RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
VRK3-210ENST00000596121 Q6ZQY7 126 aa6.26□□□□□ -1.41
VRK3-210ENST00000596121 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
VRK3-210ENST00000596121 FAM218AQ96MZ4 157 aa6.26□□□□□ -1.41
VRK3-210ENST00000596121 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
VRK3-210ENST00000596121 SLC25A20O43772 301 aa6.25□□□□□ -1.41
VRK3-210ENST00000596121 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
VRK3-210ENST00000596121 FP248Q71RG6 208 aaPredicted RBP6.25□□□□□ -1.41
VRK3-210ENST00000596121 KRTAP13-3Q3SY46 172 aa6.24□□□□□ -1.41
VRK3-210ENST00000596121 PRO1854Q9UHT4 67 aa6.24□□□□□ -1.41
VRK3-210ENST00000596121 K7ERJ3 54 aa6.23□□□□□ -1.41
VRK3-210ENST00000596121 MUC2Q02817 5179 aa6.23□□□□□ -1.41
VRK3-210ENST00000596121 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.22□□□□□ -1.41
VRK3-210ENST00000596121 CD164Q04900 197 aa6.21□□□□□ -1.42
VRK3-210ENST00000596121 TRIAP1O43715 76 aa6.2□□□□□ -1.42
VRK3-210ENST00000596121 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
VRK3-210ENST00000596121 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
VRK3-210ENST00000596121 TMEM238LA0A1B0GVL6 79 aa6.19□□□□□ -1.42
VRK3-210ENST00000596121 A6NJY4 79 aa6.19□□□□□ -1.42
VRK3-210ENST00000596121 H0YGX0 51 aa6.19□□□□□ -1.42
VRK3-210ENST00000596121 BATFQ16520 125 aa6.18□□□□□ -1.42
VRK3-210ENST00000596121 OCIAD2Q56VL3 154 aa6.18□□□□□ -1.42
VRK3-210ENST00000596121 Q5XG85 94 aa6.17□□□□□ -1.42
VRK3-210ENST00000596121 IGFL1Q6UW32 110 aa6.17□□□□□ -1.42
VRK3-210ENST00000596121 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
VRK3-210ENST00000596121 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
VRK3-210ENST00000596121 H3BUT2 72 aa6.16□□□□□ -1.42
VRK3-210ENST00000596121 TAX1BP3O14907 124 aa6.16□□□□□ -1.42
VRK3-210ENST00000596121 C1orf195Q5TG92 126 aa6.16□□□□□ -1.42
VRK3-210ENST00000596121 F8WEM9 126 aa6.15□□□□□ -1.42
VRK3-210ENST00000596121 PPDPFLQ8WWR9 84 aa6.15□□□□□ -1.42
VRK3-210ENST00000596121 C9orf118A6NHY6 69 aa6.14□□□□□ -1.43
VRK3-210ENST00000596121 A0A1B0GX51 115 aa6.13□□□□□ -1.43
VRK3-210ENST00000596121 Q6JHZ5 121 aa6.13□□□□□ -1.43
VRK3-210ENST00000596121 PSMB2P49721 201 aa6.12□□□□□ -1.43
VRK3-210ENST00000596121 NDUFV3P56181 108 aaKnown RBP6.12□□□□□ -1.43
VRK3-210ENST00000596121 XP32Q5T750 250 aa6.12□□□□□ -1.43
VRK3-210ENST00000596121 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
VRK3-210ENST00000596121 TRBV7-7A0A0K0K1E9 115 aa6.11□□□□□ -1.43
VRK3-210ENST00000596121 A0A1B0GV90 55 aa6.11□□□□□ -1.43
VRK3-210ENST00000596121 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
VRK3-210ENST00000596121 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
VRK3-210ENST00000596121 SNCGO76070 127 aa6.1□□□□□ -1.43
VRK3-210ENST00000596121 FABP2P12104 132 aa6.09□□□□□ -1.43
VRK3-210ENST00000596121 ASB16-AS1Q495Z4 193 aa6.09□□□□□ -1.43
VRK3-210ENST00000596121 TCL1BO95988 128 aa6.08□□□□□ -1.44
VRK3-210ENST00000596121 A0A1W2PPM0 123 aa6.07□□□□□ -1.44
VRK3-210ENST00000596121 H3BMG7 143 aa6.07□□□□□ -1.44
VRK3-210ENST00000596121 COX6CP09669 75 aa6.07□□□□□ -1.44
VRK3-210ENST00000596121 UBE2V1Q13404 147 aa6.06□□□□□ -1.44
VRK3-210ENST00000596121 Q6Q795 121 aa6.06□□□□□ -1.44
VRK3-210ENST00000596121 NAA38Q9BRA0 125 aaKnown RBP6.06□□□□□ -1.44
VRK3-210ENST00000596121 ORMDL1Q9P0S3 153 aa6.06□□□□□ -1.44
VRK3-210ENST00000596121 A0A1W2PNM2 257 aa6.05□□□□□ -1.44
VRK3-210ENST00000596121 LST1O00453 97 aa6.05□□□□□ -1.44
VRK3-210ENST00000596121 GTF2H5Q6ZYL4 71 aa6.05□□□□□ -1.44
VRK3-210ENST00000596121 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
VRK3-210ENST00000596121 TRBV20-1A0A075B6N2 111 aa6.04□□□□□ -1.44
VRK3-210ENST00000596121 A0A1B0GV72 72 aa6.04□□□□□ -1.44
VRK3-210ENST00000596121 DNAL4O96015 105 aa6.04□□□□□ -1.44
VRK3-210ENST00000596121 TRACP01848 142 aa6.04□□□□□ -1.44
VRK3-210ENST00000596121 SCGB1C2P0DMR2 95 aa6.04□□□□□ -1.44
VRK3-210ENST00000596121 LYRM7Q5U5X0 104 aa6.04□□□□□ -1.44
VRK3-210ENST00000596121 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
VRK3-210ENST00000596121 TEN1Q86WV5 123 aa6.03□□□□□ -1.44
VRK3-210ENST00000596121 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
VRK3-210ENST00000596121 K7EP34 96 aa6.02□□□□□ -1.45
VRK3-210ENST00000596121 GHRHP01286 108 aa6.02□□□□□ -1.45
VRK3-210ENST00000596121 A0A087WSZ3 146 aa6.01□□□□□ -1.45
VRK3-210ENST00000596121 TMEM256-PLSCR3K7ERE1 68 aa6.01□□□□□ -1.45
VRK3-210ENST00000596121 SPCS1Q9Y6A9 102 aa6.01□□□□□ -1.45
VRK3-210ENST00000596121 H3BQ85 93 aa6□□□□□ -1.45
VRK3-210ENST00000596121 PCOTHQ58A44 107 aa6□□□□□ -1.45
VRK3-210ENST00000596121 ANKRD29Q8N6D5 301 aa6□□□□□ -1.45
VRK3-210ENST00000596121 Q96NJ1 140 aa6□□□□□ -1.45
VRK3-210ENST00000596121 F8W1H4 67 aa5.98□□□□□ -1.45
VRK3-210ENST00000596121 BAALC-AS2P0C853 105 aa5.98□□□□□ -1.45
VRK3-210ENST00000596121 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
VRK3-210ENST00000596121 TRBV7-4A0A0J9YYF1 115 aa5.96□□□□□ -1.46
VRK3-210ENST00000596121 RPL37P61927 97 aaKnown RBP5.96□□□□□ -1.46
VRK3-210ENST00000596121 SS18L2Q9UHA2 77 aa5.96□□□□□ -1.46
VRK3-210ENST00000596121 ATXN8Q156A1 80 aa5.95□□□□□ -1.46
VRK3-210ENST00000596121 OBSCN-AS1Q96MR7 158 aa5.95□□□□□ -1.46
VRK3-210ENST00000596121 A0A0U1RQV1 116 aa5.94□□□□□ -1.46
VRK3-210ENST00000596121 CCKP06307 115 aa5.94□□□□□ -1.46
VRK3-210ENST00000596121 RBM3P98179 157 aaKnown RBP5.93□□□□□ -1.46
VRK3-210ENST00000596121 KRTAP19-2Q3LHN2 52 aa5.93□□□□□ -1.46
VRK3-210ENST00000596121 PRO0461Q9UI25 63 aa5.93□□□□□ -1.46
VRK3-210ENST00000596121 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
VRK3-210ENST00000596121 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
VRK3-210ENST00000596121 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
VRK3-210ENST00000596121 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
VRK3-210ENST00000596121 C9JAW5 83 aa5.89□□□□□ -1.47
VRK3-210ENST00000596121 DSCR10P59022 87 aa5.89□□□□□ -1.47
VRK3-210ENST00000596121 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
VRK3-210ENST00000596121 DSCR8Q96T75 97 aa5.89□□□□□ -1.47
VRK3-210ENST00000596121 H3BT86 120 aa5.88□□□□□ -1.47
VRK3-210ENST00000596121 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
VRK3-210ENST00000596121 SMCPP49901 116 aaPredicted RBP5.88□□□□□ -1.47
VRK3-210ENST00000596121 Q75L30 129 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms