RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 NMES1Q9C002 83 aa0.31□□□□□ -2.36
CCDC38-208ENST00000549876 PREX2Q70Z35 1606 aa0.31□□□□□ -2.36
CCDC38-208ENST00000549876 CHD6Q8TD26 2715 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 PTPN13Q12923 2485 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 DEFB135Q30KP9 77 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 NCBP2-AS2Q69YL0 99 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 ABCA2Q9BZC7 2435 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 GLI2P10070 1586 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 CROCC2H7BZ55 1655 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 PDE4DIPQ5VU43 2346 aa0.3□□□□□ -2.36
CCDC38-208ENST00000549876 PRXQ9BXM0 1461 aa0.29□□□□□ -2.36
CCDC38-208ENST00000549876 IAPPP10997 89 aa0.29□□□□□ -2.36
CCDC38-208ENST00000549876 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
CCDC38-208ENST00000549876 REV3LO60673 3130 aa0.29□□□□□ -2.36
CCDC38-208ENST00000549876 CPS1P31327 1500 aa0.28□□□□□ -2.36
CCDC38-208ENST00000549876 ATRQ13535 2644 aa0.28□□□□□ -2.36
CCDC38-208ENST00000549876 ALMS1Q8TCU4 4167 aa0.28□□□□□ -2.36
CCDC38-208ENST00000549876 H0YGG7 62 aa0.28□□□□□ -2.36
CCDC38-208ENST00000549876 PRM1P04553 51 aa0.28□□□□□ -2.36
CCDC38-208ENST00000549876 KMT2AQ03164 3969 aa0.28□□□□□ -2.36
CCDC38-208ENST00000549876 LPAP08519 4548 aa0.28□□□□□ -2.37
CCDC38-208ENST00000549876 EP300Q09472 2414 aaPredicted RBP0.27□□□□□ -2.37
CCDC38-208ENST00000549876 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 TNXBP22105 4242 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 PKD1L1Q8TDX9 2849 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 DEFB130BP0DP73 79 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 DEFB130AP0DP74 79 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 FCER1GP30273 86 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 MINOS1Q5TGZ0 78 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 CLASP1Q7Z460 1538 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 SYCP2Q9BX26 1530 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 ITSN2Q9NZM3 1697 aa0.27□□□□□ -2.37
CCDC38-208ENST00000549876 M0R1W7 72 aa0.26□□□□□ -2.37
CCDC38-208ENST00000549876 SPRR2DP22532 72 aa0.26□□□□□ -2.37
CCDC38-208ENST00000549876 ADCY10Q96PN6 1610 aa0.26□□□□□ -2.37
CCDC38-208ENST00000549876 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
CCDC38-208ENST00000549876 HIVEP3Q5T1R4 2406 aa0.25□□□□□ -2.37
CCDC38-208ENST00000549876 UGGT1Q9NYU2 1555 aa0.25□□□□□ -2.37
CCDC38-208ENST00000549876 C6orf48Q9UBA6 75 aa0.25□□□□□ -2.37
CCDC38-208ENST00000549876 KMT2DO14686 5537 aa0.25□□□□□ -2.37
CCDC38-208ENST00000549876 CDC42BPAQ5VT25 1732 aa0.24□□□□□ -2.37
CCDC38-208ENST00000549876 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
CCDC38-208ENST00000549876 IGIPA6NJ69 53 aa0.24□□□□□ -2.37
CCDC38-208ENST00000549876 TMEM167BQ9NRX6 74 aa0.24□□□□□ -2.37
CCDC38-208ENST00000549876 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
CCDC38-208ENST00000549876 WNK1Q9H4A3 2382 aa0.24□□□□□ -2.37
CCDC38-208ENST00000549876 APC2O95996 2303 aa0.24□□□□□ -2.37
CCDC38-208ENST00000549876 FAT4Q6V0I7 4981 aa0.24□□□□□ -2.37
CCDC38-208ENST00000549876 PRLHP81277 87 aa0.23□□□□□ -2.37
CCDC38-208ENST00000549876 WT1-ASQ06250 92 aa0.23□□□□□ -2.37
CCDC38-208ENST00000549876 ANKRD36CQ5JPF3 1778 aa0.23□□□□□ -2.37
CCDC38-208ENST00000549876 UBR5O95071 2799 aaPredicted RBP0.23□□□□□ -2.37
CCDC38-208ENST00000549876 MROH2AA6NES4 1674 aa0.23□□□□□ -2.37
CCDC38-208ENST00000549876 TRANK1O15050 2925 aa0.23□□□□□ -2.37
CCDC38-208ENST00000549876 TOGARAM1Q9Y4F4 1720 aa0.22□□□□□ -2.37
CCDC38-208ENST00000549876 H0YGX0 51 aa0.22□□□□□ -2.37
CCDC38-208ENST00000549876 H3BUA1 57 aa0.22□□□□□ -2.37
CCDC38-208ENST00000549876 SPRR2BP35325 72 aa0.22□□□□□ -2.37
CCDC38-208ENST00000549876 RPS27P42677 84 aaKnown RBP0.22□□□□□ -2.37
CCDC38-208ENST00000549876 RPS27LQ71UM5 84 aaKnown RBP0.22□□□□□ -2.37
CCDC38-208ENST00000549876 MAST4O15021 2626 aa0.21□□□□□ -2.38
CCDC38-208ENST00000549876 CELSR1Q9NYQ6 3014 aa0.21□□□□□ -2.38
CCDC38-208ENST00000549876 ABCA5Q8WWZ7 1642 aa0.2□□□□□ -2.38
CCDC38-208ENST00000549876 PCNX1Q96RV3 2341 aa0.2□□□□□ -2.38
CCDC38-208ENST00000549876 TIMM8BQ9Y5J9 83 aaPredicted RBP0.2□□□□□ -2.38
CCDC38-208ENST00000549876 S4R3F8 94 aa0.2□□□□□ -2.38
CCDC38-208ENST00000549876 ACANP16112 2415 aa0.2□□□□□ -2.38
CCDC38-208ENST00000549876 FANCD2Q9BXW9 1451 aa0.2□□□□□ -2.38
CCDC38-208ENST00000549876 DSPP15924 2871 aaKnown RBP0.19□□□□□ -2.38
CCDC38-208ENST00000549876 MAP1BP46821 2468 aaKnown RBP0.19□□□□□ -2.38
CCDC38-208ENST00000549876 C9orf92A6NGG3 77 aa0.19□□□□□ -2.38
CCDC38-208ENST00000549876 PLNP26678 52 aa0.19□□□□□ -2.38
CCDC38-208ENST00000549876 DEFB106AQ8N104 65 aa0.19□□□□□ -2.38
CCDC38-208ENST00000549876 CMC2Q9NRP2 79 aa0.19□□□□□ -2.38
CCDC38-208ENST00000549876 ABCC8Q09428 1581 aa0.19□□□□□ -2.38
CCDC38-208ENST00000549876 DMBT1Q9UGM3 2413 aaPredicted RBP0.18□□□□□ -2.38
CCDC38-208ENST00000549876 NBASA2RRP1 2371 aa0.18□□□□□ -2.38
CCDC38-208ENST00000549876 CACNA1AO00555 2505 aa0.18□□□□□ -2.38
CCDC38-208ENST00000549876 LINC00308Q8TCZ7 52 aa0.18□□□□□ -2.38
CCDC38-208ENST00000549876 AGLP35573 1532 aa0.18□□□□□ -2.38
CCDC38-208ENST00000549876 PKD1P98161 4303 aa0.17□□□□□ -2.38
CCDC38-208ENST00000549876 NRXN3Q9Y4C0 1643 aa0.17□□□□□ -2.38
CCDC38-208ENST00000549876 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
CCDC38-208ENST00000549876 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
CCDC38-208ENST00000549876 SETXQ7Z333 2677 aaKnown RBP0.17□□□□□ -2.38
CCDC38-208ENST00000549876 A0A1B0GUL6 1792 aa0.17□□□□□ -2.38
CCDC38-208ENST00000549876 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
CCDC38-208ENST00000549876 PRRC2CQ9Y520 2896 aaKnown RBP0.16□□□□□ -2.38
CCDC38-208ENST00000549876 SNRPGP15A8MWD9 76 aa0.16□□□□□ -2.38
CCDC38-208ENST00000549876 NOP10Q9NPE3 64 aaKnown RBP0.16□□□□□ -2.38
CCDC38-208ENST00000549876 HSPG2P98160 4391 aa0.16□□□□□ -2.38
CCDC38-208ENST00000549876 DCHS2Q6V1P9 2916 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 EFCAB6Q5THR3 1501 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 ABRACLQ9P1F3 81 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 AKAP13Q12802 2813 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 HECTD4Q9Y4D8 3996 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 CREBBPQ92793 2442 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 LYSTQ99698 3801 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 HECTD1Q9ULT8 2610 aa0.15□□□□□ -2.39
CCDC38-208ENST00000549876 LMO7Q8WWI1 1683 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms