RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 ASH1LQ9NR48 2969 aaKnown RBP0.54□□□□□ -2.32
CNOT2-215ENST00000548863 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
CNOT2-215ENST00000548863 WNK2Q9Y3S1 2297 aa0.54□□□□□ -2.32
CNOT2-215ENST00000548863 SAMD9LQ8IVG5 1584 aa0.54□□□□□ -2.32
CNOT2-215ENST00000548863 RPS27P42677 84 aaKnown RBP0.54□□□□□ -2.32
CNOT2-215ENST00000548863 RPS27LQ71UM5 84 aaKnown RBP0.54□□□□□ -2.32
CNOT2-215ENST00000548863 SMIM2Q9BVW6 85 aa0.54□□□□□ -2.32
CNOT2-215ENST00000548863 NFAT5O94916 1531 aa0.54□□□□□ -2.32
CNOT2-215ENST00000548863 KIF21BO75037 1637 aa0.53□□□□□ -2.33
CNOT2-215ENST00000548863 POLQO75417 2590 aa0.52□□□□□ -2.33
CNOT2-215ENST00000548863 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
CNOT2-215ENST00000548863 F8P00451 2351 aa0.52□□□□□ -2.33
CNOT2-215ENST00000548863 GVINP1Q7Z2Y8 2422 aa0.52□□□□□ -2.33
CNOT2-215ENST00000548863 SNRPGP62308 76 aaKnown RBP0.52□□□□□ -2.33
CNOT2-215ENST00000548863 WT1-ASQ06250 92 aa0.52□□□□□ -2.33
CNOT2-215ENST00000548863 DEFB109BQ30KR1 87 aa0.52□□□□□ -2.33
CNOT2-215ENST00000548863 BPTFQ12830 3046 aa0.51□□□□□ -2.33
CNOT2-215ENST00000548863 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
CNOT2-215ENST00000548863 NDUFA1O15239 70 aa0.51□□□□□ -2.33
CNOT2-215ENST00000548863 WFDC10BQ8IUB3 73 aa0.51□□□□□ -2.33
CNOT2-215ENST00000548863 ZNF292O60281 2723 aa0.51□□□□□ -2.33
CNOT2-215ENST00000548863 KNL1Q8NG31 2342 aa0.5□□□□□ -2.33
CNOT2-215ENST00000548863 MEGF8Q7Z7M0 2845 aa0.5□□□□□ -2.33
CNOT2-215ENST00000548863 ABCA12Q86UK0 2595 aa0.5□□□□□ -2.33
CNOT2-215ENST00000548863 H3BUA1 57 aa0.5□□□□□ -2.33
CNOT2-215ENST00000548863 KAAG1Q9UBP8 84 aa0.5□□□□□ -2.33
CNOT2-215ENST00000548863 PRLHP81277 87 aa0.49□□□□□ -2.33
CNOT2-215ENST00000548863 SPINK6Q6UWN8 80 aa0.49□□□□□ -2.33
CNOT2-215ENST00000548863 DEFB106AQ8N104 65 aa0.49□□□□□ -2.33
CNOT2-215ENST00000548863 S4R3F8 94 aa0.49□□□□□ -2.33
CNOT2-215ENST00000548863 PIEZO1Q92508 2521 aa0.49□□□□□ -2.33
CNOT2-215ENST00000548863 ABCA2Q9BZC7 2435 aa0.49□□□□□ -2.33
CNOT2-215ENST00000548863 AKAP6Q13023 2319 aa0.49□□□□□ -2.33
CNOT2-215ENST00000548863 PDE4DIPQ5VU43 2346 aa0.48□□□□□ -2.33
CNOT2-215ENST00000548863 TPRP12270 2363 aaKnown RBP0.48□□□□□ -2.33
CNOT2-215ENST00000548863 KMT2DO14686 5537 aa0.48□□□□□ -2.33
CNOT2-215ENST00000548863 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
CNOT2-215ENST00000548863 KRTAP19-3Q7Z4W3 81 aa0.47□□□□□ -2.33
CNOT2-215ENST00000548863 DUOX1Q9NRD9 1551 aa0.47□□□□□ -2.33
CNOT2-215ENST00000548863 IGF2RP11717 2491 aa0.47□□□□□ -2.33
CNOT2-215ENST00000548863 PCNX1Q96RV3 2341 aa0.47□□□□□ -2.33
CNOT2-215ENST00000548863 UNC79Q9P2D8 2635 aa0.46□□□□□ -2.34
CNOT2-215ENST00000548863 IGLV5-48A0A075B6I7 105 aa0.46□□□□□ -2.34
CNOT2-215ENST00000548863 DEFB131AP59861 70 aa0.46□□□□□ -2.34
CNOT2-215ENST00000548863 CLTCL1P53675 1640 aa0.46□□□□□ -2.34
CNOT2-215ENST00000548863 MMP24-AS1A0A0U1RRL7 71 aa0.45□□□□□ -2.34
CNOT2-215ENST00000548863 H0YGG7 62 aa0.45□□□□□ -2.34
CNOT2-215ENST00000548863 SPINK1P00995 79 aa0.45□□□□□ -2.34
CNOT2-215ENST00000548863 DEFB135Q30KP9 77 aa0.45□□□□□ -2.34
CNOT2-215ENST00000548863 SMR3AQ99954 134 aa0.45□□□□□ -2.34
CNOT2-215ENST00000548863 NOP10Q9NPE3 64 aaKnown RBP0.45□□□□□ -2.34
CNOT2-215ENST00000548863 SPTA1P02549 2419 aa0.45□□□□□ -2.34
CNOT2-215ENST00000548863 MROH2BQ7Z745 1585 aa0.45□□□□□ -2.34
CNOT2-215ENST00000548863 CSPG4Q6UVK1 2322 aa0.44□□□□□ -2.34
CNOT2-215ENST00000548863 DSPP15924 2871 aaKnown RBP0.44□□□□□ -2.34
CNOT2-215ENST00000548863 ALMS1Q8TCU4 4167 aa0.44□□□□□ -2.34
CNOT2-215ENST00000548863 ATRQ13535 2644 aa0.44□□□□□ -2.34
CNOT2-215ENST00000548863 REV3LO60673 3130 aa0.44□□□□□ -2.34
CNOT2-215ENST00000548863 CELSR2Q9HCU4 2923 aa0.44□□□□□ -2.34
CNOT2-215ENST00000548863 CHD9Q3L8U1 2897 aa0.44□□□□□ -2.34
CNOT2-215ENST00000548863 TRANK1O15050 2925 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 CHD6Q8TD26 2715 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 M0R2T5 61 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 KRTAP2-3P0C7H8 128 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 KRTAP2-4Q9BYR9 128 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 KRTAP2-1Q9BYU5 128 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 HECTD1Q9ULT8 2610 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 GCC2Q8IWJ2 1684 aa0.43□□□□□ -2.34
CNOT2-215ENST00000548863 TENM4Q6N022 2769 aa0.42□□□□□ -2.34
CNOT2-215ENST00000548863 U3KQA8 63 aa0.42□□□□□ -2.34
CNOT2-215ENST00000548863 M0QY20 66 aa0.41□□□□□ -2.34
CNOT2-215ENST00000548863 POLR2KP53803 58 aaKnown RBP0.41□□□□□ -2.34
CNOT2-215ENST00000548863 RPL39P62891 51 aaKnown RBP0.41□□□□□ -2.34
CNOT2-215ENST00000548863 CEP290O15078 2479 aa0.41□□□□□ -2.34
CNOT2-215ENST00000548863 PKD1L2Q7Z442 2459 aa0.41□□□□□ -2.34
CNOT2-215ENST00000548863 CHD8Q9HCK8 2581 aa0.41□□□□□ -2.34
CNOT2-215ENST00000548863 SYNE2Q8WXH0 6885 aaKnown RBP0.4□□□□□ -2.35
CNOT2-215ENST00000548863 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
CNOT2-215ENST00000548863 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
CNOT2-215ENST00000548863 VWFP04275 2813 aa0.4□□□□□ -2.35
CNOT2-215ENST00000548863 NCOR1O75376 2440 aa0.39□□□□□ -2.35
CNOT2-215ENST00000548863 CREBBPQ92793 2442 aa0.39□□□□□ -2.35
CNOT2-215ENST00000548863 CSMD3Q7Z407 3707 aa0.39□□□□□ -2.35
CNOT2-215ENST00000548863 AKAP13Q12802 2813 aa0.39□□□□□ -2.35
CNOT2-215ENST00000548863 RPL39LQ96EH5 51 aaKnown RBP0.39□□□□□ -2.35
CNOT2-215ENST00000548863 EP300Q09472 2414 aaPredicted RBP0.39□□□□□ -2.35
CNOT2-215ENST00000548863 ZFYVE26Q68DK2 2539 aa0.39□□□□□ -2.35
CNOT2-215ENST00000548863 PTPN13Q12923 2485 aa0.39□□□□□ -2.35
CNOT2-215ENST00000548863 MAP1BP46821 2468 aaKnown RBP0.38□□□□□ -2.35
CNOT2-215ENST00000548863 A8MTW9 85 aa0.38□□□□□ -2.35
CNOT2-215ENST00000548863 PRM1P04553 51 aa0.38□□□□□ -2.35
CNOT2-215ENST00000548863 CLPSL2Q6UWE3 100 aa0.38□□□□□ -2.35
CNOT2-215ENST00000548863 APCP25054 2843 aa0.38□□□□□ -2.35
CNOT2-215ENST00000548863 LEAP2Q969E1 77 aa0.37□□□□□ -2.35
CNOT2-215ENST00000548863 ARHGAP5-AS1Q96IT6 56 aa0.37□□□□□ -2.35
CNOT2-215ENST00000548863 PRRC2CQ9Y520 2896 aaKnown RBP0.36□□□□□ -2.35
CNOT2-215ENST00000548863 CACNA1AO00555 2505 aa0.36□□□□□ -2.35
CNOT2-215ENST00000548863 C9orf92A6NGG3 77 aa0.36□□□□□ -2.35
CNOT2-215ENST00000548863 M0QZ58 72 aa0.36□□□□□ -2.35
CNOT2-215ENST00000548863 TOMM7Q9P0U1 55 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms