1A-247ENST00000637769 ASH1LQ9NR48 2969 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-247ENST00000637769 NF1P21359 2839 aa10.54□□□□□ -0.72
CACNA1A-247ENST00000637769 KRTAP29-1A8MX34 341 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-247ENST00000637769 CHD7Q9P2D1 2997 aa10.52□□□□□ -0.73
CACNA1A-247ENST00000637769 A8MUU9 505 aa10.51□□□□□ -0.73
CACNA1A-247ENST00000637769 FREM2Q5SZK8 3169 aa10.5□□□□□ -0.73
CACNA1A-247ENST00000637769 WDFY4Q6ZS81 3184 aa10.5□□□□□ -0.73
CACNA1A-247ENST00000637769 NDUFAF8A1L188 74 aa10.5□□□□□ -0.73
CACNA1A-247ENST00000637769 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-247ENST00000637769 LCE6AA0A183 80 aa10.49□□□□□ -0.73
CACNA1A-247ENST00000637769 HIVEP1P15822 2718 aa10.49□□□□□ -0.73
CACNA1A-247ENST00000637769 TENM3Q9P273 2699 aa10.47□□□□□ -0.73
CACNA1A-247ENST00000637769 PRUNE2Q8WUY3 3088 aa10.45□□□□□ -0.74
CACNA1A-247ENST00000637769 A6NN06 94 aa10.44□□□□□ -0.74
CACNA1A-247ENST00000637769 TNP1P09430 55 aa10.43□□□□□ -0.74
CACNA1A-247ENST00000637769 KRTAP10-1P60331 282 aa10.43□□□□□ -0.74
CACNA1A-247ENST00000637769 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
CACNA1A-247ENST00000637769 PP632Q6XCG6 107 aa10.4□□□□□ -0.74
CACNA1A-247ENST00000637769 CELSR3Q9NYQ7 3312 aa10.39□□□□□ -0.75
CACNA1A-247ENST00000637769 NIPBLQ6KC79 2804 aaeCLIP10.38□□□□□ -0.75
CACNA1A-247ENST00000637769 CRYBG3Q68DQ2 2970 aa10.38□□□□□ -0.75
CACNA1A-247ENST00000637769 CELSR2Q9HCU4 2923 aa10.36□□□□□ -0.75
CACNA1A-247ENST00000637769 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
CACNA1A-247ENST00000637769 RANBP2P49792 3224 aaKnown RBP10.34□□□□□ -0.75
CACNA1A-247ENST00000637769 DMXL2Q8TDJ6 3036 aa10.34□□□□□ -0.75
CACNA1A-247ENST00000637769 KRTAP10-2P60368 255 aa10.32□□□□□ -0.76
CACNA1A-247ENST00000637769 MKI67P46013 3256 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-247ENST00000637769 NOTCH2NLQ7Z3S9 236 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms