RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 AEBP2Q6ZN18 517 aaPredicted RBP33.09■■■□□ 2.89
CNOT2-215ENST00000548863 CHIC1Q5VXU3 224 aa31.61■■■□□ 2.65
CNOT2-215ENST00000548863 SENP3Q9H4L4 574 aaPredicted RBP28.26■■■□□ 2.11
CNOT2-215ENST00000548863 PHF23Q9BUL5 403 aaPredicted RBP27.89■■■□□ 2.06
CNOT2-215ENST00000548863 FOXD1Q16676 465 aa26.28■■□□□ 1.8
CNOT2-215ENST00000548863 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
CNOT2-215ENST00000548863 PPP6R1Q9UPN7 881 aa24.68■■□□□ 1.54
CNOT2-215ENST00000548863 MSH5O43196 834 aa24.59■■□□□ 1.53
CNOT2-215ENST00000548863 ADRA2BP18089 450 aa24.57■■□□□ 1.52
CNOT2-215ENST00000548863 PIAS4Q8N2W9 510 aaPredicted RBP24.56■■□□□ 1.52
CNOT2-215ENST00000548863 POTEDQ86YR6 584 aa23.69■■□□□ 1.38
CNOT2-215ENST00000548863 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
CNOT2-215ENST00000548863 MAPK8IP2Q13387 824 aaPredicted RBP22.52■■□□□ 1.2
CNOT2-215ENST00000548863 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
CNOT2-215ENST00000548863 PPP4R3CPQ6ZMV5 832 aa22.19■■□□□ 1.14
CNOT2-215ENST00000548863 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
CNOT2-215ENST00000548863 HOXD11P31277 338 aaPredicted RBP21.7■■□□□ 1.06
CNOT2-215ENST00000548863 RNF216Q9NWF9 866 aaPredicted RBP21.57■■□□□ 1.04
CNOT2-215ENST00000548863 NCBP3Q53F19 620 aaKnown RBP21.42■■□□□ 1.02
CNOT2-215ENST00000548863 DCAF8L1A6NGE4 600 aa21.35■■□□□ 1.01
CNOT2-215ENST00000548863 NPM3O75607 178 aaKnown RBP21.08■□□□□ 0.97
CNOT2-215ENST00000548863 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
CNOT2-215ENST00000548863 RNF39Q9H2S5 420 aa20.99■□□□□ 0.95
CNOT2-215ENST00000548863 CACNB1Q02641 598 aaPredicted RBP20.93■□□□□ 0.94
CNOT2-215ENST00000548863 KCNA4P22459 653 aa20.77■□□□□ 0.92
CNOT2-215ENST00000548863 C1QBPQ07021 282 aaKnown RBP20.72■□□□□ 0.91
CNOT2-215ENST00000548863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.58■□□□□ 0.89
CNOT2-215ENST00000548863 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
CNOT2-215ENST00000548863 SLC4A2P04920 1241 aa20.1■□□□□ 0.81
CNOT2-215ENST00000548863 SPINK5Q9NQ38 1064 aaPredicted RBP19.82■□□□□ 0.76
CNOT2-215ENST00000548863 CAPN15O75808 1086 aa19.75■□□□□ 0.75
CNOT2-215ENST00000548863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
CNOT2-215ENST00000548863 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
CNOT2-215ENST00000548863 APLP2Q06481 763 aa19.71■□□□□ 0.75
CNOT2-215ENST00000548863 DSG3P32926 999 aa19.68■□□□□ 0.74
CNOT2-215ENST00000548863 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CNOT2-215ENST00000548863 SAMD1Q6SPF0 538 aaPredicted RBP19.61■□□□□ 0.73
CNOT2-215ENST00000548863 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
CNOT2-215ENST00000548863 MYCNP04198 464 aaPredicted RBP19.51■□□□□ 0.71
CNOT2-215ENST00000548863 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
CNOT2-215ENST00000548863 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
CNOT2-215ENST00000548863 ABCB7O75027 752 aa19.28■□□□□ 0.68
CNOT2-215ENST00000548863 ZBTB22O15209 634 aa19.1■□□□□ 0.65
CNOT2-215ENST00000548863 POLA2Q14181 598 aa19.04■□□□□ 0.64
CNOT2-215ENST00000548863 ATF5Q9Y2D1 282 aaPredicted RBP18.99■□□□□ 0.63
CNOT2-215ENST00000548863 ATXN8OSP0DMR3 200 aa18.86■□□□□ 0.61
CNOT2-215ENST00000548863 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
CNOT2-215ENST00000548863 ZBTB12Q9Y330 459 aaPredicted RBP18.73■□□□□ 0.59
CNOT2-215ENST00000548863 POTEHQ6S545 545 aa18.6■□□□□ 0.57
CNOT2-215ENST00000548863 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
CNOT2-215ENST00000548863 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
CNOT2-215ENST00000548863 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
CNOT2-215ENST00000548863 CHRDL2Q6WN34 429 aa18.3■□□□□ 0.52
CNOT2-215ENST00000548863 FBLN2P98095 1184 aa18.28■□□□□ 0.52
CNOT2-215ENST00000548863 REM2Q8IYK8 340 aaPredicted RBP18.2■□□□□ 0.5
CNOT2-215ENST00000548863 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
CNOT2-215ENST00000548863 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
CNOT2-215ENST00000548863 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
CNOT2-215ENST00000548863 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
CNOT2-215ENST00000548863 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
CNOT2-215ENST00000548863 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
CNOT2-215ENST00000548863 SSUH2Q9Y2M2 353 aa17.93■□□□□ 0.46
CNOT2-215ENST00000548863 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
CNOT2-215ENST00000548863 PIP4P2Q8N4L2 257 aa17.88■□□□□ 0.45
CNOT2-215ENST00000548863 FXR2P51116 673 aaKnown RBP eCLIP17.85■□□□□ 0.45
CNOT2-215ENST00000548863 SPDYE1Q8NFV5 336 aaPredicted RBP17.77■□□□□ 0.44
CNOT2-215ENST00000548863 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
CNOT2-215ENST00000548863 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
CNOT2-215ENST00000548863 SP7Q8TDD2 431 aaPredicted RBP17.51■□□□□ 0.39
CNOT2-215ENST00000548863 PRKAR2AP13861 404 aaKnown RBP17.5■□□□□ 0.39
CNOT2-215ENST00000548863 HAX1O00165 279 aa17.49■□□□□ 0.39
CNOT2-215ENST00000548863 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
CNOT2-215ENST00000548863 SPDYE4A6NLX3 237 aa17.36■□□□□ 0.37
CNOT2-215ENST00000548863 EVX2Q03828 476 aa17.29■□□□□ 0.36
CNOT2-215ENST00000548863 CHADLQ6NUI6 762 aa17.29■□□□□ 0.36
CNOT2-215ENST00000548863 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
CNOT2-215ENST00000548863 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
CNOT2-215ENST00000548863 FARP1Q9Y4F1 1045 aaPredicted RBP17.13■□□□□ 0.33
CNOT2-215ENST00000548863 PROM2Q8N271 834 aa17.07■□□□□ 0.32
CNOT2-215ENST00000548863 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
CNOT2-215ENST00000548863 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
CNOT2-215ENST00000548863 GABBR2O75899 941 aa16.94■□□□□ 0.3
CNOT2-215ENST00000548863 CLCN6P51797 869 aa16.87■□□□□ 0.29
CNOT2-215ENST00000548863 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
CNOT2-215ENST00000548863 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
CNOT2-215ENST00000548863 ZNF579Q8NAF0 562 aaKnown RBP16.75■□□□□ 0.27
CNOT2-215ENST00000548863 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
CNOT2-215ENST00000548863 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
CNOT2-215ENST00000548863 FKBP8Q14318 412 aa16.6■□□□□ 0.25
CNOT2-215ENST00000548863 POTEIP0CG38 1075 aa16.58■□□□□ 0.24
CNOT2-215ENST00000548863 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
CNOT2-215ENST00000548863 MIER1Q8N108 512 aa16.54■□□□□ 0.24
CNOT2-215ENST00000548863 DCBLD2Q96PD2 775 aa16.49■□□□□ 0.23
CNOT2-215ENST00000548863 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
CNOT2-215ENST00000548863 PHF12Q96QT6 1004 aa16.48■□□□□ 0.23
CNOT2-215ENST00000548863 LHX8Q68G74 356 aa16.42■□□□□ 0.22
CNOT2-215ENST00000548863 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
CNOT2-215ENST00000548863 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
CNOT2-215ENST00000548863 TSPYL2Q9H2G4 693 aaPredicted RBP16.37■□□□□ 0.21
CNOT2-215ENST00000548863 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms