RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 A0A1B0GVX0 72 aa3.97□□□□□ -1.77
SMAD4-212ENST00000591126 CCDC179H3BU77 68 aa3.97□□□□□ -1.77
SMAD4-212ENST00000591126 PRR26Q8N8Z3 221 aa3.96□□□□□ -1.78
SMAD4-212ENST00000591126 M0R2T5 61 aa3.96□□□□□ -1.78
SMAD4-212ENST00000591126 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-212ENST00000591126 SMG1Q96Q15 3661 aaKnown RBP3.95□□□□□ -1.78
SMAD4-212ENST00000591126 RELNP78509 3460 aa3.95□□□□□ -1.78
SMAD4-212ENST00000591126 MGAM2Q2M2H8 2515 aa3.95□□□□□ -1.78
SMAD4-212ENST00000591126 KRTAP10-1P60331 282 aa3.95□□□□□ -1.78
SMAD4-212ENST00000591126 C1orf64Q8NEQ6 169 aa3.94□□□□□ -1.78
SMAD4-212ENST00000591126 UTP20O75691 2785 aaKnown RBP3.94□□□□□ -1.78
SMAD4-212ENST00000591126 CRYBG3Q68DQ2 2970 aa3.94□□□□□ -1.78
SMAD4-212ENST00000591126 TACC2O95359 2948 aa3.94□□□□□ -1.78
SMAD4-212ENST00000591126 IGFL1Q6UW32 110 aa3.94□□□□□ -1.78
SMAD4-212ENST00000591126 C8orf17Q9NRJ1 99 aa3.93□□□□□ -1.78
SMAD4-212ENST00000591126 MT-ATP8P03928 68 aa3.93□□□□□ -1.78
SMAD4-212ENST00000591126 SPRR1BP22528 89 aa3.93□□□□□ -1.78
SMAD4-212ENST00000591126 Q6ZQT0 140 aa3.93□□□□□ -1.78
SMAD4-212ENST00000591126 SOSTDC1Q6X4U4 206 aa3.93□□□□□ -1.78
SMAD4-212ENST00000591126 ZFHX4Q86UP3 3567 aa3.93□□□□□ -1.78
SMAD4-212ENST00000591126 UBR5O95071 2799 aaPredicted RBP3.93□□□□□ -1.78
SMAD4-212ENST00000591126 LINC00310P59036 64 aa3.92□□□□□ -1.78
SMAD4-212ENST00000591126 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
SMAD4-212ENST00000591126 ATRQ13535 2644 aa3.92□□□□□ -1.78
SMAD4-212ENST00000591126 PRR15Q8IV56 129 aa3.92□□□□□ -1.78
SMAD4-212ENST00000591126 IGLV5-48A0A075B6I7 105 aa3.91□□□□□ -1.78
SMAD4-212ENST00000591126 RETNLBQ9BQ08 111 aa3.91□□□□□ -1.78
SMAD4-212ENST00000591126 TEX15Q9BXT5 2789 aa3.91□□□□□ -1.78
SMAD4-212ENST00000591126 A8MUN3 132 aa3.91□□□□□ -1.78
SMAD4-212ENST00000591126 HRES1P13985 223 aa3.9□□□□□ -1.78
SMAD4-212ENST00000591126 CELSR2Q9HCU4 2923 aa3.9□□□□□ -1.78
SMAD4-212ENST00000591126 C9orf92A6NGG3 77 aa3.9□□□□□ -1.79
SMAD4-212ENST00000591126 LITAFQ99732 161 aa3.9□□□□□ -1.79
SMAD4-212ENST00000591126 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
SMAD4-212ENST00000591126 Q8N377 158 aa3.89□□□□□ -1.79
SMAD4-212ENST00000591126 TENM4Q6N022 2769 aa3.89□□□□□ -1.79
SMAD4-212ENST00000591126 SPRR1AP35321 89 aa3.89□□□□□ -1.79
SMAD4-212ENST00000591126 ASH1LQ9NR48 2969 aaKnown RBP3.89□□□□□ -1.79
SMAD4-212ENST00000591126 DSCR10P59022 87 aa3.88□□□□□ -1.79
SMAD4-212ENST00000591126 DEFB116Q30KQ4 102 aa3.88□□□□□ -1.79
SMAD4-212ENST00000591126 A6NED7 52 aa3.87□□□□□ -1.79
SMAD4-212ENST00000591126 COX7CP15954 63 aa3.87□□□□□ -1.79
SMAD4-212ENST00000591126 K7EQZ3 153 aa3.87□□□□□ -1.79
SMAD4-212ENST00000591126 DCHS2Q6V1P9 2916 aa3.87□□□□□ -1.79
SMAD4-212ENST00000591126 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
SMAD4-212ENST00000591126 APCP25054 2843 aa3.86□□□□□ -1.79
SMAD4-212ENST00000591126 PCOTHQ58A44 107 aa3.86□□□□□ -1.79
SMAD4-212ENST00000591126 LRBAP50851 2863 aa3.86□□□□□ -1.79
SMAD4-212ENST00000591126 ERC2-IT1O76042 136 aa3.86□□□□□ -1.79
SMAD4-212ENST00000591126 LINC00483Q53H64 154 aa3.86□□□□□ -1.79
SMAD4-212ENST00000591126 IGLV8-61A0A075B6I0 122 aa3.86□□□□□ -1.79
SMAD4-212ENST00000591126 Q6ZRN7 208 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-212ENST00000591126 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
SMAD4-212ENST00000591126 SMIM29Q86T20 159 aa3.85□□□□□ -1.79
SMAD4-212ENST00000591126 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
SMAD4-212ENST00000591126 FAM104AQ969W3 186 aa3.84□□□□□ -1.79
SMAD4-212ENST00000591126 STAB1Q9NY15 2570 aa3.84□□□□□ -1.79
SMAD4-212ENST00000591126 CSAG1Q6PB30 78 aa3.84□□□□□ -1.79
SMAD4-212ENST00000591126 LINC01600Q96MT4 127 aa3.84□□□□□ -1.8
SMAD4-212ENST00000591126 COL6A5A8TX70 2615 aa3.83□□□□□ -1.8
SMAD4-212ENST00000591126 HIVEP1P15822 2718 aa3.83□□□□□ -1.8
SMAD4-212ENST00000591126 ZANQ9Y493 2812 aa3.83□□□□□ -1.8
SMAD4-212ENST00000591126 A0A1B0GU69 56 aa3.82□□□□□ -1.8
SMAD4-212ENST00000591126 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
SMAD4-212ENST00000591126 ZCCHC13Q8WW36 166 aaKnown RBP3.82□□□□□ -1.8
SMAD4-212ENST00000591126 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
SMAD4-212ENST00000591126 NIPBLQ6KC79 2804 aaeCLIP3.81□□□□□ -1.8
SMAD4-212ENST00000591126 ASB16-AS1Q495Z4 193 aa3.81□□□□□ -1.8
SMAD4-212ENST00000591126 ANAPC11Q9NYG5 84 aa3.81□□□□□ -1.8
SMAD4-212ENST00000591126 Q5XG85 94 aa3.8□□□□□ -1.8
SMAD4-212ENST00000591126 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-212ENST00000591126 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
SMAD4-212ENST00000591126 HRNRQ86YZ3 2850 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-212ENST00000591126 FBN2P35556 2912 aa3.76□□□□□ -1.81
SMAD4-212ENST00000591126 A0A1W2PNM2 257 aa3.75□□□□□ -1.81
SMAD4-212ENST00000591126 NBEAL1Q6ZS30 2694 aa3.75□□□□□ -1.81
SMAD4-212ENST00000591126 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
SMAD4-212ENST00000591126 CELSR1Q9NYQ6 3014 aa3.75□□□□□ -1.81
SMAD4-212ENST00000591126 NSD1Q96L73 2696 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-212ENST00000591126 S4R3F8 94 aa3.74□□□□□ -1.81
SMAD4-212ENST00000591126 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
SMAD4-212ENST00000591126 OTOGQ6ZRI0 2925 aa3.73□□□□□ -1.81
SMAD4-212ENST00000591126 NF1P21359 2839 aa3.72□□□□□ -1.81
SMAD4-212ENST00000591126 LCA10Q71F78 164 aa3.72□□□□□ -1.81
SMAD4-212ENST00000591126 SPANXA2-OT1Q8N9U9 137 aa3.72□□□□□ -1.81
SMAD4-212ENST00000591126 Q75L30 129 aa3.72□□□□□ -1.81
SMAD4-212ENST00000591126 A0A087WVE0 104 aa3.71□□□□□ -1.82
SMAD4-212ENST00000591126 BSNQ9UPA5 3926 aa3.71□□□□□ -1.82
SMAD4-212ENST00000591126 SPINK7P58062 85 aa3.7□□□□□ -1.82
SMAD4-212ENST00000591126 SPENQ96T58 3664 aaKnown RBP3.7□□□□□ -1.82
SMAD4-212ENST00000591126 NOTCH1P46531 2555 aa3.7□□□□□ -1.82
SMAD4-212ENST00000591126 PDZD2O15018 2839 aa3.69□□□□□ -1.82
SMAD4-212ENST00000591126 UQCR11O14957 56 aa3.69□□□□□ -1.82
SMAD4-212ENST00000591126 CSMD1Q96PZ7 3565 aa3.68□□□□□ -1.82
SMAD4-212ENST00000591126 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
SMAD4-212ENST00000591126 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
SMAD4-212ENST00000591126 CSMD2Q7Z408 3487 aa3.67□□□□□ -1.82
SMAD4-212ENST00000591126 ZFHX3Q15911 3703 aa3.67□□□□□ -1.82
SMAD4-212ENST00000591126 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
SMAD4-212ENST00000591126 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms