RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 UBE2D4Q9Y2X8 147 aa-1.43□□□□□ -2.64
DENND4A-205ENST00000562540 S100PP25815 95 aa-1.44□□□□□ -2.64
DENND4A-205ENST00000562540 DPY30Q9C005 99 aa-1.44□□□□□ -2.64
DENND4A-205ENST00000562540 PREX1Q8TCU6 1659 aa-1.45□□□□□ -2.64
DENND4A-205ENST00000562540 TRIOO75962 3097 aa-1.45□□□□□ -2.64
DENND4A-205ENST00000562540 GAFA1Q96PS6 74 aa-1.46□□□□□ -2.64
DENND4A-205ENST00000562540 C4AP0C0L4 1744 aa-1.46□□□□□ -2.64
DENND4A-205ENST00000562540 C4BP0C0L5 1744 aa-1.46□□□□□ -2.64
DENND4A-205ENST00000562540 CLTCQ00610 1675 aaKnown RBP-1.47□□□□□ -2.64
DENND4A-205ENST00000562540 C14orf144Q96I85 54 aa-1.47□□□□□ -2.64
DENND4A-205ENST00000562540 TRRAPQ9Y4A5 3859 aa-1.47□□□□□ -2.65
DENND4A-205ENST00000562540 LRRC9Q6ZRR7 1453 aa-1.48□□□□□ -2.65
DENND4A-205ENST00000562540 FYCO1Q9BQS8 1478 aa-1.48□□□□□ -2.65
DENND4A-205ENST00000562540 A0A1B0GUT8 65 aa-1.48□□□□□ -2.65
DENND4A-205ENST00000562540 KRTAP19-5Q3LI72 72 aa-1.48□□□□□ -2.65
DENND4A-205ENST00000562540 TCEAL7Q9BRU2 100 aa-1.48□□□□□ -2.65
DENND4A-205ENST00000562540 CSMD1Q96PZ7 3565 aa-1.48□□□□□ -2.65
DENND4A-205ENST00000562540 SPTAN1Q13813 2472 aaKnown RBP-1.48□□□□□ -2.65
DENND4A-205ENST00000562540 TEX14Q8IWB6 1497 aa-1.49□□□□□ -2.65
DENND4A-205ENST00000562540 IQCF6A8MYZ5 107 aa-1.49□□□□□ -2.65
DENND4A-205ENST00000562540 DNAH17Q9UFH2 4485 aa-1.49□□□□□ -2.65
DENND4A-205ENST00000562540 ZFHX4Q86UP3 3567 aa-1.49□□□□□ -2.65
DENND4A-205ENST00000562540 C3orf79P0CE67 100 aa-1.5□□□□□ -2.65
DENND4A-205ENST00000562540 SMIM11AP58511 58 aa-1.5□□□□□ -2.65
DENND4A-205ENST00000562540 PLGLAQ15195 96 aa-1.5□□□□□ -2.65
DENND4A-205ENST00000562540 DNAH5Q8TE73 4624 aa-1.5□□□□□ -2.65
DENND4A-205ENST00000562540 MT1EP04732 61 aa-1.51□□□□□ -2.65
DENND4A-205ENST00000562540 MT1BP07438 61 aa-1.51□□□□□ -2.65
DENND4A-205ENST00000562540 PRO3102Q9H379 93 aa-1.51□□□□□ -2.65
DENND4A-205ENST00000562540 ATP6V1G2-DDX39BF2Z307 99 aa-1.52□□□□□ -2.65
DENND4A-205ENST00000562540 HMGN2P05204 90 aaKnown RBP-1.52□□□□□ -2.65
DENND4A-205ENST00000562540 MT1MQ8N339 61 aa-1.52□□□□□ -2.65
DENND4A-205ENST00000562540 ACBD7Q8N6N7 88 aa-1.52□□□□□ -2.65
DENND4A-205ENST00000562540 EPRSP07814 1512 aaKnown RBP-1.52□□□□□ -2.65
DENND4A-205ENST00000562540 LRRC7Q96NW7 1537 aa-1.52□□□□□ -2.65
DENND4A-205ENST00000562540 CSMD2Q7Z408 3487 aa-1.52□□□□□ -2.65
DENND4A-205ENST00000562540 CYB5AP00167 134 aa-1.53□□□□□ -2.65
DENND4A-205ENST00000562540 RBP2P50120 134 aa-1.53□□□□□ -2.65
DENND4A-205ENST00000562540 MT1LQ93083 61 aa-1.53□□□□□ -2.65
DENND4A-205ENST00000562540 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.53□□□□□ -2.65
DENND4A-205ENST00000562540 SMG1Q96Q15 3661 aaKnown RBP-1.54□□□□□ -2.66
DENND4A-205ENST00000562540 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.54□□□□□ -2.66
DENND4A-205ENST00000562540 ATMQ13315 3056 aa-1.54□□□□□ -2.66
DENND4A-205ENST00000562540 MT2AP02795 61 aa-1.54□□□□□ -2.66
DENND4A-205ENST00000562540 LINC00158P58513 81 aa-1.54□□□□□ -2.66
DENND4A-205ENST00000562540 DEFB110Q30KQ9 67 aa-1.54□□□□□ -2.66
DENND4A-205ENST00000562540 RGPD1P0DJD0 1748 aa-1.54□□□□□ -2.66
DENND4A-205ENST00000562540 BOD1L1Q8NFC6 3051 aa-1.55□□□□□ -2.66
DENND4A-205ENST00000562540 MAP3K1Q13233 1512 aa-1.55□□□□□ -2.66
DENND4A-205ENST00000562540 PEA15Q15121 130 aa-1.55□□□□□ -2.66
DENND4A-205ENST00000562540 RANBP2P49792 3224 aaKnown RBP-1.55□□□□□ -2.66
DENND4A-205ENST00000562540 FANCAO15360 1455 aa-1.56□□□□□ -2.66
DENND4A-205ENST00000562540 SPENQ96T58 3664 aaKnown RBP-1.56□□□□□ -2.66
DENND4A-205ENST00000562540 NCMAPQ5T1S8 102 aa-1.56□□□□□ -2.66
DENND4A-205ENST00000562540 S4R3F8 94 aa-1.56□□□□□ -2.66
DENND4A-205ENST00000562540 ALKQ9UM73 1620 aa-1.56□□□□□ -2.66
DENND4A-205ENST00000562540 CNTLNQ9NXG0 1405 aa-1.57□□□□□ -2.66
DENND4A-205ENST00000562540 TIAM2Q8IVF5 1701 aa-1.57□□□□□ -2.66
DENND4A-205ENST00000562540 TRAV21A0A0B4J279 112 aa-1.57□□□□□ -2.66
DENND4A-205ENST00000562540 WFDC9Q8NEX5 89 aa-1.57□□□□□ -2.66
DENND4A-205ENST00000562540 ATP10BO94823 1461 aa-1.57□□□□□ -2.66
DENND4A-205ENST00000562540 ATP7BP35670 1465 aa-1.57□□□□□ -2.66
DENND4A-205ENST00000562540 SCN11AQ9UI33 1791 aa-1.58□□□□□ -2.66
DENND4A-205ENST00000562540 SUPT6HQ7KZ85 1726 aaKnown RBP-1.58□□□□□ -2.66
DENND4A-205ENST00000562540 RGPD3A6NKT7 1758 aaPredicted RBP-1.59□□□□□ -2.66
DENND4A-205ENST00000562540 RGPD4Q7Z3J3 1758 aa-1.59□□□□□ -2.66
DENND4A-205ENST00000562540 GYPAP02724 150 aa-1.59□□□□□ -2.66
DENND4A-205ENST00000562540 MT1GP13640 62 aa-1.59□□□□□ -2.66
DENND4A-205ENST00000562540 PRLHP81277 87 aa-1.59□□□□□ -2.66
DENND4A-205ENST00000562540 ADGRG4Q8IZF6 3080 aa-1.59□□□□□ -2.66
DENND4A-205ENST00000562540 M0R143 59 aa-1.6□□□□□ -2.67
DENND4A-205ENST00000562540 DNAH10Q8IVF4 4471 aa-1.61□□□□□ -2.67
DENND4A-205ENST00000562540 LTN1O94822 1766 aa-1.62□□□□□ -2.67
DENND4A-205ENST00000562540 SMR3BP02814 79 aaPredicted RBP-1.62□□□□□ -2.67
DENND4A-205ENST00000562540 CLPSL2Q6UWE3 100 aa-1.62□□□□□ -2.67
DENND4A-205ENST00000562540 C20orf78Q9BR46 151 aa-1.62□□□□□ -2.67
DENND4A-205ENST00000562540 NEXMIFQ5QGS0 1516 aa-1.62□□□□□ -2.67
DENND4A-205ENST00000562540 PLXNC1O60486 1568 aa-1.64□□□□□ -2.67
DENND4A-205ENST00000562540 USP32Q8NFA0 1604 aa-1.64□□□□□ -2.67
DENND4A-205ENST00000562540 MYMXA0A1B0GTQ4 84 aa-1.64□□□□□ -2.67
DENND4A-205ENST00000562540 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.64□□□□□ -2.67
DENND4A-205ENST00000562540 POLR1AO95602 1720 aaPredicted RBP-1.65□□□□□ -2.67
DENND4A-205ENST00000562540 NDUFB1O75438 58 aa-1.65□□□□□ -2.67
DENND4A-205ENST00000562540 CENPEQ02224 2701 aa-1.66□□□□□ -2.67
DENND4A-205ENST00000562540 PRUNE2Q8WUY3 3088 aa-1.66□□□□□ -2.68
DENND4A-205ENST00000562540 NESP48681 1621 aa-1.66□□□□□ -2.68
DENND4A-205ENST00000562540 WIZO95785 1651 aa-1.67□□□□□ -2.68
DENND4A-205ENST00000562540 NWD1Q149M9 1564 aa-1.67□□□□□ -2.68
DENND4A-205ENST00000562540 CDC42BPGQ6DT37 1551 aa-1.67□□□□□ -2.68
DENND4A-205ENST00000562540 UBR1Q8IWV7 1749 aa-1.67□□□□□ -2.68
DENND4A-205ENST00000562540 DOT1LQ8TEK3 1739 aa-1.67□□□□□ -2.68
DENND4A-205ENST00000562540 MGAQ8IWI9 3026 aa-1.68□□□□□ -2.68
DENND4A-205ENST00000562540 CDC42BPAQ5VT25 1732 aa-1.68□□□□□ -2.68
DENND4A-205ENST00000562540 PLIN4Q96Q06 1357 aa-1.68□□□□□ -2.68
DENND4A-205ENST00000562540 MYO3AQ8NEV4 1616 aa-1.68□□□□□ -2.68
DENND4A-205ENST00000562540 IFI6P09912 130 aa-1.68□□□□□ -2.68
DENND4A-205ENST00000562540 FREM2Q5SZK8 3169 aa-1.68□□□□□ -2.68
DENND4A-205ENST00000562540 ABCC10Q5T3U5 1492 aa-1.69□□□□□ -2.68
DENND4A-205ENST00000562540 ACYP1P07311 99 aa-1.69□□□□□ -2.68
DENND4A-205ENST00000562540 KRTAP8-1Q8IUC2 63 aa-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms