RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 A0A1B0GX51 115 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 H3BMG7 143 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 ZNF861PO60384 105 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 CXCL5P42830 114 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 MEIG1Q5JSS6 88 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 LPAP08519 4548 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 RPL37AP8A6NKH3 93 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 TCL1BO95988 128 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 IFITM1P13164 125 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 PRR4Q16378 134 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 OCIAD2Q56VL3 154 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 SOSTDC1Q6X4U4 206 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 LINC00308Q8TCZ7 52 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 PRO0461Q9UI25 63 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 ERG28Q9UKR5 140 aa4□□□□□ -1.77
PSEN1-216ENST00000556066 SCGB1C2P0DMR2 95 aa3.99□□□□□ -1.77
PSEN1-216ENST00000556066 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
PSEN1-216ENST00000556066 F8W1H4 67 aa3.98□□□□□ -1.77
PSEN1-216ENST00000556066 BCE1O60756 84 aa3.98□□□□□ -1.77
PSEN1-216ENST00000556066 Q1RN00 199 aa3.98□□□□□ -1.77
PSEN1-216ENST00000556066 NKAPP1Q8N9T2 125 aa3.98□□□□□ -1.77
PSEN1-216ENST00000556066 FAM218AQ96MZ4 157 aa3.98□□□□□ -1.77
PSEN1-216ENST00000556066 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
PSEN1-216ENST00000556066 J3KT08 172 aa3.97□□□□□ -1.77
PSEN1-216ENST00000556066 LYRM7Q5U5X0 104 aa3.97□□□□□ -1.77
PSEN1-216ENST00000556066 MIR7-3HGQ8N6C7 128 aa3.97□□□□□ -1.77
PSEN1-216ENST00000556066 IGKV2-28A0A075B6P5 120 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 A0A087X002 238 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 NDUFC2O95298 119 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 IGKV2D-28P01615 120 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 CRYGAP11844 174 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 UBE2AP49459 152 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 LINC00158P58513 81 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 ETDBQ3ZM63 59 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 ANAPC11Q9NYG5 84 aa3.96□□□□□ -1.78
PSEN1-216ENST00000556066 TRBV20-1A0A075B6N2 111 aa3.95□□□□□ -1.78
PSEN1-216ENST00000556066 FAM236DA0A1B0GTK5 79 aa3.95□□□□□ -1.78
PSEN1-216ENST00000556066 FAM236CP0DP71 79 aa3.95□□□□□ -1.78
PSEN1-216ENST00000556066 COPS9Q8WXC6 57 aa3.95□□□□□ -1.78
PSEN1-216ENST00000556066 CLEC2BQ92478 149 aa3.95□□□□□ -1.78
PSEN1-216ENST00000556066 IGLV5-37A0A075B6J1 123 aa3.94□□□□□ -1.78
PSEN1-216ENST00000556066 C9JAW5 83 aa3.94□□□□□ -1.78
PSEN1-216ENST00000556066 PRLHP81277 87 aa3.94□□□□□ -1.78
PSEN1-216ENST00000556066 ATXN8Q156A1 80 aa3.94□□□□□ -1.78
PSEN1-216ENST00000556066 MPLKIPQ8TAP9 179 aa3.94□□□□□ -1.78
PSEN1-216ENST00000556066 SND1-IT1Q9HBX3 110 aa3.94□□□□□ -1.78
PSEN1-216ENST00000556066 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
PSEN1-216ENST00000556066 NDUFS5O43920 106 aa3.93□□□□□ -1.78
PSEN1-216ENST00000556066 LINC00337Q8N6G1 96 aa3.93□□□□□ -1.78
PSEN1-216ENST00000556066 LAMTOR3Q9UHA4 124 aa3.93□□□□□ -1.78
PSEN1-216ENST00000556066 LST1O00453 97 aa3.92□□□□□ -1.78
PSEN1-216ENST00000556066 SLC25A20O43772 301 aa3.92□□□□□ -1.78
PSEN1-216ENST00000556066 COX6CP09669 75 aa3.92□□□□□ -1.78
PSEN1-216ENST00000556066 COX17Q14061 63 aa3.92□□□□□ -1.78
PSEN1-216ENST00000556066 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
PSEN1-216ENST00000556066 KRTAP13-1Q8IUC0 172 aa3.92□□□□□ -1.78
PSEN1-216ENST00000556066 ANKRD29Q8N6D5 301 aa3.92□□□□□ -1.78
PSEN1-216ENST00000556066 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
PSEN1-216ENST00000556066 RETNLBQ9BQ08 111 aa3.91□□□□□ -1.78
PSEN1-216ENST00000556066 TRAV13-2A0A0B4J235 113 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 TRBV10-2A0A0K0K1G8 114 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 M0R378 163 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 PSPHP1O15172 72 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 TEN1Q86WV5 123 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 Q8NDZ9 215 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 PPDPFLQ8WWR9 84 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 HIGD2AQ9BW72 106 aa3.9□□□□□ -1.79
PSEN1-216ENST00000556066 J3QR89 54 aa3.88□□□□□ -1.79
PSEN1-216ENST00000556066 NCR3O14931 201 aa3.88□□□□□ -1.79
PSEN1-216ENST00000556066 C3orf22Q8N5N4 141 aa3.88□□□□□ -1.79
PSEN1-216ENST00000556066 TEX49A0A1B0GTD5 131 aa3.87□□□□□ -1.79
PSEN1-216ENST00000556066 H3BT86 120 aa3.87□□□□□ -1.79
PSEN1-216ENST00000556066 TRACP01848 142 aa3.87□□□□□ -1.79
PSEN1-216ENST00000556066 BAALC-AS2P0C853 105 aa3.87□□□□□ -1.79
PSEN1-216ENST00000556066 IGLV7-46A0A075B6I9 117 aa3.86□□□□□ -1.79
PSEN1-216ENST00000556066 H0YGX0 51 aa3.86□□□□□ -1.79
PSEN1-216ENST00000556066 SPRR4Q96PI1 79 aa3.85□□□□□ -1.79
PSEN1-216ENST00000556066 ZNF706Q9Y5V0 76 aaPredicted RBP3.85□□□□□ -1.79
PSEN1-216ENST00000556066 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 IGHV6-1A0A0B4J1U7 121 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 TRBV10-3A0A0K0K1G6 114 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 ETDCA0A1B0GVM5 59 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 TPRXLQ17RH7 258 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 C6orf99Q4VX62 202 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 SMCR5Q8TEV8 140 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
PSEN1-216ENST00000556066 MP68P56378 58 aa3.83□□□□□ -1.8
PSEN1-216ENST00000556066 S100A7L2Q5SY68 101 aa3.83□□□□□ -1.8
PSEN1-216ENST00000556066 SPAG11AQ6PDA7 123 aa3.83□□□□□ -1.8
PSEN1-216ENST00000556066 Q8NBF4 154 aa3.83□□□□□ -1.8
PSEN1-216ENST00000556066 KCNQ1DNQ9H478 68 aa3.83□□□□□ -1.8
PSEN1-216ENST00000556066 IGLV6-57P01721 117 aa3.82□□□□□ -1.8
PSEN1-216ENST00000556066 Q6Q795 121 aa3.82□□□□□ -1.8
PSEN1-216ENST00000556066 IMUPQ9GZP8 106 aa3.82□□□□□ -1.8
PSEN1-216ENST00000556066 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms