RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TAX1BP3O14907 124 aa6.23□□□□□ -1.41
TPM1-217ENST00000559108 SSBP3-AS1Q7Z2R9 100 aa6.23□□□□□ -1.41
TPM1-217ENST00000559108 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
TPM1-217ENST00000559108 LAMTOR3Q9UHA4 124 aa6.22□□□□□ -1.41
TPM1-217ENST00000559108 LST1O00453 97 aa6.21□□□□□ -1.42
TPM1-217ENST00000559108 LPAP08519 4548 aa6.2□□□□□ -1.42
TPM1-217ENST00000559108 A0A1B0GX51 115 aa6.2□□□□□ -1.42
TPM1-217ENST00000559108 H3BUT2 72 aa6.2□□□□□ -1.42
TPM1-217ENST00000559108 TCL1BO95988 128 aa6.2□□□□□ -1.42
TPM1-217ENST00000559108 HRCT1Q6UXD1 115 aa6.2□□□□□ -1.42
TPM1-217ENST00000559108 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
TPM1-217ENST00000559108 PCP4L1A6NKN8 68 aa6.19□□□□□ -1.42
TPM1-217ENST00000559108 IGFL1Q6UW32 110 aa6.18□□□□□ -1.42
TPM1-217ENST00000559108 TRACP01848 142 aa6.17□□□□□ -1.42
TPM1-217ENST00000559108 COX6CP09669 75 aa6.17□□□□□ -1.42
TPM1-217ENST00000559108 SCGB1C2P0DMR2 95 aa6.17□□□□□ -1.42
TPM1-217ENST00000559108 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
TPM1-217ENST00000559108 OCIAD2Q56VL3 154 aa6.17□□□□□ -1.42
TPM1-217ENST00000559108 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
TPM1-217ENST00000559108 PPDPFLQ8WWR9 84 aa6.17□□□□□ -1.42
TPM1-217ENST00000559108 C9orf118A6NHY6 69 aa6.16□□□□□ -1.42
TPM1-217ENST00000559108 SPINK1P00995 79 aa6.16□□□□□ -1.42
TPM1-217ENST00000559108 LRP2P98164 4655 aa6.15□□□□□ -1.43
TPM1-217ENST00000559108 A0A1B0GV72 72 aa6.14□□□□□ -1.43
TPM1-217ENST00000559108 FABP2P12104 132 aa6.14□□□□□ -1.43
TPM1-217ENST00000559108 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
TPM1-217ENST00000559108 C4orf48Q5BLP8 95 aa6.14□□□□□ -1.43
TPM1-217ENST00000559108 ORMDL1Q9P0S3 153 aa6.14□□□□□ -1.43
TPM1-217ENST00000559108 A0A1W2PPM0 123 aa6.13□□□□□ -1.43
TPM1-217ENST00000559108 PRR4Q16378 134 aa6.13□□□□□ -1.43
TPM1-217ENST00000559108 F8WEM9 126 aa6.12□□□□□ -1.43
TPM1-217ENST00000559108 DNAL4O96015 105 aa6.12□□□□□ -1.43
TPM1-217ENST00000559108 CD164Q04900 197 aa6.12□□□□□ -1.43
TPM1-217ENST00000559108 H3BMG7 143 aa6.11□□□□□ -1.43
TPM1-217ENST00000559108 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
TPM1-217ENST00000559108 A0A1W2PNM2 257 aa6.1□□□□□ -1.43
TPM1-217ENST00000559108 SNCGO76070 127 aa6.1□□□□□ -1.43
TPM1-217ENST00000559108 BAALC-AS2P0C853 105 aa6.1□□□□□ -1.43
TPM1-217ENST00000559108 COL5A1-AS1Q5SY13 56 aa6.1□□□□□ -1.43
TPM1-217ENST00000559108 Q6JHZ5 121 aa6.1□□□□□ -1.43
TPM1-217ENST00000559108 MTURNQ8N3F0 131 aa6.1□□□□□ -1.43
TPM1-217ENST00000559108 TRBV7-7A0A0K0K1E9 115 aa6.09□□□□□ -1.43
TPM1-217ENST00000559108 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.43
TPM1-217ENST00000559108 IGLV7-46A0A075B6I9 117 aa6.08□□□□□ -1.44
TPM1-217ENST00000559108 TMEM256-PLSCR3K7ERE1 68 aa6.08□□□□□ -1.44
TPM1-217ENST00000559108 UBE2V1Q13404 147 aa6.08□□□□□ -1.44
TPM1-217ENST00000559108 Q5XG85 94 aa6.08□□□□□ -1.44
TPM1-217ENST00000559108 C9JAW5 83 aa6.07□□□□□ -1.44
TPM1-217ENST00000559108 C1orf195Q5TG92 126 aa6.07□□□□□ -1.44
TPM1-217ENST00000559108 ANKRD29Q8N6D5 301 aa6.07□□□□□ -1.44
TPM1-217ENST00000559108 TRBV20-1A0A075B6N2 111 aa6.06□□□□□ -1.44
TPM1-217ENST00000559108 TRBV7-4A0A0J9YYF1 115 aa6.06□□□□□ -1.44
TPM1-217ENST00000559108 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
TPM1-217ENST00000559108 Q6Q795 121 aa6.06□□□□□ -1.44
TPM1-217ENST00000559108 SPCS1Q9Y6A9 102 aa6.06□□□□□ -1.44
TPM1-217ENST00000559108 SMCPP49901 116 aaPredicted RBP6.05□□□□□ -1.44
TPM1-217ENST00000559108 LYRM7Q5U5X0 104 aa6.05□□□□□ -1.44
TPM1-217ENST00000559108 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
TPM1-217ENST00000559108 LIMD2Q9BT23 127 aa6.05□□□□□ -1.44
TPM1-217ENST00000559108 PRO0461Q9UI25 63 aa6.04□□□□□ -1.44
TPM1-217ENST00000559108 H3BQ85 93 aa6.03□□□□□ -1.44
TPM1-217ENST00000559108 GHRHP01286 108 aa6.03□□□□□ -1.44
TPM1-217ENST00000559108 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
TPM1-217ENST00000559108 OBSCN-AS1Q96MR7 158 aa6.03□□□□□ -1.44
TPM1-217ENST00000559108 A0A087WSZ3 146 aa6.02□□□□□ -1.45
TPM1-217ENST00000559108 K7EP34 96 aa6.02□□□□□ -1.45
TPM1-217ENST00000559108 ASB16-AS1Q495Z4 193 aa6.02□□□□□ -1.45
TPM1-217ENST00000559108 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
TPM1-217ENST00000559108 Q96NJ1 140 aa6.02□□□□□ -1.45
TPM1-217ENST00000559108 H3BT86 120 aa6□□□□□ -1.45
TPM1-217ENST00000559108 RBM3P98179 157 aaKnown RBP6□□□□□ -1.45
TPM1-217ENST00000559108 C14orf132Q9NPU4 83 aa6□□□□□ -1.45
TPM1-217ENST00000559108 CCKP06307 115 aa5.99□□□□□ -1.45
TPM1-217ENST00000559108 Q6ZQT0 140 aa5.99□□□□□ -1.45
TPM1-217ENST00000559108 LCE2DQ5TA82 110 aaPredicted RBP5.98□□□□□ -1.45
TPM1-217ENST00000559108 LOC110117498A0A087WWA1 95 aa5.97□□□□□ -1.45
TPM1-217ENST00000559108 C9orf92A6NGG3 77 aa5.97□□□□□ -1.45
TPM1-217ENST00000559108 VPS25Q9BRG1 176 aa5.97□□□□□ -1.45
TPM1-217ENST00000559108 MUC17Q685J3 4493 aa5.97□□□□□ -1.45
TPM1-217ENST00000559108 XP32Q5T750 250 aa5.96□□□□□ -1.46
TPM1-217ENST00000559108 DSCR8Q96T75 97 aa5.96□□□□□ -1.46
TPM1-217ENST00000559108 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
TPM1-217ENST00000559108 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
TPM1-217ENST00000559108 LINC00472Q9H8W2 130 aa5.94□□□□□ -1.46
TPM1-217ENST00000559108 DEFB116Q30KQ4 102 aa5.93□□□□□ -1.46
TPM1-217ENST00000559108 SS18L2Q9UHA2 77 aa5.93□□□□□ -1.46
TPM1-217ENST00000559108 RNF213Q63HN8 5207 aa5.93□□□□□ -1.46
TPM1-217ENST00000559108 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
TPM1-217ENST00000559108 A0A1B0GV90 55 aa5.9□□□□□ -1.46
TPM1-217ENST00000559108 GTF2H5Q6ZYL4 71 aa5.89□□□□□ -1.47
TPM1-217ENST00000559108 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
TPM1-217ENST00000559108 IGKV4-1P06312 121 aa5.87□□□□□ -1.47
TPM1-217ENST00000559108 PDE6GP18545 87 aa5.87□□□□□ -1.47
TPM1-217ENST00000559108 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
TPM1-217ENST00000559108 DSCR10P59022 87 aa5.86□□□□□ -1.47
TPM1-217ENST00000559108 ETDBQ3ZM63 59 aa5.85□□□□□ -1.47
TPM1-217ENST00000559108 MUC2Q02817 5179 aa5.85□□□□□ -1.47
TPM1-217ENST00000559108 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.47
TPM1-217ENST00000559108 F8W1H4 67 aa5.84□□□□□ -1.47
TPM1-217ENST00000559108 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms