RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 F8WEM9 126 aa14.71□□□□□ -0.05
TRIM28-204ENST00000594806 K7ERJ3 54 aa14.71□□□□□ -0.05
TRIM28-204ENST00000594806 CD164Q04900 197 aa14.71□□□□□ -0.05
TRIM28-204ENST00000594806 TSTD3H0UI37 97 aa14.7□□□□□ -0.06
TRIM28-204ENST00000594806 M0R143 59 aa14.7□□□□□ -0.06
TRIM28-204ENST00000594806 TRIAP1O43715 76 aa14.7□□□□□ -0.06
TRIM28-204ENST00000594806 GHRHP01286 108 aa14.7□□□□□ -0.06
TRIM28-204ENST00000594806 COX6CP09669 75 aa14.7□□□□□ -0.06
TRIM28-204ENST00000594806 RETNLBQ9BQ08 111 aa14.7□□□□□ -0.06
TRIM28-204ENST00000594806 PSMB2P49721 201 aa14.68□□□□□ -0.06
TRIM28-204ENST00000594806 FP248Q71RG6 208 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-204ENST00000594806 FAM218AQ96MZ4 157 aa14.68□□□□□ -0.06
TRIM28-204ENST00000594806 SNHG12Q9BXW3 62 aa14.65□□□□□ -0.06
TRIM28-204ENST00000594806 LIMD2Q9BT23 127 aa14.64□□□□□ -0.07
TRIM28-204ENST00000594806 IGLV7-46A0A075B6I9 117 aa14.63□□□□□ -0.07
TRIM28-204ENST00000594806 IGLV8-61A0A075B6I0 122 aa14.62□□□□□ -0.07
TRIM28-204ENST00000594806 Q6JHZ5 121 aa14.62□□□□□ -0.07
TRIM28-204ENST00000594806 LRP2P98164 4655 aa14.62□□□□□ -0.07
TRIM28-204ENST00000594806 HRCT1Q6UXD1 115 aa14.59□□□□□ -0.07
TRIM28-204ENST00000594806 CLEC2BQ92478 149 aa14.58□□□□□ -0.08
TRIM28-204ENST00000594806 H3BQ85 93 aa14.57□□□□□ -0.08
TRIM28-204ENST00000594806 DNAL4O96015 105 aa14.57□□□□□ -0.08
TRIM28-204ENST00000594806 TPRXLQ17RH7 258 aa14.57□□□□□ -0.08
TRIM28-204ENST00000594806 Q5XG85 94 aa14.56□□□□□ -0.08
TRIM28-204ENST00000594806 SCGB1C2P0DMR2 95 aa14.53□□□□□ -0.08
TRIM28-204ENST00000594806 NDUFV3P56181 108 aaKnown RBP14.52□□□□□ -0.09
TRIM28-204ENST00000594806 LPAP08519 4548 aa14.52□□□□□ -0.09
TRIM28-204ENST00000594806 ORMDL1Q9P0S3 153 aa14.51□□□□□ -0.09
TRIM28-204ENST00000594806 A0A0G2JQZ4 141 aa14.5□□□□□ -0.09
TRIM28-204ENST00000594806 IGFL1Q6UW32 110 aa14.5□□□□□ -0.09
TRIM28-204ENST00000594806 TRACP01848 142 aa14.49□□□□□ -0.09
TRIM28-204ENST00000594806 FABP2P12104 132 aa14.48□□□□□ -0.09
TRIM28-204ENST00000594806 TMEM256-PLSCR3K7ERE1 68 aa14.46□□□□□ -0.09
TRIM28-204ENST00000594806 LST1O00453 97 aa14.45□□□□□ -0.1
TRIM28-204ENST00000594806 TCL1BO95988 128 aa14.45□□□□□ -0.1
TRIM28-204ENST00000594806 CDIP1Q9H305 208 aa14.45□□□□□ -0.1
TRIM28-204ENST00000594806 UBR4Q5T4S7 5183 aa14.43□□□□□ -0.1
TRIM28-204ENST00000594806 H3BUT2 72 aa14.43□□□□□ -0.1
TRIM28-204ENST00000594806 H3BMG7 143 aa14.42□□□□□ -0.1
TRIM28-204ENST00000594806 TRBV7-7A0A0K0K1E9 115 aa14.41□□□□□ -0.1
TRIM28-204ENST00000594806 KRTAP13-3Q3SY46 172 aa14.41□□□□□ -0.1
TRIM28-204ENST00000594806 BATFQ16520 125 aa14.39□□□□□ -0.11
TRIM28-204ENST00000594806 Q6Q795 121 aa14.39□□□□□ -0.11
TRIM28-204ENST00000594806 UBE2V1Q13404 147 aa14.37□□□□□ -0.11
TRIM28-204ENST00000594806 LYRM7Q5U5X0 104 aa14.37□□□□□ -0.11
TRIM28-204ENST00000594806 ASB16-AS1Q495Z4 193 aa14.36□□□□□ -0.11
TRIM28-204ENST00000594806 C1orf195Q5TG92 126 aa14.35□□□□□ -0.11
TRIM28-204ENST00000594806 TEN1Q86WV5 123 aa14.35□□□□□ -0.11
TRIM28-204ENST00000594806 ATXN8Q156A1 80 aa14.34□□□□□ -0.11
TRIM28-204ENST00000594806 NAA38Q9BRA0 125 aaKnown RBP14.32□□□□□ -0.12
TRIM28-204ENST00000594806 ANKRD29Q8N6D5 301 aa14.29□□□□□ -0.12
TRIM28-204ENST00000594806 SS18L2Q9UHA2 77 aa14.29□□□□□ -0.12
TRIM28-204ENST00000594806 TRBV20-1A0A075B6N2 111 aa14.28□□□□□ -0.12
TRIM28-204ENST00000594806 BAALC-AS2P0C853 105 aa14.28□□□□□ -0.12
TRIM28-204ENST00000594806 C9orf118A6NHY6 69 aa14.25□□□□□ -0.13
TRIM28-204ENST00000594806 TAX1BP3O14907 124 aa14.21□□□□□ -0.13
TRIM28-204ENST00000594806 RBM3P98179 157 aaKnown RBP14.21□□□□□ -0.13
TRIM28-204ENST00000594806 TRBV7-4A0A0J9YYF1 115 aa14.2□□□□□ -0.14
TRIM28-204ENST00000594806 A0A1W2PNM2 257 aa14.2□□□□□ -0.14
TRIM28-204ENST00000594806 A0A087WSZ3 146 aa14.18□□□□□ -0.14
TRIM28-204ENST00000594806 A0A1B0GV72 72 aa14.17□□□□□ -0.14
TRIM28-204ENST00000594806 XP32Q5T750 250 aa14.17□□□□□ -0.14
TRIM28-204ENST00000594806 DSCR8Q96T75 97 aa14.16□□□□□ -0.14
TRIM28-204ENST00000594806 A0A1W2PPM0 123 aa14.15□□□□□ -0.14
TRIM28-204ENST00000594806 CCKP06307 115 aa14.14□□□□□ -0.15
TRIM28-204ENST00000594806 JMJD7-PLA2G4BH0Y9G9 81 aa14.13□□□□□ -0.15
TRIM28-204ENST00000594806 SEC61BP60468 96 aaKnown RBP14.12□□□□□ -0.15
TRIM28-204ENST00000594806 C9orf92A6NGG3 77 aa14.11□□□□□ -0.15
TRIM28-204ENST00000594806 COL5A1-AS1Q5SY13 56 aa14.1□□□□□ -0.15
TRIM28-204ENST00000594806 C9JAW5 83 aa14.09□□□□□ -0.15
TRIM28-204ENST00000594806 RNF213Q63HN8 5207 aa14.08□□□□□ -0.16
TRIM28-204ENST00000594806 MUC17Q685J3 4493 aa14.07□□□□□ -0.16
TRIM28-204ENST00000594806 C21orf62-AS1Q17RA5 79 aa14.07□□□□□ -0.16
TRIM28-204ENST00000594806 PDE6GP18545 87 aa14.04□□□□□ -0.16
TRIM28-204ENST00000594806 H3BT86 120 aa14.03□□□□□ -0.16
TRIM28-204ENST00000594806 Q96NJ1 140 aa14.03□□□□□ -0.16
TRIM28-204ENST00000594806 VPS25Q9BRG1 176 aa14.02□□□□□ -0.17
TRIM28-204ENST00000594806 LOC110117498A0A087WWA1 95 aa14□□□□□ -0.17
TRIM28-204ENST00000594806 A0A1B0GW54 56 aa13.99□□□□□ -0.17
TRIM28-204ENST00000594806 OBSCN-AS1Q96MR7 158 aa13.99□□□□□ -0.17
TRIM28-204ENST00000594806 SPCS1Q9Y6A9 102 aa13.99□□□□□ -0.17
TRIM28-204ENST00000594806 Q6ZQT0 140 aa13.97□□□□□ -0.17
TRIM28-204ENST00000594806 PCP4L1A6NKN8 68 aa13.96□□□□□ -0.17
TRIM28-204ENST00000594806 A0A0U1RQV1 116 aa13.94□□□□□ -0.18
TRIM28-204ENST00000594806 LINC00472Q9H8W2 130 aa13.94□□□□□ -0.18
TRIM28-204ENST00000594806 C14orf132Q9NPU4 83 aa13.92□□□□□ -0.18
TRIM28-204ENST00000594806 IGKV4-1P06312 121 aa13.91□□□□□ -0.18
TRIM28-204ENST00000594806 RPL37P61927 97 aaKnown RBP13.9□□□□□ -0.18
TRIM28-204ENST00000594806 SIGMAR1Q99720 223 aa13.9□□□□□ -0.18
TRIM28-204ENST00000594806 MTURNQ8N3F0 131 aa13.87□□□□□ -0.19
TRIM28-204ENST00000594806 MUC2Q02817 5179 aa13.86□□□□□ -0.19
TRIM28-204ENST00000594806 PCOTHQ58A44 107 aa13.85□□□□□ -0.19
TRIM28-204ENST00000594806 K7EP34 96 aa13.84□□□□□ -0.19
TRIM28-204ENST00000594806 J3KT08 172 aa13.83□□□□□ -0.2
TRIM28-204ENST00000594806 Q75L30 129 aa13.82□□□□□ -0.2
TRIM28-204ENST00000594806 DEFB116Q30KQ4 102 aa13.81□□□□□ -0.2
TRIM28-204ENST00000594806 LINC00313P59037 77 aa13.78□□□□□ -0.2
TRIM28-204ENST00000594806 GTF2H5Q6ZYL4 71 aa13.78□□□□□ -0.2
TRIM28-204ENST00000594806 KRTAP4-1Q9BYQ7 146 aa13.78□□□□□ -0.2
TRIM28-204ENST00000594806 SMCPP49901 116 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms