RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 KRTAP4-16G5E9R7 235 aaPredicted RBP5.3□□□□□ -1.56
PCDH15-233ENST00000621708 LINC00472Q9H8W2 130 aa5.3□□□□□ -1.56
PCDH15-233ENST00000621708 MMP24-AS1A0A0U1RRL7 71 aa5.29□□□□□ -1.56
PCDH15-233ENST00000621708 COL6A5A8TX70 2615 aa5.29□□□□□ -1.56
PCDH15-233ENST00000621708 TEP1Q99973 2627 aaKnown RBP5.29□□□□□ -1.56
PCDH15-233ENST00000621708 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
PCDH15-233ENST00000621708 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
PCDH15-233ENST00000621708 TEX15Q9BXT5 2789 aa5.27□□□□□ -1.57
PCDH15-233ENST00000621708 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
PCDH15-233ENST00000621708 PRUNE2Q8WUY3 3088 aa5.26□□□□□ -1.57
PCDH15-233ENST00000621708 CHD6Q8TD26 2715 aa5.26□□□□□ -1.57
PCDH15-233ENST00000621708 SETXQ7Z333 2677 aaKnown RBP5.26□□□□□ -1.57
PCDH15-233ENST00000621708 WDFY4Q6ZS81 3184 aa5.25□□□□□ -1.57
PCDH15-233ENST00000621708 STAB1Q9NY15 2570 aa5.24□□□□□ -1.57
PCDH15-233ENST00000621708 C4orf26Q17RF5 130 aa5.23□□□□□ -1.57
PCDH15-233ENST00000621708 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
PCDH15-233ENST00000621708 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
PCDH15-233ENST00000621708 ITPR2Q14571 2701 aa5.22□□□□□ -1.57
PCDH15-233ENST00000621708 PANO1I0J062 215 aa5.21□□□□□ -1.58
PCDH15-233ENST00000621708 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
PCDH15-233ENST00000621708 OXTP01178 125 aa5.21□□□□□ -1.58
PCDH15-233ENST00000621708 Q8N1X5 172 aa5.21□□□□□ -1.58
PCDH15-233ENST00000621708 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
PCDH15-233ENST00000621708 HRES1P13985 223 aa5.2□□□□□ -1.58
PCDH15-233ENST00000621708 TRIOO75962 3097 aa5.19□□□□□ -1.58
PCDH15-233ENST00000621708 CDH23Q9H251 3354 aa5.19□□□□□ -1.58
PCDH15-233ENST00000621708 GCN1Q92616 2671 aaKnown RBP5.19□□□□□ -1.58
PCDH15-233ENST00000621708 FLNCQ14315 2725 aa5.18□□□□□ -1.58
PCDH15-233ENST00000621708 Q5W150 140 aa5.17□□□□□ -1.58
PCDH15-233ENST00000621708 UNC80Q8N2C7 3258 aa5.16□□□□□ -1.58
PCDH15-233ENST00000621708 CFAP54Q96N23 3096 aa5.16□□□□□ -1.58
PCDH15-233ENST00000621708 NSD1Q96L73 2696 aaPredicted RBP5.15□□□□□ -1.58
PCDH15-233ENST00000621708 NOTCH1P46531 2555 aa5.15□□□□□ -1.59
PCDH15-233ENST00000621708 UBR5O95071 2799 aaPredicted RBP5.14□□□□□ -1.59
PCDH15-233ENST00000621708 Q1T7F1 81 aa5.14□□□□□ -1.59
PCDH15-233ENST00000621708 Q5XG85 94 aa5.14□□□□□ -1.59
PCDH15-233ENST00000621708 LAMA2P24043 3122 aaKnown RBP5.13□□□□□ -1.59
PCDH15-233ENST00000621708 A0A0C4DFX4 3053 aa5.13□□□□□ -1.59
PCDH15-233ENST00000621708 KRTAP13-1Q8IUC0 172 aa5.13□□□□□ -1.59
PCDH15-233ENST00000621708 SZT2Q5T011 3432 aa5.13□□□□□ -1.59
PCDH15-233ENST00000621708 SPINK7P58062 85 aa5.13□□□□□ -1.59
PCDH15-233ENST00000621708 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
PCDH15-233ENST00000621708 HIVEP1P15822 2718 aa5.12□□□□□ -1.59
PCDH15-233ENST00000621708 VPS13AQ96RL7 3174 aa5.11□□□□□ -1.59
PCDH15-233ENST00000621708 S4R3F8 94 aa5.11□□□□□ -1.59
PCDH15-233ENST00000621708 KRTAP7-1Q8IUC3 87 aa5.11□□□□□ -1.59
PCDH15-233ENST00000621708 A0A087X002 238 aa5.11□□□□□ -1.59
PCDH15-233ENST00000621708 Q8N9P0 234 aaPredicted RBP5.11□□□□□ -1.59
PCDH15-233ENST00000621708 ITPR1Q14643 2758 aa5.11□□□□□ -1.59
PCDH15-233ENST00000621708 UTP20O75691 2785 aaKnown RBP5.1□□□□□ -1.59
PCDH15-233ENST00000621708 APCP25054 2843 aa5.1□□□□□ -1.59
PCDH15-233ENST00000621708 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
PCDH15-233ENST00000621708 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.59
PCDH15-233ENST00000621708 CRIPTQ9P021 101 aa5.08□□□□□ -1.6
PCDH15-233ENST00000621708 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
PCDH15-233ENST00000621708 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
PCDH15-233ENST00000621708 USP34Q70CQ2 3546 aa5.08□□□□□ -1.6
PCDH15-233ENST00000621708 A0A1B0GU33 70 aa5.06□□□□□ -1.6
PCDH15-233ENST00000621708 FRYQ5TBA9 3013 aa5.06□□□□□ -1.6
PCDH15-233ENST00000621708 Q75L30 129 aa5.06□□□□□ -1.6
PCDH15-233ENST00000621708 XIRP2A4UGR9 3374 aa5.05□□□□□ -1.6
PCDH15-233ENST00000621708 MAP1AP78559 2803 aaPredicted RBP5.05□□□□□ -1.6
PCDH15-233ENST00000621708 EYSQ5T1H1 3165 aa5.05□□□□□ -1.6
PCDH15-233ENST00000621708 M0R2T5 61 aa5.05□□□□□ -1.6
PCDH15-233ENST00000621708 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
PCDH15-233ENST00000621708 ATMQ13315 3056 aa5.04□□□□□ -1.6
PCDH15-233ENST00000621708 DMXL2Q8TDJ6 3036 aa5.03□□□□□ -1.6
PCDH15-233ENST00000621708 LAMA1P25391 3075 aa5.03□□□□□ -1.6
PCDH15-233ENST00000621708 NBEAL1Q6ZS30 2694 aa5.02□□□□□ -1.61
PCDH15-233ENST00000621708 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
PCDH15-233ENST00000621708 FRYLO94915 3013 aa5.02□□□□□ -1.61
PCDH15-233ENST00000621708 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
PCDH15-233ENST00000621708 LINC01554Q52M75 96 aa5.02□□□□□ -1.61
PCDH15-233ENST00000621708 NBEAL2Q6ZNJ1 2754 aa5.01□□□□□ -1.61
PCDH15-233ENST00000621708 A0A0D9SG42 100 aa5□□□□□ -1.61
PCDH15-233ENST00000621708 COL12A1Q99715 3063 aa5□□□□□ -1.61
PCDH15-233ENST00000621708 COL6A3P12111 3177 aa4.97□□□□□ -1.61
PCDH15-233ENST00000621708 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
PCDH15-233ENST00000621708 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
PCDH15-233ENST00000621708 NIPBLQ6KC79 2804 aaeCLIP4.95□□□□□ -1.62
PCDH15-233ENST00000621708 SPTBN5Q9NRC6 3674 aaKnown RBP4.95□□□□□ -1.62
PCDH15-233ENST00000621708 HRNRQ86YZ3 2850 aaPredicted RBP4.95□□□□□ -1.62
PCDH15-233ENST00000621708 ADGRG4Q8IZF6 3080 aa4.95□□□□□ -1.62
PCDH15-233ENST00000621708 LRBAP50851 2863 aa4.95□□□□□ -1.62
PCDH15-233ENST00000621708 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
PCDH15-233ENST00000621708 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
PCDH15-233ENST00000621708 R4GN34 69 aa4.93□□□□□ -1.62
PCDH15-233ENST00000621708 NOTCH2NLQ7Z3S9 236 aa4.93□□□□□ -1.62
PCDH15-233ENST00000621708 VCANP13611 3396 aa4.93□□□□□ -1.62
PCDH15-233ENST00000621708 LCA10Q71F78 164 aa4.92□□□□□ -1.62
PCDH15-233ENST00000621708 DMXL1Q9Y485 3027 aa4.92□□□□□ -1.62
PCDH15-233ENST00000621708 TENM4Q6N022 2769 aa4.92□□□□□ -1.62
PCDH15-233ENST00000621708 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
PCDH15-233ENST00000621708 NBEAQ8NFP9 2946 aa4.92□□□□□ -1.62
PCDH15-233ENST00000621708 REV3LO60673 3130 aa4.91□□□□□ -1.62
PCDH15-233ENST00000621708 BOD1L1Q8NFC6 3051 aa4.9□□□□□ -1.62
PCDH15-233ENST00000621708 Q5VV11 94 aa4.89□□□□□ -1.63
PCDH15-233ENST00000621708 A8MUU9 505 aa4.88□□□□□ -1.63
PCDH15-233ENST00000621708 TACC2O95359 2948 aa4.88□□□□□ -1.63
PCDH15-233ENST00000621708 ZZEF1O43149 2961 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms