RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 QSER1Q2KHR3 1735 aa-0.63□□□□□ -2.51
RPAP3-206ENST00000548296 D6R8Y8 96 aa-0.63□□□□□ -2.51
RPAP3-206ENST00000548296 F8WEM9 126 aa-0.63□□□□□ -2.51
RPAP3-206ENST00000548296 LELP1Q5T871 98 aa-0.63□□□□□ -2.51
RPAP3-206ENST00000548296 MUSTN1Q8IVN3 82 aa-0.63□□□□□ -2.51
RPAP3-206ENST00000548296 RELNP78509 3460 aa-0.63□□□□□ -2.51
RPAP3-206ENST00000548296 SPTAN1Q13813 2472 aaKnown RBP-0.63□□□□□ -2.51
RPAP3-206ENST00000548296 TROQ12816 1431 aaPredicted RBP-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 CICQ96RK0 1608 aaPredicted RBP-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 ABCC10Q5T3U5 1492 aa-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 CCL22O00626 93 aa-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 LEPROTL1O95214 131 aa-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 C4AP0C0L4 1744 aa-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 C4BP0C0L5 1744 aa-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 PKD1L3Q7Z443 1732 aa-0.64□□□□□ -2.51
RPAP3-206ENST00000548296 UBR3Q6ZT12 1888 aa-0.65□□□□□ -2.51
RPAP3-206ENST00000548296 RGPD3A6NKT7 1758 aaPredicted RBP-0.65□□□□□ -2.51
RPAP3-206ENST00000548296 RGPD4Q7Z3J3 1758 aa-0.65□□□□□ -2.51
RPAP3-206ENST00000548296 DNAH10Q8IVF4 4471 aa-0.65□□□□□ -2.51
RPAP3-206ENST00000548296 SPTY2D1-AS1A0A0U1RR47 76 aa-0.65□□□□□ -2.51
RPAP3-206ENST00000548296 CLIP1P30622 1438 aa-0.65□□□□□ -2.51
RPAP3-206ENST00000548296 TIAM2Q8IVF5 1701 aa-0.66□□□□□ -2.51
RPAP3-206ENST00000548296 H0YGG7 62 aa-0.66□□□□□ -2.52
RPAP3-206ENST00000548296 IGLC2P0DOY2 106 aa-0.66□□□□□ -2.52
RPAP3-206ENST00000548296 IGLC3P0DOY3 106 aa-0.66□□□□□ -2.52
RPAP3-206ENST00000548296 AKAP12Q02952 1782 aa-0.66□□□□□ -2.52
RPAP3-206ENST00000548296 PREX1Q8TCU6 1659 aa-0.66□□□□□ -2.52
RPAP3-206ENST00000548296 RGPD8O14715 1765 aaPredicted RBP-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 RGPD5Q99666 1765 aa-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 S100A8P05109 93 aa-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 WFDC13Q8IUB5 93 aa-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 CDKN2A-AS1Q9UH64 79 aa-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 PCNTO95613 3336 aa-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 MUC3AQ02505 3323 aa-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 ATP10BO94823 1461 aa-0.67□□□□□ -2.52
RPAP3-206ENST00000548296 CEP350Q5VT06 3117 aa-0.68□□□□□ -2.52
RPAP3-206ENST00000548296 SZT2Q5T011 3432 aa-0.68□□□□□ -2.52
RPAP3-206ENST00000548296 HIGD1BQ9P298 99 aa-0.68□□□□□ -2.52
RPAP3-206ENST00000548296 UBE2D4Q9Y2X8 147 aa-0.68□□□□□ -2.52
RPAP3-206ENST00000548296 CFAP47Q6ZTR5 3102 aa-0.68□□□□□ -2.52
RPAP3-206ENST00000548296 FRYQ5TBA9 3013 aa-0.68□□□□□ -2.52
RPAP3-206ENST00000548296 MKI67P46013 3256 aaKnown RBP-0.69□□□□□ -2.52
RPAP3-206ENST00000548296 CEP250Q9BV73 2442 aa-0.69□□□□□ -2.52
RPAP3-206ENST00000548296 C9orf92A6NGG3 77 aa-0.69□□□□□ -2.52
RPAP3-206ENST00000548296 H3BNG1 76 aa-0.69□□□□□ -2.52
RPAP3-206ENST00000548296 HEPN1Q6WQI6 88 aa-0.69□□□□□ -2.52
RPAP3-206ENST00000548296 SNHG12Q9BXW3 62 aa-0.69□□□□□ -2.52
RPAP3-206ENST00000548296 C5orf42Q9H799 3197 aa-0.69□□□□□ -2.52
RPAP3-206ENST00000548296 SCN11AQ9UI33 1791 aa-0.7□□□□□ -2.52
RPAP3-206ENST00000548296 ALKQ9UM73 1620 aa-0.7□□□□□ -2.52
RPAP3-206ENST00000548296 MT1BP07438 61 aa-0.7□□□□□ -2.52
RPAP3-206ENST00000548296 DMDP11532 3685 aa-0.71□□□□□ -2.52
RPAP3-206ENST00000548296 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.71□□□□□ -2.52
RPAP3-206ENST00000548296 SUPT6HQ7KZ85 1726 aaKnown RBP-0.71□□□□□ -2.52
RPAP3-206ENST00000548296 GYPAP02724 150 aa-0.71□□□□□ -2.52
RPAP3-206ENST00000548296 PKIAP61925 76 aa-0.71□□□□□ -2.52
RPAP3-206ENST00000548296 MT1HP80294 61 aa-0.71□□□□□ -2.52
RPAP3-206ENST00000548296 RGPD1P0DJD0 1748 aa-0.72□□□□□ -2.52
RPAP3-206ENST00000548296 MAP3K1Q13233 1512 aa-0.72□□□□□ -2.52
RPAP3-206ENST00000548296 MT1HL1P0DM35 61 aa-0.72□□□□□ -2.52
RPAP3-206ENST00000548296 ANKRD50Q9ULJ7 1429 aa-0.72□□□□□ -2.53
RPAP3-206ENST00000548296 LTN1O94822 1766 aa-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 MAGI2Q86UL8 1455 aa-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 PLXNC1O60486 1568 aa-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 MT1GP13640 62 aa-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 NMSQ5H8A3 153 aa-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 COX6B2Q6YFQ2 88 aa-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 POLR1AO95602 1720 aaPredicted RBP-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 VCANP13611 3396 aa-0.73□□□□□ -2.53
RPAP3-206ENST00000548296 NESP48681 1621 aa-0.74□□□□□ -2.53
RPAP3-206ENST00000548296 MYO3AQ8NEV4 1616 aa-0.74□□□□□ -2.53
RPAP3-206ENST00000548296 UBR1Q8IWV7 1749 aa-0.74□□□□□ -2.53
RPAP3-206ENST00000548296 HMGN2P05204 90 aaKnown RBP-0.74□□□□□ -2.53
RPAP3-206ENST00000548296 DEFA5Q01523 94 aa-0.74□□□□□ -2.53
RPAP3-206ENST00000548296 PRUNE2Q8WUY3 3088 aa-0.74□□□□□ -2.53
RPAP3-206ENST00000548296 WIZO95785 1651 aa-0.75□□□□□ -2.53
RPAP3-206ENST00000548296 MT1MQ8N339 61 aa-0.75□□□□□ -2.53
RPAP3-206ENST00000548296 C20orf78Q9BR46 151 aa-0.75□□□□□ -2.53
RPAP3-206ENST00000548296 LRRC9Q6ZRR7 1453 aa-0.75□□□□□ -2.53
RPAP3-206ENST00000548296 USP32Q8NFA0 1604 aa-0.75□□□□□ -2.53
RPAP3-206ENST00000548296 RANBP2P49792 3224 aaKnown RBP-0.76□□□□□ -2.53
RPAP3-206ENST00000548296 ATMQ13315 3056 aa-0.76□□□□□ -2.53
RPAP3-206ENST00000548296 NDUFA3O95167 84 aa-0.76□□□□□ -2.53
RPAP3-206ENST00000548296 SMIM11AP58511 58 aa-0.76□□□□□ -2.53
RPAP3-206ENST00000548296 MT1XP80297 61 aa-0.76□□□□□ -2.53
RPAP3-206ENST00000548296 KRTAP19-5Q3LI72 72 aa-0.76□□□□□ -2.53
RPAP3-206ENST00000548296 CEP162Q5TB80 1403 aa-0.76□□□□□ -2.53
RPAP3-206ENST00000548296 DOT1LQ8TEK3 1739 aa-0.77□□□□□ -2.53
RPAP3-206ENST00000548296 COX7BP24311 80 aa-0.77□□□□□ -2.53
RPAP3-206ENST00000548296 KRTAP8-1Q8IUC2 63 aa-0.77□□□□□ -2.53
RPAP3-206ENST00000548296 CDH23Q9H251 3354 aa-0.77□□□□□ -2.53
RPAP3-206ENST00000548296 SPTBN5Q9NRC6 3674 aaKnown RBP-0.77□□□□□ -2.53
RPAP3-206ENST00000548296 DEPDC5O75140 1603 aa-0.78□□□□□ -2.53
RPAP3-206ENST00000548296 LRRC7Q96NW7 1537 aa-0.78□□□□□ -2.53
RPAP3-206ENST00000548296 MT2AP02795 61 aa-0.78□□□□□ -2.53
RPAP3-206ENST00000548296 S4R3F8 94 aa-0.78□□□□□ -2.53
RPAP3-206ENST00000548296 NWD1Q149M9 1564 aa-0.79□□□□□ -2.54
RPAP3-206ENST00000548296 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.79□□□□□ -2.54
RPAP3-206ENST00000548296 ATP7BP35670 1465 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms