RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 C5orf38Q86SI9 138 aa3.26□□□□□ -1.89
COL6A4P1-204ENST00000508169 CDKN2A-AS1Q9UH64 79 aa3.26□□□□□ -1.89
COL6A4P1-204ENST00000508169 LINC00959A0A1B0GUT2 108 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 A6NED7 52 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 UBE2BP63146 152 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 COX6A2Q02221 97 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 SS18Q15532 418 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 MUC7Q8TAX7 377 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 DEFB104AQ8WTQ1 72 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 ZNF625Q96I27 306 aaPredicted RBP3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 B9D2Q9BPU9 175 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 TTTY13Q9BZ97 58 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 NHP2Q9NX24 153 aaKnown RBP3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 STAB2Q8WWQ8 2551 aa3.25□□□□□ -1.89
COL6A4P1-204ENST00000508169 TRAV10A0A0B4J240 114 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 LOC107984156A0A0G2JMH3 177 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 DEFB4AO15263 64 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 IGHV3-30P01768 117 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 IGHV3-30-5P0DP03 117 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 TSPEAR-AS2P59090 65 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 CIRBPQ14011 172 aaKnown RBP3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 ARL17AQ8IVW1 177 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 UPK3BQ9BT76 320 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 NDUFA12Q9UI09 145 aa3.24□□□□□ -1.89
COL6A4P1-204ENST00000508169 DEFB131BA0A096LNP1 70 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 FXYD2P54710 66 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 LINC00313P59037 77 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 HIST1H4AP62805 103 aaKnown RBP3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 COX17Q14061 63 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 LINC00643Q86TS7 51 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 Q8IZM0 81 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 LINC00588Q9Y4M8 146 aa3.23□□□□□ -1.89
COL6A4P1-204ENST00000508169 IBA57-AS1B1ANH7 110 aa3.22□□□□□ -1.89
COL6A4P1-204ENST00000508169 MIAQ16674 131 aa3.22□□□□□ -1.89
COL6A4P1-204ENST00000508169 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
COL6A4P1-204ENST00000508169 PHF5AQ7RTV0 110 aaKnown RBP3.22□□□□□ -1.89
COL6A4P1-204ENST00000508169 LINC00269Q8N2A0 174 aa3.22□□□□□ -1.89
COL6A4P1-204ENST00000508169 LINC01600Q96MT4 127 aa3.22□□□□□ -1.89
COL6A4P1-204ENST00000508169 IGHV3-64A0A075B6Q5 118 aa3.21□□□□□ -1.9
COL6A4P1-204ENST00000508169 FUSP35637 526 aaKnown RBP eCLIP3.21□□□□□ -1.9
COL6A4P1-204ENST00000508169 RBM3P98179 157 aaKnown RBP3.21□□□□□ -1.9
COL6A4P1-204ENST00000508169 ESRGQ1W209 222 aa3.21□□□□□ -1.9
COL6A4P1-204ENST00000508169 DEFB121Q5J5C9 76 aa3.21□□□□□ -1.9
COL6A4P1-204ENST00000508169 ENHOQ6UWT2 76 aa3.21□□□□□ -1.9
COL6A4P1-204ENST00000508169 COX7B2Q8TF08 81 aa3.21□□□□□ -1.9
COL6A4P1-204ENST00000508169 GVQW2A0A096LPI5 108 aaPredicted RBP3.2□□□□□ -1.9
COL6A4P1-204ENST00000508169 SLC25A20O43772 301 aa3.2□□□□□ -1.9
COL6A4P1-204ENST00000508169 ANGP03950 147 aaKnown RBP3.2□□□□□ -1.9
COL6A4P1-204ENST00000508169 CCKP06307 115 aa3.2□□□□□ -1.9
COL6A4P1-204ENST00000508169 KRTAP26-1Q6PEX3 210 aa3.2□□□□□ -1.9
COL6A4P1-204ENST00000508169 MUSTN1Q8IVN3 82 aa3.2□□□□□ -1.9
COL6A4P1-204ENST00000508169 PRO1854Q9UHT4 67 aa3.2□□□□□ -1.9
COL6A4P1-204ENST00000508169 HUWE1Q7Z6Z7 4374 aaKnown RBP3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 TRBV30A0A0K0K1B3 111 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 PSCAO43653 123 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 NDUFC1O43677 76 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 HTN3P15516 51 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 CCL18P55774 89 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 S100A7L2Q5SY68 101 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 LINC00308Q8TCZ7 52 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 CYSTM1Q9H1C7 97 aa3.19□□□□□ -1.9
COL6A4P1-204ENST00000508169 A0A1B0GU33 70 aa3.18□□□□□ -1.9
COL6A4P1-204ENST00000508169 IGHV3-33P01772 117 aa3.18□□□□□ -1.9
COL6A4P1-204ENST00000508169 XCL1P47992 114 aa3.18□□□□□ -1.9
COL6A4P1-204ENST00000508169 COL7A1Q02388 2944 aa3.18□□□□□ -1.9
COL6A4P1-204ENST00000508169 CRPP02741 224 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 LINC01554Q52M75 96 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 DIRC1Q969H9 104 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 APLNQ9ULZ1 77 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 DNAH9Q9NYC9 4486 aa3.17□□□□□ -1.9
COL6A4P1-204ENST00000508169 TRAV13-2A0A0B4J235 113 aa3.16□□□□□ -1.9
COL6A4P1-204ENST00000508169 IGKV3OR2-268A0A0C4DH90 116 aa3.16□□□□□ -1.9
COL6A4P1-204ENST00000508169 NUPR2A6NF83 97 aa3.16□□□□□ -1.9
COL6A4P1-204ENST00000508169 SOSTDC1Q6X4U4 206 aa3.16□□□□□ -1.9
COL6A4P1-204ENST00000508169 IGLV10-54A0A075B6I4 117 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 TRBV10-2A0A0K0K1G8 114 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 BCE1O60756 84 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 COX6CP09669 75 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 RPL28P46779 137 aaKnown RBP3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 ATXN8Q156A1 80 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 ATP11AUNQ6ZP68 121 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 SCXQ7RTU7 201 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 TOMM7Q9P0U1 55 aa3.15□□□□□ -1.91
COL6A4P1-204ENST00000508169 LECT2O14960 151 aa3.14□□□□□ -1.91
COL6A4P1-204ENST00000508169 LINC00158P58513 81 aa3.14□□□□□ -1.91
COL6A4P1-204ENST00000508169 KRTAP10-1P60331 282 aa3.14□□□□□ -1.91
COL6A4P1-204ENST00000508169 SPAG11BQ08648 103 aa3.14□□□□□ -1.91
COL6A4P1-204ENST00000508169 CLEC2BQ92478 149 aa3.14□□□□□ -1.91
COL6A4P1-204ENST00000508169 MEGF8Q7Z7M0 2845 aa3.14□□□□□ -1.91
COL6A4P1-204ENST00000508169 DYNC2H1Q8NCM8 4307 aaKnown RBP3.13□□□□□ -1.91
COL6A4P1-204ENST00000508169 H0YGX0 51 aa3.13□□□□□ -1.91
COL6A4P1-204ENST00000508169 H7BZZ5 65 aa3.13□□□□□ -1.91
COL6A4P1-204ENST00000508169 Q1T7F1 81 aa3.13□□□□□ -1.91
COL6A4P1-204ENST00000508169 CLPSL2Q6UWE3 100 aa3.13□□□□□ -1.91
COL6A4P1-204ENST00000508169 C2orf82Q6UX34 121 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms