RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 MED13LQ71F56 2210 aa2.05□□□□□ -2.08
LRFN5-204ENST00000554171 ASXL3Q9C0F0 2248 aa2.05□□□□□ -2.08
LRFN5-204ENST00000554171 TEX15Q9BXT5 2789 aa2.04□□□□□ -2.08
LRFN5-204ENST00000554171 A0A1B0GU69 56 aa2.04□□□□□ -2.08
LRFN5-204ENST00000554171 KRTAP3-1Q9BYR8 98 aa2.04□□□□□ -2.08
LRFN5-204ENST00000554171 EPG5Q9HCE0 2579 aa2.04□□□□□ -2.08
LRFN5-204ENST00000554171 MUC6Q6W4X9 2439 aa2.04□□□□□ -2.08
LRFN5-204ENST00000554171 PIEZO2Q9H5I5 2752 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 COX17Q14061 63 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 CCL26Q9Y258 94 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 FLNCQ14315 2725 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 HERC1Q15751 4861 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 MEGF8Q7Z7M0 2845 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 A0A1B0GUV1 79 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 H0YGG7 62 aa2.03□□□□□ -2.08
LRFN5-204ENST00000554171 IGFL1Q6UW32 110 aa2.03□□□□□ -2.09
LRFN5-204ENST00000554171 TACC2O95359 2948 aa2.02□□□□□ -2.09
LRFN5-204ENST00000554171 TTC28Q96AY4 2481 aa2.02□□□□□ -2.09
LRFN5-204ENST00000554171 KRTAP9-7A8MTY7 169 aa2.02□□□□□ -2.09
LRFN5-204ENST00000554171 R4GN34 69 aa2.02□□□□□ -2.09
LRFN5-204ENST00000554171 APCP25054 2843 aa2.02□□□□□ -2.09
LRFN5-204ENST00000554171 KRTAP9-9Q9BYP9 154 aa2.01□□□□□ -2.09
LRFN5-204ENST00000554171 KRTAP9-4Q9BYQ2 154 aa2.01□□□□□ -2.09
LRFN5-204ENST00000554171 EPPK1P58107 5090 aaKnown RBP2.01□□□□□ -2.09
LRFN5-204ENST00000554171 LELP1Q5T871 98 aa2□□□□□ -2.09
LRFN5-204ENST00000554171 Q6ZRN7 208 aaPredicted RBP2□□□□□ -2.09
LRFN5-204ENST00000554171 KRTAP10-2P60368 255 aa2□□□□□ -2.09
LRFN5-204ENST00000554171 Q9Y3F1 56 aa2□□□□□ -2.09
LRFN5-204ENST00000554171 Q6ZRX8 168 aa1.99□□□□□ -2.09
LRFN5-204ENST00000554171 CRIPTQ9P021 101 aa1.99□□□□□ -2.09
LRFN5-204ENST00000554171 OTOGLQ3ZCN5 2332 aa1.99□□□□□ -2.09
LRFN5-204ENST00000554171 DNAH10Q8IVF4 4471 aa1.99□□□□□ -2.09
LRFN5-204ENST00000554171 KRTAP1-3Q8IUG1 177 aa1.98□□□□□ -2.09
LRFN5-204ENST00000554171 C16orf74Q96GX8 76 aa1.98□□□□□ -2.09
LRFN5-204ENST00000554171 MYO18BQ8IUG5 2567 aa1.98□□□□□ -2.09
LRFN5-204ENST00000554171 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
LRFN5-204ENST00000554171 SORL1Q92673 2214 aa1.97□□□□□ -2.09
LRFN5-204ENST00000554171 KRTAP12-2P59991 146 aa1.97□□□□□ -2.09
LRFN5-204ENST00000554171 COL7A1Q02388 2944 aa1.97□□□□□ -2.09
LRFN5-204ENST00000554171 LCE3BQ5TA77 95 aa1.97□□□□□ -2.09
LRFN5-204ENST00000554171 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
LRFN5-204ENST00000554171 HELZ2Q9BYK8 2649 aaKnown RBP1.96□□□□□ -2.09
LRFN5-204ENST00000554171 LYNX1P0DP58 116 aa1.96□□□□□ -2.1
LRFN5-204ENST00000554171 SPRR1AP35321 89 aa1.96□□□□□ -2.1
LRFN5-204ENST00000554171 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
LRFN5-204ENST00000554171 GVQW2A0A096LPI5 108 aaPredicted RBP1.96□□□□□ -2.1
LRFN5-204ENST00000554171 RPL37AP61513 92 aaKnown RBP1.96□□□□□ -2.1
LRFN5-204ENST00000554171 DEFB103AP81534 67 aa1.96□□□□□ -2.1
LRFN5-204ENST00000554171 ITPR2Q14571 2701 aa1.96□□□□□ -2.1
LRFN5-204ENST00000554171 MAP1BP46821 2468 aaKnown RBP1.95□□□□□ -2.1
LRFN5-204ENST00000554171 STARD9Q9P2P6 4700 aa1.95□□□□□ -2.1
LRFN5-204ENST00000554171 PKD1L2Q7Z442 2459 aa1.95□□□□□ -2.1
LRFN5-204ENST00000554171 ATRXP46100 2492 aa1.95□□□□□ -2.1
LRFN5-204ENST00000554171 INE1O15225 51 aa1.95□□□□□ -2.1
LRFN5-204ENST00000554171 TP53AIP1Q9HCN2 124 aa1.95□□□□□ -2.1
LRFN5-204ENST00000554171 LY6EQ16553 131 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 GVINP1Q7Z2Y8 2422 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 IGF2RP11717 2491 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 URB1O60287 2271 aaKnown RBP1.94□□□□□ -2.1
LRFN5-204ENST00000554171 ACYP2P14621 99 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 DEFB1P60022 68 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 NCOR1O75376 2440 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 A0A1B0GVY2 172 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 UNQ6190/PRO20217Q6UXQ8 127 aa1.94□□□□□ -2.1
LRFN5-204ENST00000554171 MAP1AP78559 2803 aaPredicted RBP1.93□□□□□ -2.1
LRFN5-204ENST00000554171 C14orf177Q52M58 125 aa1.93□□□□□ -2.1
LRFN5-204ENST00000554171 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
LRFN5-204ENST00000554171 KRTAP21-3Q3LHN1 58 aa1.93□□□□□ -2.1
LRFN5-204ENST00000554171 FLGP20930 4061 aaPredicted RBP1.93□□□□□ -2.1
LRFN5-204ENST00000554171 C10orf99Q6UWK7 81 aa1.93□□□□□ -2.1
LRFN5-204ENST00000554171 RYR1P21817 5038 aa1.92□□□□□ -2.1
LRFN5-204ENST00000554171 ASCC3Q8N3C0 2202 aaKnown RBP1.92□□□□□ -2.1
LRFN5-204ENST00000554171 K7EIL1 84 aa1.92□□□□□ -2.1
LRFN5-204ENST00000554171 WFDC13Q8IUB5 93 aa1.92□□□□□ -2.1
LRFN5-204ENST00000554171 MAST4O15021 2626 aa1.92□□□□□ -2.1
LRFN5-204ENST00000554171 PP632Q6XCG6 107 aa1.91□□□□□ -2.1
LRFN5-204ENST00000554171 DOPEY2Q9Y3R5 2298 aa1.91□□□□□ -2.1
LRFN5-204ENST00000554171 C6orf48Q9UBA6 75 aa1.91□□□□□ -2.1
LRFN5-204ENST00000554171 MRPL33O75394 65 aaKnown RBP1.91□□□□□ -2.1
LRFN5-204ENST00000554171 KRTAP7-1Q8IUC3 87 aa1.91□□□□□ -2.1
LRFN5-204ENST00000554171 CHD8Q9HCK8 2581 aa1.91□□□□□ -2.1
LRFN5-204ENST00000554171 KRTAP10-9P60411 292 aa1.9□□□□□ -2.1
LRFN5-204ENST00000554171 CENPEQ02224 2701 aa1.9□□□□□ -2.11
LRFN5-204ENST00000554171 HERC2O95714 4834 aa1.9□□□□□ -2.11
LRFN5-204ENST00000554171 PLAC4Q8WY50 150 aa1.9□□□□□ -2.11
LRFN5-204ENST00000554171 ANKRD11Q6UB99 2663 aaPredicted RBP1.9□□□□□ -2.11
LRFN5-204ENST00000554171 WFDC10BQ8IUB3 73 aa1.89□□□□□ -2.11
LRFN5-204ENST00000554171 DEFB109BQ30KR1 87 aa1.89□□□□□ -2.11
LRFN5-204ENST00000554171 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
LRFN5-204ENST00000554171 TYMSOSQ8TAI1 123 aa1.89□□□□□ -2.11
LRFN5-204ENST00000554171 NIPBLQ6KC79 2804 aaeCLIP1.89□□□□□ -2.11
LRFN5-204ENST00000554171 SSBP3-AS1Q7Z2R9 100 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 KRTAP9-3Q9BYQ3 159 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 DNAH5Q8TE73 4624 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 KRTAP4-8A0A0G2JLE6 195 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 APELAP0DMC3 54 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 UNC79Q9P2D8 2635 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 HIVEP1P15822 2718 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 PKD1L1Q8TDX9 2849 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms