RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 CFAP54Q96N23 3096 aa3.15□□□□□ -1.91
PTPN13-209ENST00000511467 KRTAP10-11P60412 298 aa3.14□□□□□ -1.91
PTPN13-209ENST00000511467 NBEAQ8NFP9 2946 aa3.14□□□□□ -1.91
PTPN13-209ENST00000511467 GOLGB1Q14789 3259 aaKnown RBP3.14□□□□□ -1.91
PTPN13-209ENST00000511467 FAM218AQ96MZ4 157 aa3.14□□□□□ -1.91
PTPN13-209ENST00000511467 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
PTPN13-209ENST00000511467 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
PTPN13-209ENST00000511467 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
PTPN13-209ENST00000511467 KALRNO60229 2985 aa3.14□□□□□ -1.91
PTPN13-209ENST00000511467 Q75L30 129 aa3.13□□□□□ -1.91
PTPN13-209ENST00000511467 WDFY4Q6ZS81 3184 aa3.13□□□□□ -1.91
PTPN13-209ENST00000511467 MXRA5Q9NR99 2828 aa3.13□□□□□ -1.91
PTPN13-209ENST00000511467 H7BZZ5 65 aa3.12□□□□□ -1.91
PTPN13-209ENST00000511467 CASC10Q5T4H9 136 aa3.12□□□□□ -1.91
PTPN13-209ENST00000511467 TNRC18O15417 2968 aaPredicted RBP3.12□□□□□ -1.91
PTPN13-209ENST00000511467 SERTAD4-AS1Q5TG53 156 aa3.12□□□□□ -1.91
PTPN13-209ENST00000511467 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
PTPN13-209ENST00000511467 USP34Q70CQ2 3546 aa3.11□□□□□ -1.91
PTPN13-209ENST00000511467 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
PTPN13-209ENST00000511467 TENM3Q9P273 2699 aa3.1□□□□□ -1.91
PTPN13-209ENST00000511467 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
PTPN13-209ENST00000511467 Q6ZR54 194 aa3.1□□□□□ -1.91
PTPN13-209ENST00000511467 TACC2O95359 2948 aa3.1□□□□□ -1.91
PTPN13-209ENST00000511467 TGP01266 2768 aa3.09□□□□□ -1.91
PTPN13-209ENST00000511467 PCOTHQ58A44 107 aa3.09□□□□□ -1.91
PTPN13-209ENST00000511467 SRCAPQ6ZRS2 3230 aa3.09□□□□□ -1.91
PTPN13-209ENST00000511467 ZANQ9Y493 2812 aa3.09□□□□□ -1.92
PTPN13-209ENST00000511467 PCNTO95613 3336 aa3.09□□□□□ -1.92
PTPN13-209ENST00000511467 Q6ZSA8 131 aa3.09□□□□□ -1.92
PTPN13-209ENST00000511467 LCE6AA0A183 80 aa3.08□□□□□ -1.92
PTPN13-209ENST00000511467 ZCCHC13Q8WW36 166 aaKnown RBP3.08□□□□□ -1.92
PTPN13-209ENST00000511467 A0A087WVE0 104 aa3.08□□□□□ -1.92
PTPN13-209ENST00000511467 CHTF8P0CG12 524 aa3.08□□□□□ -1.92
PTPN13-209ENST00000511467 PSPHP1O15172 72 aa3.08□□□□□ -1.92
PTPN13-209ENST00000511467 LCA10Q71F78 164 aa3.08□□□□□ -1.92
PTPN13-209ENST00000511467 LINC00472Q9H8W2 130 aa3.07□□□□□ -1.92
PTPN13-209ENST00000511467 PRUNE2Q8WUY3 3088 aa3.07□□□□□ -1.92
PTPN13-209ENST00000511467 CELSR2Q9HCU4 2923 aa3.07□□□□□ -1.92
PTPN13-209ENST00000511467 HTTP42858 3142 aa3.07□□□□□ -1.92
PTPN13-209ENST00000511467 HRNRQ86YZ3 2850 aaPredicted RBP3.06□□□□□ -1.92
PTPN13-209ENST00000511467 M0QZ58 72 aa3.05□□□□□ -1.92
PTPN13-209ENST00000511467 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
PTPN13-209ENST00000511467 PRR4Q16378 134 aa3.04□□□□□ -1.92
PTPN13-209ENST00000511467 A0A1W2PNM2 257 aa3.04□□□□□ -1.92
PTPN13-209ENST00000511467 FAM168BA1KXE4 195 aa3.04□□□□□ -1.92
PTPN13-209ENST00000511467 A0A1B0GU33 70 aa3.03□□□□□ -1.92
PTPN13-209ENST00000511467 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
PTPN13-209ENST00000511467 ANAPC11Q9NYG5 84 aa3.02□□□□□ -1.93
PTPN13-209ENST00000511467 KRTAP4-16G5E9R7 235 aaPredicted RBP3.02□□□□□ -1.93
PTPN13-209ENST00000511467 DSCR10P59022 87 aa3.02□□□□□ -1.93
PTPN13-209ENST00000511467 S4R3F8 94 aa3.02□□□□□ -1.93
PTPN13-209ENST00000511467 A0A1W2PNN7 141 aa3.02□□□□□ -1.93
PTPN13-209ENST00000511467 PRB2P02812 416 aaPredicted RBP3.02□□□□□ -1.93
PTPN13-209ENST00000511467 VWFP04275 2813 aa3.01□□□□□ -1.93
PTPN13-209ENST00000511467 RANBP2P49792 3224 aaKnown RBP3.01□□□□□ -1.93
PTPN13-209ENST00000511467 PDZD2O15018 2839 aa3.01□□□□□ -1.93
PTPN13-209ENST00000511467 ASH1LQ9NR48 2969 aaKnown RBP3□□□□□ -1.93
PTPN13-209ENST00000511467 CRYBG3Q68DQ2 2970 aa3□□□□□ -1.93
PTPN13-209ENST00000511467 TENM2Q9NT68 2774 aa3□□□□□ -1.93
PTPN13-209ENST00000511467 DCHS2Q6V1P9 2916 aa3□□□□□ -1.93
PTPN13-209ENST00000511467 KRTAP26-1Q6PEX3 210 aa3□□□□□ -1.93
PTPN13-209ENST00000511467 CELSR1Q9NYQ6 3014 aa3□□□□□ -1.93
PTPN13-209ENST00000511467 MMP24-AS1A0A0U1RRL7 71 aa3□□□□□ -1.93
PTPN13-209ENST00000511467 Q9UF83 564 aa2.99□□□□□ -1.93
PTPN13-209ENST00000511467 DEFB116Q30KQ4 102 aa2.99□□□□□ -1.93
PTPN13-209ENST00000511467 COL12A1Q99715 3063 aa2.99□□□□□ -1.93
PTPN13-209ENST00000511467 TENM4Q6N022 2769 aa2.99□□□□□ -1.93
PTPN13-209ENST00000511467 DMXL2Q8TDJ6 3036 aa2.98□□□□□ -1.93
PTPN13-209ENST00000511467 EIF4EBP3O60516 100 aaPredicted RBP2.98□□□□□ -1.93
PTPN13-209ENST00000511467 LAMA1P25391 3075 aa2.98□□□□□ -1.93
PTPN13-209ENST00000511467 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
PTPN13-209ENST00000511467 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
PTPN13-209ENST00000511467 PRR26Q8N8Z3 221 aa2.97□□□□□ -1.93
PTPN13-209ENST00000511467 Q8N9P0 234 aaPredicted RBP2.97□□□□□ -1.93
PTPN13-209ENST00000511467 FBN2P35556 2912 aa2.96□□□□□ -1.94
PTPN13-209ENST00000511467 UTRNP46939 3433 aa2.96□□□□□ -1.94
PTPN13-209ENST00000511467 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
PTPN13-209ENST00000511467 H1FX-AS1Q4G0G2 97 aa2.94□□□□□ -1.94
PTPN13-209ENST00000511467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.94□□□□□ -1.94
PTPN13-209ENST00000511467 Q5W150 140 aa2.94□□□□□ -1.94
PTPN13-209ENST00000511467 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
PTPN13-209ENST00000511467 R4GN34 69 aa2.94□□□□□ -1.94
PTPN13-209ENST00000511467 ADGRG4Q8IZF6 3080 aa2.94□□□□□ -1.94
PTPN13-209ENST00000511467 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
PTPN13-209ENST00000511467 PANO1I0J062 215 aa2.93□□□□□ -1.94
PTPN13-209ENST00000511467 SPINK7P58062 85 aa2.92□□□□□ -1.94
PTPN13-209ENST00000511467 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
PTPN13-209ENST00000511467 KRTAP29-1A8MX34 341 aaPredicted RBP2.92□□□□□ -1.94
PTPN13-209ENST00000511467 Q5VSD8 79 aa2.92□□□□□ -1.94
PTPN13-209ENST00000511467 A8MUU9 505 aa2.91□□□□□ -1.94
PTPN13-209ENST00000511467 ROMO1P60602 79 aa2.91□□□□□ -1.94
PTPN13-209ENST00000511467 MKI67P46013 3256 aaKnown RBP2.91□□□□□ -1.94
PTPN13-209ENST00000511467 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
PTPN13-209ENST00000511467 Q6ZRN7 208 aaPredicted RBP2.91□□□□□ -1.94
PTPN13-209ENST00000511467 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
PTPN13-209ENST00000511467 PKD1L1Q8TDX9 2849 aa2.9□□□□□ -1.95
PTPN13-209ENST00000511467 C20orf166-AS1Q96NR2 134 aa2.9□□□□□ -1.95
PTPN13-209ENST00000511467 LINC01554Q52M75 96 aa2.9□□□□□ -1.95
PTPN13-209ENST00000511467 SPATA8Q6RVD6 105 aa2.89□□□□□ -1.95
PTPN13-209ENST00000511467 C9orf92A6NGG3 77 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms