RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 KRTAP29-1A8MX34 341 aaPredicted RBP7.91□□□□□ -1.14
TSKU-203ENST00000527881 SPRR1AP35321 89 aa7.9□□□□□ -1.14
TSKU-203ENST00000527881 CNBPP62633 177 aaKnown RBP7.9□□□□□ -1.14
TSKU-203ENST00000527881 NOTCH2Q04721 2471 aa7.9□□□□□ -1.15
TSKU-203ENST00000527881 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.15
TSKU-203ENST00000527881 KRTAP10-3P60369 221 aa7.89□□□□□ -1.15
TSKU-203ENST00000527881 C9orf163Q8N9P6 203 aa7.89□□□□□ -1.15
TSKU-203ENST00000527881 SPINK7P58062 85 aa7.89□□□□□ -1.15
TSKU-203ENST00000527881 TEP1Q99973 2627 aaKnown RBP7.88□□□□□ -1.15
TSKU-203ENST00000527881 A8MWP4 228 aa7.88□□□□□ -1.15
TSKU-203ENST00000527881 HIVEP1P15822 2718 aa7.88□□□□□ -1.15
TSKU-203ENST00000527881 IGLV7-46A0A075B6I9 117 aa7.87□□□□□ -1.15
TSKU-203ENST00000527881 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
TSKU-203ENST00000527881 PKD1L1Q8TDX9 2849 aa7.86□□□□□ -1.15
TSKU-203ENST00000527881 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
TSKU-203ENST00000527881 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
TSKU-203ENST00000527881 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
TSKU-203ENST00000527881 LINC01556Q5JQF7 62 aa7.85□□□□□ -1.15
TSKU-203ENST00000527881 PRAC1Q96KF2 57 aa7.85□□□□□ -1.15
TSKU-203ENST00000527881 ATRQ13535 2644 aa7.84□□□□□ -1.15
TSKU-203ENST00000527881 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.15
TSKU-203ENST00000527881 LINC01558Q9Y6Z2 57 aa7.84□□□□□ -1.15
TSKU-203ENST00000527881 TLX1NBP0CAT3 122 aa7.84□□□□□ -1.16
TSKU-203ENST00000527881 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
TSKU-203ENST00000527881 ZNF469Q96JG9 3925 aaPredicted RBP7.82□□□□□ -1.16
TSKU-203ENST00000527881 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
TSKU-203ENST00000527881 DEFB131BA0A096LNP1 70 aa7.82□□□□□ -1.16
TSKU-203ENST00000527881 LINC00313P59037 77 aa7.8□□□□□ -1.16
TSKU-203ENST00000527881 USP24Q9UPU5 2620 aa7.79□□□□□ -1.16
TSKU-203ENST00000527881 UBR5O95071 2799 aaPredicted RBP7.79□□□□□ -1.16
TSKU-203ENST00000527881 H3BNG1 76 aa7.78□□□□□ -1.16
TSKU-203ENST00000527881 SMR3AQ99954 134 aa7.78□□□□□ -1.16
TSKU-203ENST00000527881 MMP24-AS1A0A0U1RRL7 71 aa7.78□□□□□ -1.16
TSKU-203ENST00000527881 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
TSKU-203ENST00000527881 HRES1P13985 223 aa7.77□□□□□ -1.17
TSKU-203ENST00000527881 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
TSKU-203ENST00000527881 PDZD2O15018 2839 aa7.76□□□□□ -1.17
TSKU-203ENST00000527881 IGHV6-1A0A0B4J1U7 121 aa7.75□□□□□ -1.17
TSKU-203ENST00000527881 CDK2AP2O75956 126 aa7.75□□□□□ -1.17
TSKU-203ENST00000527881 SRRM2Q9UQ35 2752 aaKnown RBP7.75□□□□□ -1.17
TSKU-203ENST00000527881 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
TSKU-203ENST00000527881 KRTAP1-1Q07627 177 aa7.74□□□□□ -1.17
TSKU-203ENST00000527881 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
TSKU-203ENST00000527881 TP53AIP1Q9HCN2 124 aa7.74□□□□□ -1.17
TSKU-203ENST00000527881 HELZ2Q9BYK8 2649 aaKnown RBP7.73□□□□□ -1.17
TSKU-203ENST00000527881 OTOGQ6ZRI0 2925 aa7.73□□□□□ -1.17
TSKU-203ENST00000527881 IGLV9-49A0A0B4J1Y8 123 aa7.72□□□□□ -1.17
TSKU-203ENST00000527881 DNAH10OSP0CZ25 163 aa7.72□□□□□ -1.17
TSKU-203ENST00000527881 MDFIQ99750 246 aa7.72□□□□□ -1.17
TSKU-203ENST00000527881 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.18
TSKU-203ENST00000527881 H3BS24 57 aa7.71□□□□□ -1.18
TSKU-203ENST00000527881 ITPR2Q14571 2701 aa7.69□□□□□ -1.18
TSKU-203ENST00000527881 PLAC8Q9NZF1 115 aa7.69□□□□□ -1.18
TSKU-203ENST00000527881 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
TSKU-203ENST00000527881 FASNP49327 2511 aaKnown RBP7.68□□□□□ -1.18
TSKU-203ENST00000527881 TENM3Q9P273 2699 aa7.68□□□□□ -1.18
TSKU-203ENST00000527881 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
TSKU-203ENST00000527881 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
TSKU-203ENST00000527881 FLNBO75369 2602 aaKnown RBP7.66□□□□□ -1.18
TSKU-203ENST00000527881 A0A1B0GU69 56 aa7.63□□□□□ -1.19
TSKU-203ENST00000527881 Q6ZR54 194 aa7.62□□□□□ -1.19
TSKU-203ENST00000527881 MRPL34Q9BQ48 92 aaKnown RBP7.62□□□□□ -1.19
TSKU-203ENST00000527881 K7EIL1 84 aa7.62□□□□□ -1.19
TSKU-203ENST00000527881 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
TSKU-203ENST00000527881 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
TSKU-203ENST00000527881 ACYP2P14621 99 aa7.6□□□□□ -1.19
TSKU-203ENST00000527881 A0A1B0GVX0 72 aa7.6□□□□□ -1.19
TSKU-203ENST00000527881 FBN1P35555 2871 aaKnown RBP7.59□□□□□ -1.19
TSKU-203ENST00000527881 INAFM1C9JVW0 142 aa7.59□□□□□ -1.2
TSKU-203ENST00000527881 SPRR1BP22528 89 aa7.58□□□□□ -1.2
TSKU-203ENST00000527881 MAST4O15021 2626 aa7.58□□□□□ -1.2
TSKU-203ENST00000527881 NOTCH1P46531 2555 aa7.57□□□□□ -1.2
TSKU-203ENST00000527881 PLA2G1BP04054 148 aaKnown RBP7.57□□□□□ -1.2
TSKU-203ENST00000527881 COL6A5A8TX70 2615 aa7.56□□□□□ -1.2
TSKU-203ENST00000527881 A0A087X002 238 aa7.55□□□□□ -1.2
TSKU-203ENST00000527881 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
TSKU-203ENST00000527881 TRRAPQ9Y4A5 3859 aa7.55□□□□□ -1.2
TSKU-203ENST00000527881 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
TSKU-203ENST00000527881 Q96NJ1 140 aa7.55□□□□□ -1.2
TSKU-203ENST00000527881 KRTAP10-11P60412 298 aa7.54□□□□□ -1.2
TSKU-203ENST00000527881 MIR22HGQ0VDD5 57 aa7.54□□□□□ -1.2
TSKU-203ENST00000527881 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
TSKU-203ENST00000527881 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
TSKU-203ENST00000527881 TENM2Q9NT68 2774 aa7.52□□□□□ -1.2
TSKU-203ENST00000527881 ASB16-AS1Q495Z4 193 aa7.51□□□□□ -1.21
TSKU-203ENST00000527881 Q5W150 140 aa7.51□□□□□ -1.21
TSKU-203ENST00000527881 UQCR11O14957 56 aa7.5□□□□□ -1.21
TSKU-203ENST00000527881 HECTD1Q9ULT8 2610 aa7.5□□□□□ -1.21
TSKU-203ENST00000527881 UBE2DNLQ8IWF7 75 aa7.5□□□□□ -1.21
TSKU-203ENST00000527881 ANAPC11Q9NYG5 84 aa7.49□□□□□ -1.21
TSKU-203ENST00000527881 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
TSKU-203ENST00000527881 ANK3Q12955 4377 aaKnown RBP7.48□□□□□ -1.21
TSKU-203ENST00000527881 RTL8CO15255 209 aa7.47□□□□□ -1.21
TSKU-203ENST00000527881 NBEAL1Q6ZS30 2694 aa7.47□□□□□ -1.21
TSKU-203ENST00000527881 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
TSKU-203ENST00000527881 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
TSKU-203ENST00000527881 C14orf177Q52M58 125 aa7.44□□□□□ -1.22
TSKU-203ENST00000527881 STAB1Q9NY15 2570 aa7.43□□□□□ -1.22
TSKU-203ENST00000527881 J3QKU1 62 aa7.41□□□□□ -1.22
TSKU-203ENST00000527881 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms